LOCUS       NM_001008359            3298 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus spermatogenesis associated 31 (Spata31), mRNA.
ACCESSION   NM_001008359 XM_225090
VERSION     NM_001008359.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3298)
  AUTHORS   Zuo,Y., Gao,J., Yeung,W.S. and Lee,K.F.
  TITLE     The testis-specific VAD1.3/AEP1 interacts with beta-actin and
            syntaxin 1 and directs peri-nuclear/Golgi expression with bipartite
            nucleus localization (BNL) sequence
  JOURNAL   Biochem Biophys Res Commun 401 (2), 275-280 (2010)
   PUBMED   20850414
  REMARK    GeneRIF: VAD1.3 interacts with beta-actin and syntaxin 1 in vitro.
REFERENCE   2  (bases 1 to 3298)
  AUTHORS   Luk,J.M., Lee,N.P., Shum,C.K., Lam,B.Y., Siu,A.F., Che,C.M.,
            Tam,P.C., Cheung,A.N., Yang,Z.M., Lin,Y.N., Matzuk,M.M., Lee,K.F.
            and Yeung,W.S.
  TITLE     Acrosome-specific gene AEP1: identification, characterization and
            roles in spermatogenesis
  JOURNAL   J Cell Physiol 209 (3), 755-766 (2006)
   PUBMED   16924657
  REMARK    GeneRIF: VAD1.3 protein/AEP1 is expressed during spermatogenesis
            and interacts with beta-actin.
REFERENCE   3  (bases 1 to 3298)
  AUTHORS   Luk,J.M., Mok,B.W., Shum,C.K., Yeung,W.S., Tam,P.C., Tse,J.Y.,
            Chow,J.F., Woo,J., Kam,K. and Lee,K.F.
  TITLE     Identification of novel genes expressed during spermatogenesis in
            stage-synchronized rat testes by differential display
  JOURNAL   Biochem Biophys Res Commun 307 (4), 782-790 (2003)
   PUBMED   12878178
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CK653072.1 and BC085936.1.
            
            On Feb 26, 2008 this sequence version replaced NM_001008359.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085936.1, AF511042.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-17                CK653072.1         1-17
            18-3298             BC085936.1         1-3281
FEATURES             Location/Qualifiers
     source          1..3298
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..3298
                     /gene="Spata31"
                     /gene_synonym="Aep1; Fam75a4; Spata31a5"
                     /note="spermatogenesis associated 31"
                     /db_xref="GeneID:353306"
                     /db_xref="RGD:727950"
     exon            1..213
                     /gene="Spata31"
                     /gene_synonym="Aep1; Fam75a4; Spata31a5"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..3177
                     /gene="Spata31"
                     /gene_synonym="Aep1; Fam75a4; Spata31a5"
                     /note="acrosome-specific protein VAD1.3; family with
                     sequence similarity 75, member A4; acrosome-expressed
                     protein 1; spermatogenesis associated 31 subfamily A,
                     member 5; SPATA31 subfamily A member 5"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 31"
                     /protein_id="NP_001008360.2"
