LOCUS       NM_001408757            4341 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus SPATA31 subfamily E, member 1 (Spata31e1), mRNA.
ACCESSION   NM_001408757 XM_003750671
VERSION     NM_001408757.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Jun 23, 2022 this sequence version replaced XM_003750671.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.49600.1,
                                           SRR26360181.2680328.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-220               JAXUCZ010000009.1  38600176-38600395   c
            221-4341            JAXUCZ010000009.1  38594738-38598858   c
FEATURES             Location/Qualifiers
     source          1..4341
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q21"
     gene            1..4341
                     /gene="Spata31e1"
                     /note="SPATA31 subfamily E, member 1"
                     /db_xref="GeneID:100911971"
                     /db_xref="RGD:6489933"
     exon            1..220
                     /gene="Spata31e1"
                     /inference="alignment:Splign:2.1.0"
     CDS             35..4156
                     /gene="Spata31e1"
                     /codon_start=1
                     /product="SPATA31 subfamily E, member 1"
                     /protein_id="NP_001395686.1"
                     /db_xref="GeneID:100911971"
                     /db_xref="RGD:6489933"
                     /translation="METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPF
                     LKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPI
                     QHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVV
                     ATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTE
                     IQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSC
                     KVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQ
                     RTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPT
                     GMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTE
                     NLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETA
                     SSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQ
                     QSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQ
                     TNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGY
                     LHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPK
                     TSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGR
                     VKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRD
                     SLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMT
                     KVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRD
                     KMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDAD
                     QTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMS
                     PKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGIN
                     TQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRS
                     GMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSN
                     HPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQP
                     GIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR"
     exon            221..4341
                     /gene="Spata31e1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcagtagcct gagtggtgca ctgctattca gaagatggag actttcctcc ttctgatgaa
       61 tagcattagt gacttctgga tgagctccag ctccatgtcc acagtaatgg acatgatctt
      121 cgccattctg tgcggagtgg ggttcttttt cctactgatc ccattcctga aggagtatcc
      181 agggtcacca ccacccggga gcaaaaagaa catctcagag gtggtgaaga ggaggcagag
      241 caaggacagg aagaaatctg ttactgtaga cggttgcaga gatagtcaaa agaattctct
      301 ggatatccaa catgatttac agactatgga aagccccatc cagcatcttt tactggactc
      361 ttctccccac cccttttgga actctaagga gaaactaaat cagctttccc tccctcagct
      421 gttttcttac cttaaggtct tagaggctct catacagcag aaatttaacc aacttttatt
      481 gggtttatcc tctgtgctct ctgagtcagt tgtggctact gcctgggtct ccagagaacc
      541 ttcctcagga gaacgtaaaa ctgtgaggtt tagtgattca cttggctttg accaagctct
      601 acccctagct aaaggaccac cacagagatg cctggaccag ccattgcccc accaacttgt
      661 gacaccaagt ttggtaggta tgacagaaat tcaggaacaa gaaaacctcc caaactctat
      721 atcatatcaa acaccttcga tattccagag tagggcacgt ggaacagcat atcctaccac
      781 tgcgacaggg atacaggtac cccttccaac tacaaatgaa ccctgtcacc ctggattgaa
