LOCUS       NM_001408728            4228 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus spermatogenesis associated 31 subfamily D, member
            1B (Spata31d1b), mRNA.
ACCESSION   NM_001408728 XM_039096349
VERSION     NM_001408728.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Jun 22, 2022 this sequence version replaced XM_039096349.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.70536.1,
                                           SRR26360181.3228841.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760434 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-217               JAXUCZ010000017.1  4964308-4964524     c
            218-257             JAXUCZ010000017.1  4963212-4963251     c
            258-318             JAXUCZ010000017.1  4962591-4962651     c
            319-4228            JAXUCZ010000017.1  4958507-4962416     c
FEATURES             Location/Qualifiers
     source          1..4228
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..4228
                     /gene="Spata31d1b"
                     /gene_synonym="Fam75d1; Fam75d1b; RGD1561563"
                     /note="spermatogenesis associated 31 subfamily D, member
                     1B"
                     /db_xref="GeneID:502113"
                     /db_xref="RGD:1561563"
     exon            1..217
                     /gene="Spata31d1b"
                     /gene_synonym="Fam75d1; Fam75d1b; RGD1561563"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..4054
                     /gene="Spata31d1b"
                     /gene_synonym="Fam75d1; Fam75d1b; RGD1561563"
                     /note="family with sequence similarity 75, member D1;
                     family with sequence similarity 75, member D1B; putative
                     spermatogenesis-associated protein 31D4"
                     /codon_start=1
                     /product="spermatogenesis associated 31 subfamily D,
                     member 1B"
                     /protein_id="NP_001395657.1"
                     /db_xref="GeneID:502113"
                     /db_xref="RGD:1561563"
                     /translation="MENIFSSLNGLTETWLTFGSASYHIDLSSTLLSGLGLLLLYISS
                     LIVRLLARSLQRKKYAPKPQEEGKERRQDLTDGGTCQGEVEQRRKLQTIQRSPPREPS
                     DASCDELLPHGGPLFPVCDRSGDVGHQLSQAILKDGAASHFYVTSTAPVTEASFILSS
                     LLTGRQPGHPAPAGPQEPLPLAQSILSPNCFAPLEGFHSTALLHDSLTPESALPLNPK
                     PLPDPTPPYPFPSFPLPKKEVQKSEAVFRPETARSLVDGPNEVSVNVPLVKGTGYVRQ
                     AMPAASPRQPAADNQLSSGLDNQRPPPTHVSQASLQKETRAYHLEPGQLFSPNSDALK
                     LLKRLDQKGRDFLMAKEEENKDCFTKSPSSSEKLPLGKSLVEPQDLAASHSARSKVTH
                     QQLPHSRTSEDHEELKPAQLFWGPPSLHSEALRPTTSLYDRSSTFVCFNSIAEASIAD
                     YSHAILLPTPLSVYGSQTWLQPEPQSHPTCDPLAESQPQPQLQYPVSVLTLAPSQSEL
                     RYCGVHFHRPQGDEQALGPSATQCLEYNILKKEQERVWGLPLVIKKSQNAFCPSPPKF
                     LSASRSSKACTPRPILPGDFPLTGELQKKLEHHLRKRLIQRRWGLPHRIDESLSLMCP
                     QPEQTDISESRRSRGLSKTPFSKSHGNKDSKAIGPGGAGGFLSRMPEGHSLQQEILVK
                     EQTYSQDTGQNDRPQGNLQEAPQKTQPESQEGRQPGKLSSPSQVHQKGIENILEEHLI
                     RKMREISGGEIPSAVDRSRHSMTVALPAPETSSRHVAPLAGEEDGLTEHPHSLTLSPS
                     KEKVLEEHITTFGRRMAFGLPQRVEESLESYLTRAAPSRPFHQLHTRAHSVCTVDSDK