                     /db_xref="GeneID:353306"
                     /db_xref="RGD:727950"
                     /translation="MENLPSLLESIYTTWLSLSSTIWAMDMILAFVCGLGLYLLLLPF
                     LESHLSSSPSDINFTRKPQIQMTWQSQYMKKFRNHCRNDAKAWEECLKKLKEKEKDEL
                     FLEEMSPGHHLNSLGNMFNSASAKQDSTTLSPFWNLKEKSEEQMATQKLSYPKISGDH
                     LQEKYDQLYWGLPSLHSESLVAAAWIPQTTSTLPSPFFLFNVISSVYPIHLQDKMSPV
                     LPHTHPLSYLDLQPPPLILSPLEFQSPALNQVHFQSPLPVLLPSSLPYSRDSGACYSQ
                     SQSKPHCPTTEIQYRERPLVTKQLESRLTLPLMVQKDAYSILASNPSHDWAVPIFPDN
                     FPISCELRDKLEQHIQKWFIQHQWYFPPEIQESEEVMGLQNSVTGNYQIRDQPCTSQA
                     HMSTGEHNKQGQKVKFQLENESCKNLGPILGKGPKDPVKGLEKNVVKVQGANILEPER
                     NLVKHFKSDSRNDSSNYIDEDLENNWKANFGTKSGQINQGLTPLSMRQSWLAMNDSFC
                     DTDIHMETRNLTAIKSSEKFMCSREKLAFLNPETRQTLEEHVVRFWVKHRWGLPLKML
                     KPINLFKLKSTESLPLTLCTQPSSTNSVHRTNSAVEVVRFLGKPCLRQIIIKDSSPPP
                     GNLLLVSSPSCKRAAIRRPPSGVDHEPSVALPNKPQSAYLAETLAYNFMETPTQSGGV
                     LKDEMETEEVLLLPRMTCAPNLRAHNPQAKVVSEYPYNVETELTGQPQIYTTSVLLPK
                     HSRSMPLPVDTLTSNALGDIVMVDGGNGLVQQRPSTPKHQVSQKGQIKMLVPTYQGED
                     TKRQSERKYEDMSKFSPVTERKNNFENQYYQTLPKTTQVLPESLFQRLLSRFLPRVHP
                     KKTIKGQECHPQKDNPTAATAQNQRRQVRKQPYMDDNVTEAQKLMTTVGQMLEKKMMQ
                     HQHHASKVNQPRVVPPGPTSWFSHGHMPVSCLKRRRPPSYPANSLCQRRYIQGRHNRG
                     QLPQKSVQFSQKPQILRNPRHMYPKSALNVVNSSQNRTTVPRTPNQHLCCPRHCAFQR
                     NVCRELGHPSVAFPNRKT"
     exon            214..286
                     /gene="Spata31"
                     /gene_synonym="Aep1; Fam75a4; Spata31a5"
                     /inference="alignment:Splign:2.1.0"
     exon            287..3276
                     /gene="Spata31"
                     /gene_synonym="Aep1; Fam75a4; Spata31a5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccaggaagaa ctcccaacaa tgggattcag atggagaatc ttccctctct tctggaaagc
       61 atttacacca catggctgag cctcagctcc actatatggg caatggacat gatccttgcc
      121 tttgtgtgtg gactggggct ctacctcctg ttacttcctt ttcttgagag tcatctgtct
      181 tcatctccat cagacataaa tttcaccagg aagcctcaga tacagatgac ctggcagagc
      241 cagtacatga aaaagtttag gaatcattgt aggaacgatg caaaagcttg ggaagaatgc
      301 ctgaaaaagc tgaaagaaaa agaaaaggat gaattatttc tagaagaaat gagcccagga
      361 caccatttga actctttagg gaatatgttt aactcagcaa gtgctaaaca agacagcact
      421 accttgtcac ccttctggaa cctgaaagaa aaatcagaag agcagatggc cactcagaaa
      481 ctatcatatc ccaagatctc aggggaccat ttacaagaga aatatgacca gctttactgg
      541 ggtctccctt ctctccacag tgaatctcta gtagctgctg cctggatccc tcagacaacg
      601 tcaactctcc cttctccctt tttcttattc aatgtcatct caagtgttta tccaattcac
      661 ctgcaggata aaatgtctcc agtgcttccc cacacacatc ctctgtccta tctggacctc
      721 caacctccac ccttaattct gtctccactt gaatttcagt ccccagcttt gaatcaagtc
      781 cattttcaat cccctctccc agtcctacta ccctcttctc taccctatag tagggattct
      841 ggagcatgtt attctcaatc acaaagtaag ccacactgcc ccacaactga aatacaatac
