LOCUS       NM_001399152            4384 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus SPATA31 subfamily F member 1 (Spata31f1), mRNA.
ACCESSION   NM_001399152 XM_006238118
VERSION     NM_001399152.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4384)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jan 4, 2022 this sequence version replaced XM_006238118.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.27293.1,
                                           SRR26360181.733188.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-362               JAXUCZ010000005.1  61867363-61867724   c
            363-408             JAXUCZ010000005.1  61866709-61866754   c
            409-469             JAXUCZ010000005.1  61866161-61866221   c
            470-4384            JAXUCZ010000005.1  61861587-61865501   c
FEATURES             Location/Qualifiers
     source          1..4384
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q22"
     gene            1..4384
                     /gene="Spata31f1"
                     /gene_synonym="Fam205a"
                     /note="SPATA31 subfamily F member 1"
                     /db_xref="GeneID:100361292"
                     /db_xref="RGD:2320471"
     exon            1..362
                     /gene="Spata31f1"
                     /gene_synonym="Fam205a"
                     /inference="alignment:Splign:2.1.0"
     CDS             219..4214
                     /gene="Spata31f1"
                     /gene_synonym="Fam205a"
                     /note="family with sequence similarity 205, member A"
                     /codon_start=1
                     /product="protein SPATA31F1"
                     /protein_id="NP_001386081.1"
                     /db_xref="GeneID:100361292"
                     /db_xref="RGD:2320471"
                     /translation="MLSSTGFLWDTECSSYVYFYIFIIVLVVWQVRQNYRGLKCEHKR
                     SCCRRHQKVRQRARDAASRARRLSREEAEKPWELLSIMKSQSWIPKEGSVRQLLCLDP
                     GCQICEAATLEIRQLLQSEKNQLSPALLRLPQGSVCLEMLPISSESFQWSEELYSGPS
                     TNFPVAPGNQTLTHLTEQFTQSTSADGVQICWTDHLQVGQDFHPTDMPMAPETVMSSR
                     LEESAVFANEEDMVDSNLNYIQQLQEHEALDSQFPFQTLNPQITHATHPMSVSIVTDV
                     PQPFLSPEVLRLLELHVKKLMHFQRWGLPRRVEESLKQLMPNPPMYFQPEHNQPVPFI
                     LNTNSQDYVHRFGGMSPQTWYSYMDRQPIQTFWVSEWSSLDQRLPCKPIPSPMEKPLP
                     IPDYELLVRDLCLLPKAQADDFQSNLQKKFTQLFFGLPSMHSESLGSTFLCTQGVSKD
                     TFKPSYKDPPFLKELPLFPLPKAALPPSSTSPNESLCEHQQRAQIGVPFLTLSECKTL
                     EWHLLQRQLQLQWGLPAVIPGSPYTQSHTQYKLCNKAKPCETLKASRPRKSFSVLTRE
                     LFFIPRHARRLLEFHLQKQLIHQRWGLPQRIQHSIHMLLSSPDQQSLSCMGGSLPDVS
                     ISQPENPEVDRSGGVFSSTAGKGSIPMPHLFAEAKAILKSHVHTKCEQIHKCKFPACV
                     QSSRDHRIPGNMAAGTLFPNIPQGQPLELQAENNPDLHQEVVPWKQMDLDQDTQAFSG
                     AFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCVAPTRAISPTVDQFVITN
                     MPRPVKSPQKPVRQKSPSEGPCLSGLVSGPQDDNETSANIEEELQPGVQMDGRTEKVP
                     PEREPLLNRPYSFNTEIMEKLNFHLKKKVLEIKLGLPLKANALQESSAADPESDSIQE
                     SLGSPCLSESTLFQEQPASGDLPPAPDPNEVHLELPATAVPAAFQEQERPSSRAVPHS
                     SAPQGPRPLYFYRNMIEAQVHYVQMGTGEETPNLGEPFSTESQSSRKSKSSGHVPTMT