                     PSRFLRRNTNGDRKGTVDLVPVQHRPLPAAWLAGHTQPASENKKVCVDKDLSMAPSGR
                     EPIKHWTPSMAHKGIRQHSRSDSRPDPEPPMSPDGPTEERLASSNNTQGSQGERKNWK
                     DCSMAEGSTDLHKGEQLPGPDPQSTKNLKGTQGLCSPGSHATECQSLQGMSVPQDSET
                     PHSKSQVSTEVVPNSEGETHIQVPDLPATAFASEEMTSKPRGPSSGDMAVSQVLHVHF
                     PSVGINMEPRQGPWVPAYVSGKSKNKDCPPAARGVPPLVTEAGKLGGGDAGLGTSQTR
                     GKRHCAQARAAEETQGHTSSPALTPKSQPLENQFPNQVKGFWQRLSPGRKHKGQEKIL
                     ARGCSSLMPVKGASLIKGRCEFCGNTAAQKCVREPGMVLRKQLGFRHWTVIPCPQAPV
                     SPLMGSVEAQQELQLQAQAEPAQRLPHFCCRASCSQVQRAESCSPGQGQTALERCGTT
                     GKAKMVEPSPMHASPPKSYL"
     exon            218..257
                     /gene="Spata31d1b"
                     /gene_synonym="Fam75d1; Fam75d1b; RGD1561563"
                     /inference="alignment:Splign:2.1.0"
     exon            258..318
                     /gene="Spata31d1b"
                     /gene_synonym="Fam75d1; Fam75d1b; RGD1561563"
                     /inference="alignment:Splign:2.1.0"
     exon            319..4228
                     /gene="Spata31d1b"
                     /gene_synonym="Fam75d1; Fam75d1b; RGD1561563"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agacacctca ggcagccatg ctgtttatac tatggagaac attttctcat ctctgaatgg
       61 cctcacagag acatggctga cctttggctc agcttcctac cacatagacc ttagctccac
      121 tcttctgagt ggactggggc tcctgcttct gtacatcagc tccctgatag tgagactgct
      181 tgcccggtct ctgcagagaa agaaatacgc cccaaagcca caggaggaag ggaaggagag
      241 aaggcaagac cttacagatg ggggaacttg ccagggagaa gtggagcaga gaagaaagct
      301 acagacaatc cagcgaagcc ctccgaggga gccctccgat gccagctgcg atgaactgct
      361 gccacatgga ggtcccctct tccctgtatg tgacagatct ggtgatgttg gtcaccagct
      421 ctcccaggcc atcctcaaag atggcgctgc ctctcacttc tacgtgactt ccacagctcc
      481 tgtgacagag gcctcgttta ttctgtcctc tctgctcaca ggaaggcagc caggacatcc
      541 agctccagcc ggtcctcagg agcctttgcc gctggctcag tctatcctct cacctaactg
      601 ctttgccccc ttagagggct tccactcaac cgcactgctg catgactctc tgacaccaga
      661 gtctgcactt cccttgaacc ctaagcctct accggacccc accccaccct acccattccc
      721 ttcttttcct cttccgaaga aagaagtgca gaagtcggaa gcagtcttcc ggccggaaac
      781 cgctagatct ctggtggacg gacccaatga ggtgtctgtg aatgtcccac tagtcaaagg
      841 cactggctat gtaagacagg caatgccagc tgcctcccca cggcagcctg ctgctgacaa
      901 ccagttatct tcaggcttgg ataaccagcg tcccccacct acccatgttt ctcaagcctc
      961 tttgcagaaa gaaacaaggg cctaccatct agagcccgga cagctctttt cccccaactc
     1021 tgatgccctg aaactgctca aaaggctaga ccagaagggg cgtgatttcc tgatggcaaa
     1081 ggaagaggag aacaaagatt gttttacaaa gtcacccagt tcttcggaga agctgccgct
     1141 gggaaagtca ttggttgagc cacaagattt ggcggcttct cactcagcaa gaagcaaggt
     1201 cacgcaccag cagctccctc actccaggac ttctgaagac cacgaggaac tcaaacctgc
     1261 ccagctcttc tggggccccc cttcactaca cagtgaggcc ctgcgcccta ctacttcctt
     1321 gtatgaccgt tcctcaacat ttgtctgctt caacagcatc gccgaggcct ccattgctga
     1381 ctactcccat gcgattctgc ttcccacgcc cctctctgtg tatggatcac agacctggct
     1441 acagcccgag ccccagtctc atcctacatg tgaccctctt gctgagtcgc agcctcagcc
     1501 tcaactccaa taccccgtct cagtcttgac gcttgctcct tctcaatccg agctgagata
     1561 ctgtggggtg cattttcaca gaccccaggg agacgagcag gctctcggac cttctgccac