      901 agagaaaggc ccttagttac aaaacaacta gaaagtagat tgactttacc cttgatggtc
      961 cagaaagatg cttatagcat cttggcctcc aacccttccc atgactgggc agtccctatc
     1021 tttcctgata atttccccat aagctgtgag ctccgggata aactggagca acacattcaa
     1081 aagtggttca ttcaacacca atggtatttt ccccctgaga tccaagagtc tgaggaagtg
     1141 atggggcttc agaattcagt aacaggaaat tatcaaatca gagaccaacc ttgcacctca
     1201 caagcccata tgtctactgg tgaacacaac aagcagggcc agaaggtgaa atttcagcta
     1261 gaaaatgaat cttgcaaaaa tcttggacct attctaggaa aaggcccaaa agatccagta
     1321 aagggcttgg aaaaaaatgt agtaaaggtt cagggggcaa acattttgga gccagaaaga
     1381 aatttagtta agcacttcaa gagtgattcc agaaatgact catcaaatta catagacgaa
     1441 gatctagaaa acaactggaa agctaatttt ggtacaaagt cagggcagat aaatcaaggt
     1501 ctgacccctc tgagtatgcg acaatcctgg cttgctatga acgatagctt ttgtgacact
     1561 gacatccata tggaaaccag aaatttaaca gccataaaga gttcagaaaa gttcatgtgc
     1621 tctcgagaga agcttgcctt tctcaaccca gaaactcgac agaccctgga ggaacatgtt
     1681 gtaaggtttt gggtgaagca cagatggggt ctacccctta aaatgctcaa gcccataaac
     1741 cttttcaagt taaaaagtac tgagtccttg cctcttacac tctgtaccca accttcctca
     1801 accaattctg tacataggac caattcagca gttgaggtag tcagattcct aggaaaacca
     1861 tgcttgagac agataataat taaggattct tcaccaccac cggggaatct tctccttgtc
     1921 tcatctcctt cctgtaagag ggcggcaatt agacggcctc cctctggtgt tgaccatgag
     1981 ccttctgtag ccctaccaaa caaaccacag agtgcgtatc ttgcagaaac tctcgcttat
     2041 aattttatgg aaacgcccac tcagagtggg ggtgtcttaa aggacgagat ggagaccgaa
     2101 gaagtccttt tactgcctag aatgacttgt gccccaaatc taagggcaca caaccctcag
     2161 gcaaaagttg ttagtgagta tccatataat gtggagacag aattaacagg ccagccacaa
     2221 atttatacca cttctgtgct ccttccaaag cattccagga gcatgcctct tcctgtagac
     2281 actttgactt caaatgcatt aggtgacatt gtgatggtag acgggggcaa tggcctggtg
     2341 cagcagagac ccagtactcc aaagcatcaa gtctcacaga agggccaaat caagatgttg
     2401 gtccctactt atcaaggaga ggacactaag agacagagtg aaagaaagta tgaagacatg
     2461 tccaagttca gcccagtcac ggagagaaaa aacaactttg aaaaccaata ctatcagacc
     2521 cttccaaaaa ccacacaggt tcttccagaa agcctcttcc aaagactttt aagccgattt
     2581 ctaccgcggg ttcaccccaa gaaaacaatc aaagggcagg aatgtcatcc ccaaaaagat
     2641 aatcctacag cagccactgc ccagaaccaa cgaaggcaag tgagaaagca accatatatg
     2701 gatgacaatg ttactgaggc ccagaaactt atgacaactg ttggacagat gttagaaaag
     2761 aaaatgatgc aacatcaaca ccatgcttca aaggtcaacc agcctagggt agttcctcca
     2821 ggccctactt cttggttttc ccatggccac atgccagtct cctgcttaaa gcgaagaaga
     2881 ccacccagtt acccagccaa ttccttatgt cagaggcgtt atatacaggg caggcacaac
     2941 agaggccaac tgcctcagaa aagtgtacaa tttagccaga aaccacagat cctacggaac
     3001 ccccgtcaca tgtaccccaa gtcagctttg aacgtagtga attcttccca gaatagaaca
     3061 acagtgccaa gaaccccaaa tcaacatctt tgttgtccta ggcactgtgc cttccagaga
     3121 aatgtctgta gagaactagg acatccctcc gtagcttttc ctaataggaa aacataattg
     3181 aaagaaaaag attagtgaat gtaaaaatta tttttctcat gttagtacat tcaagatact
     3241 taatgtagcc caaaatacat gttttccccc ataaaaaaaa aaaaaaaaaa aaaaaaaa
//