                     GRNLGKPKAAGDLGEGDAGLLLSLVSQKPHQDGELEVEKKTLHRTPQGSSQQGHNFQP
                     EGVCPHSPRESPELEFPAPPPEIFMEIDSEQDTEDSQIEDSIVLEAARIAEVPHSEVS
                     QASQASQTSQASQAPQGLPSPCSPIQRKPFQAQPCPGHFSPGRMMPASPNTRPSHLPE
                     AGLKNKMKFFLHSINPKTKSRTYTEPPVVFTPGKVAKTSKENVERGLLRTKSPTKKTR
                     SEDFRGPKAQSLSSEKPVIAPYLTPSYILDSKFWPRSRQLGPVSVLGSSHYCPRHCPR
                     LAYATQQRNPP"
     exon            363..408
                     /gene="Spata31f1"
                     /gene_synonym="Fam205a"
                     /inference="alignment:Splign:2.1.0"
     exon            409..469
                     /gene="Spata31f1"
                     /gene_synonym="Fam205a"
                     /inference="alignment:Splign:2.1.0"
     exon            470..4384
                     /gene="Spata31f1"
                     /gene_synonym="Fam205a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgacattca gaccgaggtt tcatgacctt tcaagataac catgtaccct cttctataga
       61 ctggaatacc gcaccagctt cttttatgga atggaggcct ttgtgatgca gtcgggtggc
      121 ctgattctat cctctgtggt gtgctcacac caagccttgg tcctgggagc tattagagta
      181 gggatggctg gtctcctcat gcgagtgagg tttggacgat gttgagttct acgggctttt
      241 tgtgggatac tgaatgctct tcatacgtct acttctacat tttcatcatc gtcttggttg
      301 tttggcaagt gcgtcagaat taccgaggat tgaagtgcga acataaaaga agctgctgcc
      361 ggcgtcatca aaaagtcagg caaagggcta gagatgcagc gtcaagagcc aggagacttt
      421 cccgagaaga agctgagaag ccgtgggagc tgctctctat catgaaaagc caaagctgga
      481 tccccaagga gggaagtgtg cggcagctcc tgtgtttaga tcccggctgc caaatctgtg
      541 aggctgcaac tctagagatt cggcagttgc tgcagagtga gaaaaaccag ctctcccctg
      601 ctttgttgag actgccacag ggctctgttt gcctggagat gttgcccata tccagtgagt
      661 cttttcaatg gagtgaggaa ctttactctg ggccctccac aaattttcca gtggcacctg
      721 gaaaccaaac actaacacac ctaacagagc agttcacaca gtccaccagc gcagatggtg
      781 tccagatttg ctggactgat cacctccagg taggacagga ctttcatccg acagacatgc
      841 ccatggctcc tgagactgtg atgtcttcaa ggcttgagga gtcagcggtt tttgcaaatg
      901 aggaagacat ggtggacagc aatttaaact atatccagca gctccaagag catgaggcac
      961 tggactcaca gttccctttt cagaccctga acccacaaat cactcatgcc acacatccta
     1021 tgtctgtgtc gattgtcacc gatgtccctc agccattcct cagccccgaa gtgttaaggc
     1081 ttttggagct gcatgtgaaa aaactcatgc atttccaaag gtgggggctc cccagacgtg
     1141 tagaggagtc cctaaagcaa ctgatgccaa acccacccat gtatttccag ccagaacata
     1201 atcaaccggt tccatttatc ctgaatacta attctcaaga ctatgttcat aggtttgggg
     1261 gtatgtcccc ccagacttgg tactcatata tggaccgaca acctatccag accttttggg
     1321 tttcggagtg gtcttcacta gaccaaagac taccctgcaa accaatcccc agccctatgg
     1381 aaaagccctt acccattcct gactatgaac ttcttgtacg tgacctctgt ctactgccta
     1441 aggcacaagc tgatgatttc caaagcaatc ttcagaagaa attcactcag ttattcttcg
     1501 gcctcccttc tatgcacagt gagtccttgg ggtctacctt cttatgcact cagggtgtct
     1561 ccaaggacac cttcaaaccc tcctacaaag accctccttt cttgaaggag ctcccactct
     1621 ttcccttacc taaggcagct cttccccctt cttcaacttc tccaaatgag tctttgtgtg
     1681 agcaccagca aagagctcag attggtgtcc cgtttctgac tctgtcagaa tgtaaaacct
     1741 tggaatggca tcttctacaa agacaacttc agcttcagtg gggcctgcca gctgtcatcc