     1621 acagtgcctg gaatacaaca tcttgaaaaa agagcaagag agggtgtggg gtttaccctt
     1681 ggtgatcaaa aaatcccaga atgccttttg cccctcccct cccaagttct tgtctgcaag
     1741 tcgctcctcc aaggcctgta ctcctcggcc catccttcct ggagacttcc ccctcaccgg
     1801 ggagctccag aagaaactgg aacaccatct ccgaaagaga ctcattcaac gccgctgggg
     1861 cctgccccac aggatcgatg agtccctgtc actcatgtgt cctcagccag aacagactga
     1921 catctctgag tccaggagga gccgtggact ctcgaagact cctttctcta agagccatgg
     1981 caacaaggac tcgaaggcca ttggacctgg aggagcagga ggctttctct ctcggatgcc
     2041 tgaaggtcat tctctgcagc aggagatttt ggtcaaagaa cagacataca gtcaagatac
     2101 tggccaaaac gaccgtcccc agggcaacct tcaggaggcg ccacagaaga cgcagccgga
     2161 gagtcaggaa ggcaggcagc ccggcaaact ttcaagccct tcacaggtgc accagaaagg
     2221 aattgaaaac atcctggaag aacacctgat caggaaaatg agggaaatca gtgggggcga
     2281 gatccctagc gccgtggaca ggtcgaggca ttctatgact gtggcactgc ctgcacctga
     2341 gacctcctcc agacacgtgg cacctttggc aggtgaggaa gacggactga cagagcaccc
     2401 ccacagcttg acgctcagtc ctagcaaaga aaaggtgctg gaagaacaca tcacaacctt
     2461 cggcaggagg atggcgttcg gccttcctca aagagttgag gaatccctag agtcctactt
     2521 gacaagagca gcgccatctc gacctttcca tcagctccac actcgagccc acagcgtttg
     2581 tacagtggat tctgacaagc cctccaggtt cctcagaaga aacactaatg gagatagaaa
     2641 ggggacagtg gatttagtcc ccgtccaaca caggcctctc cctgctgcct ggcttgcggg
     2701 ccacacacag ccagcctctg agaacaagaa ggtgtgtgta gacaaagacc ttagcatggc
     2761 cccaagtggc cgagagccga tcaagcactg gacacccagt atggcacaca aaggcatccg
     2821 gcaacattct agatcagaca gcaggcctga cccagagcca cccatgagcc cagatgggcc
     2881 aacagaggag agattggctt ccagcaacaa cacacagggc tctcagggag aaaggaagaa
     2941 ctggaaagac tgctccatgg ctgaggggtc cacagaccta cacaagggag agcaactccc
     3001 tggtcctgac ccacagtcca ctaagaactt gaaaggcacc cagggcctgt gctccccagg
     3061 gagccatgcg actgaatgtc agtccctgca gggaatgtcc gttccccagg actctgagac
     3121 gcctcactct aaaagtcagg tgtccacaga agtcgtgcca aactcagagg gcgagacaca
     3181 catccaggtg ccagacctgc ccgccacagc ctttgcctca gaagaaatga cttccaaacc
     3241 ccggggcccc tccagtgggg acatggcggt ttctcaggtg ctgcatgtgc acttcccctc
     3301 tgtgggcatc aacatggagc cacggcaggg tccctgggtc cctgcatatg tctcaggcaa
     3361 gagcaagaac aaggactgtc ccccagctgc cagaggagtg cccccactgg taactgaggc
     3421 aggaaagctt ggtggagggg atgcaggctt agggacatcc cagaccagag ggaagagaca
     3481 ctgtgctcag gccagggcag cagaggaaac ccaaggacac acatcctccc cagcactgac
     3541 acctaagagt cagcctctgg aaaatcagtt ccccaaccag gtgaagggct tctggcagag
     3601 gctgtcccct gggaggaaac acaaagggca ggaaaagatc ctggccaggg gctgctcctc
     3661 attaatgcca gtgaagggcg caagcctcat caaagggaga tgtgagttct gtgggaacac
     3721 agcagctcag aaatgtgtga gagagcctgg gatggtcctc aggaaacagc tagggttcag
     3781 gcattggaca gtcattcctt gtccccaggc acctgtgtct cccctcatgg ggtctgtaga
     3841 agctcagcag gagttgcaac tgcaggctca ggcagagcct gcccagaggc tgccccactt
     3901 ctgctgcaga gcttcctgct ctcaagtgca gagggctgag tcctgcagcc caggacaagg
     3961 gcagacagcc cttgagaggt gcggcactac tggaaaagct aagatggtgg agccctcccc
     4021 catgcatgct tctccaccaa agtcctatct gtaggtgtca agctggctag gaggctccgg
     4081 ctgcccttct ctgtgttgaa ggcactgctg gggggtttgt tcccattaac catatgaaat
     4141 gcttatccag attttctagg gaatatgttt tctacccaat ggtaattttt cccttgctga
     4201 cagtattgat tcactgatac attttctg
//