      841 ttggaaagat attccaagtt gtaaagtcca aaactgtcaa ggagccagta gccagcccac
      901 tgagagctta gccaggtgca cgctgcccac taaaaatacc aggtcagcct ccatccctcc
      961 tgagcattat ctaatggtcc accatcatga gcagccacag catgaagaga aggcaattaa
     1021 tttaggagaa caacaaagaa cccatgccag attcctccct tctaaggaac cagcacagct
     1081 ccagggagat tccccaccaa acagtaatgg ttatggcaag aactggcctg aactcaacca
     1141 acctgcccag ccctccaccc tcaactccaa aacttacaag tggaaccaga tgatggggcc
     1201 tgtgcccact gggatgttat taaagaaggt catagcaaag tatggcatac ctaacaccat
     1261 caagaaggac cttaaactta gggttaaaga cctgctttgt acttctagca gcacccccgg
     1321 ggagagtctg gaaaccaaga atcttacgct gaggacagat gagcactcta tgaacaccac
     1381 tgagaacctt tccttccttg acccaaagac tacaatgatg aaatcaaaca tcatgcagct
     1441 tcccatgaaa cacagacaat taccctgtga ttccaaggcc gaaccctata ccaaggctgc
     1501 ctttatcctg gaaaacttgc atcaccaaga tccaggggga ataagggtag aaactgcatc
     1561 atctgccagg ctgcgaagtc ctctgtttga acaatcacct ccagaggtac agaagaccca
     1621 aagttccccc ccacctattg acagccatgg tcactcaagg tcccatccag atcaatggca
     1681 gagataccag agtgttcagc cccatgctct ctgctcccag gcacaacccc agcagagcag
     1741 gagtatccaa ggaactggga gaagtatcct gcaaccaaat atcagcgtat ggatgtccaa
     1801 gcatgaacgc tggatgaggt ctgaggatgt ggcttcagga cataccagct ggagttcaag
     1861 aactgtgggc tatagagaca gagtttcacc atcagtggcc aaacaaacca acatattgaa
     1921 gataaaagaa gagtcacctc atgtgtggag agcaaatctg ggatctggtg agattaccaa
     1981 tgaacaagcc ttaaataaca gtaatgagga ctttgagccc atagaggcca aaagaagtca
     2041 aggccatctc caaatgccta cccaacaaaa cacagggtac ttgcatttaa aaacagaaga
     2101 gtatagtaac aatgacttga aagtaaacaa gcagccacag gcctggtctg tgagccatca
     2161 tgcagatggc tctaatacag tacaccatgc catggtcaaa ttgccttcac agcactcatt
     2221 gcccagcctc cagaatgggt ggcaagaccc caagacttcc cagggcttag gtgatctcct
     2281 catgaataga gatcagagtg tggagactca gttcagagtc cacaaggata aaactgaagc
     2341 aacgaatgac agtgtatttc atccctctga aaagaggccc agtaatttga aatatggagg
     2401 cataagccag ggagaaaggc ttggaagagt aaagtcttct atttcaagtt tcacccagct
     2461 caaggattca gccaagactg aaagtaagtc ctcccctaat ataggaggaa aaagagaggc
     2521 tccttctaaa agctccttga agttcatctg gaatggtgca caatatgaaa acctcagcac
     2581 aaaactcaag gggcagaggg attctttgaa gaaagacatt cccccaccag ttactgagca
     2641 gacacaggag gtagtacata gaataaacgt catttacagt acagcagttg aactacaatc
     2701 cctcatggac tctctagttc ataaactggt gaaaactgta ggtgagcctt cagagttgac
     2761 cagaaagcac atgacaaagg tacaagagta taaaatggaa tcattgccat tccagctggg
     2821 cagctcttcc caaccttcta agggactcca tgacccaaac aaaagccgat cagtaagaag
     2881 aatgagcgat gaccacacca gccccaagga gcccaacaac catactttca catatagagg
     2941 aaatagagac aaaatgcagg caggcgtgga tgtccagaga gtctgttacc aacatctgga
     3001 caaagtgaag ataggctttg gccagcactc cactcccatg aggaatggca atccatgttt
     3061 tcacaagaaa gctggagaca agcaggagtc aagtcttgct gatcagagca ctggtgacgc
     3121 agatcaaact aaaccaaaga atgaaattgt aggctctcca catagaatcc cagaaaggca
     3181 caaccagtca tccagataca gagaaattag agacaatcag gagcctagtg tggaccataa
     3241 agccattgac ccacatcaaa atactaagaa aggaatgggc tacagtcaac ttatgagtcc
     3301 taaagagaac cacccagtca agatcagtgg aactgctgcc cagggagcct ctgacccaga
     3361 agaaattaga acaaagagtg gaaaggagtg ctctccacat agaagcccca agatgcatga
     3421 ccactcactc agacacagag aagttagaga taaaccacag cccggtatta atacccagag
     3481 agcctatgat caacatctga acagtccaaa gaaaagaatg acctctgaaa acctcctcac
     3541 tcccaagggg accaaccatc cttgttggca cagggtaact ggagacaagc aacagtcaag
     3601 tctctctgac cagagagcct gtgacccaga acaaatgaga aggagtggaa tgagctccta
     3661 tccacaaaga agtcccaagg tgtatcacct ttcatgcagt tctgaaaaaa ttggagaaaa
     3721 attgctgcca ttggttaatg accagagaac tcatgacaaa cacccaaata gtgtgaagac
     3781 aagaggctgt gacaacctcc ccactcccaa ggggagcaac catccacagg gttacagagt
     3841 aattgaagac aagcagcagt taggtcttgc ttaccggaga acctgtgacc caggtcaaat
     3901 taaaaagagt ggaatgggca agggtccatg caaagacacc gaggaatgca accttttata
     3961 cagatataag ataattggaa ataaacagca gccaggcatt gtccatagag cctgtgaccg
     4021 acatcaaagt tcaaaagaag gaatgggcca gggtcaacct atgaacccca aagtgtgcca
     4081 ttcagccaag cacaggagaa ctggaggcca ggaccagtca ggtgttgctg cacaaggagc
     4141 ctctaaccca aggtagactt taccatcaga ggtcaaagag caggcacctc aggccatctt
     4201 tgcctccctg tactaggaac ccttccagaa gatgttccat ctgctccgcc attgttttcc
     4261 cctatggttt cttggtaata aatgttgacc tttttcctga aaaaaaaaag aatttacaat
     4321 aaacactgat aaaaatacag a
//