     1801 ctgggtcccc atatacgcag agccacacac agtataagct gtgtaataaa gccaagccgt
     1861 gcgagacttt aaaagcctcc cggccacgaa aatccttctc agtcctcacc agagagcttt
     1921 tcttcatccc acggcacgca cgcaggctgc tggaattcca cctgcagaag cagctgattc
     1981 accagcgctg ggggctgccc cagaggatcc agcactccat tcatatgctc ctctcctctc
     2041 ccgaccagca gtccctgtcc tgcatgggcg gtagtctacc cgatgtgagc atctcacagc
     2101 cagagaaccc agaagtcgat aggtctggtg gcgtgttctc atccacagcc ggcaaagggt
     2161 caatccctat gccacacttg tttgctgagg cgaaggcaat attgaaaagc catgttcata
     2221 ccaaatgtga acaaatccac aagtgtaagt ttcctgcctg tgtccaaagc tcccgggacc
     2281 acagaattcc tgggaacatg gcagcaggga ctttattccc aaacattcca caaggtcagc
     2341 ccctggagct ccaggcagaa aacaaccctg acctacatca agaagttgtt ccctggaaac
     2401 aaatggacct tgaccaggac acacaggcct tttcaggtgc tttcattgaa cactgtaggc
     2461 gaccccaagc cctgtctgag gaaaccatta agaaactgga gaccacttta aggcataagt
     2521 atttggcctt cctgtcaggc ctgcaggccc tttattgcgt ggccccaacg agagcaatat
     2581 ccccaactgt tgaccaattt gtaatcacaa acatgcccag gcctgtcaaa agcccacaga
     2641 aacccgtacg tcagaagtcc ccatctgaag gtccgtgttt gagtgggctt gtgtccggtc
     2701 ctcaagatga caacgagacc tctgcaaata ttgaggagga gctccagcct ggagtacaga
     2761 tggatggaag gacagagaag gtgcctccag agagagagcc tctcctgaat aggccctact
     2821 catttaacac agagatcatg gagaaactga atttccacct gaagaaaaag gtcctggaga
     2881 taaagttggg acttcctcta aaagcaaatg ctctccaaga gtcatctgca gcagacccag
     2941 agagtgactc catacaggag tctctcggga gtccgtgttt atcagaaagc acactgttcc
     3001 aggaacagcc cgcctcaggt gaccttcctc cagccccaga tccaaacgag gtccaccttg
     3061 aactgccagc tactgcagtg ccagctgcat ttcaggagca agagcgaccg agttcaagag
     3121 cagtgcccca tagttctgcc ccgcagggcc ccaggccctt atacttctac agaaatatga
     3181 ttgaggccca agtgcactat gttcagatgg gaaccggtga ggaaaccccc aatctagggg
     3241 aaccctttag caccgagtcc caaagctcac gcaagagtaa atcctccggc catgtcccca
     3301 caatgacagg cagaaacctg gggaaaccca aggcagcggg agaccttgga gaaggggatg
     3361 ctggtctttt gctttccctg gtcagtcaaa aaccacacca agatggagag ctggaagtgg
     3421 aaaagaagac cctgcacaga acacctcagg ggtcctcaca acagggccat aactttcagc
     3481 ctgagggtgt ctgtccacac agcccccggg aatcccctga gctcgagttc ccagctccac
     3541 ctccagaaat ctttatggag atagactctg agcaggacac agaagacagt caaattgagg
     3601 actccattgt cctggaagct gcaaggattg ctgaagtccc ccattctgag gtctcccagg
     3661 cctcccaggc ctcccagacc tcccaggcct cccaggcccc ccagggcctg ccttctccat
     3721 gctcaccaat tcagagaaag ccttttcagg cccaaccttg cccgggtcac ttttcgccag
     3781 ggcgtatgat gccagcctct cctaacacta ggcccagcca tcttccagag gctggcttga
     3841 aaaataagat gaaattcttt ttacactcta ttaaccccaa gacaaagagc agaacataca
     3901 cagaaccgcc cgtggtcttt acacctggaa aggtggccaa aaccagcaaa gaaaatgttg
     3961 aaaggggtct gcttcgaacc aagagcccca ccaagaaaac taggtcagag gacttcagag
     4021 ggcccaaggc ccagtctttg tcctctgaga agccagtgat agctccctat ctaactcctt
     4081 cctatattct agacagtaag ttctggcccc gctctcggca gcttggccct gtctcagtac
     4141 tgggcagctc ccactattgt cctcggcact gtccgaggtt ggcttatgcc actcaacaga
     4201 gaaacccacc ctagatccca gggttcacct cagaaatgtt gttctgctaa tggagaccac
     4261 tcagggtgat ggcagcctct aggctccccc tcttctgtat cctttaaaga gaacgattat
     4321 tgttattttc tctaatgaac aggtggatta aagagccacc cataatatat tccgtacctg
     4381 taaa
//
