LOCUS       NM_199402               2598 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus spermatogenesis associated 20 (Spata20), mRNA.
ACCESSION   NM_199402 XM_340882
VERSION     NM_199402.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Shi,H.J., Wu,A.Z., Santos,M., Feng,Z.M., Huang,L., Chen,Y.M.,
            Zhu,K. and Chen,C.L.
  TITLE     Cloning and characterization of rat spermatid protein SSP411: a
            thioredoxin-like protein
  JOURNAL   J Androl 25 (4), 479-493 (2004)
   PUBMED   15223837
  REMARK    GeneRIF: SSP411 may play a role in sperm maturation, fertilization,
            and/or embryo development, as has been shown in thioredoxin family
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY438568.1.
            
            On Jan 12, 2004 this sequence version replaced XM_340882.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY438568.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..2598
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /note="spermatogenesis associated 20"
                     /db_xref="GeneID:360604"
                     /db_xref="RGD:735087"
     exon            1..139
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..2432
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /note="sperm-specific protein 411; sperm protein SSP411"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 20"
                     /protein_id="NP_955434.1"
                     /db_xref="GeneID:360604"
                     /db_xref="RGD:735087"
                     /translation="MSHHSPPPPKHKGEHKGHGLPRGSERGSSSRGKDRSASVSNSVP
                     MPAGGKASRTNCPPPAPQKTANRLINEKSPYLLQHAHNPVDWYPWGQEAFDKAKKENK
                     PIFLSVGYSTCHWCHMMEEESFQNEEIGHLLNENFVSVMVDREERPDVDKVYMTFVQA
                     TSSGGGWPMNVWLTPSLQPFVGGTYFPPEDGLTRVGFRTVLMRICDQWKQNKNTLLEN
                     SQRVTTALLARSEISVGDRQLPPSAATMNSRCFQQLDEGYDEEYGGFAEAPKFPTPVI
                     LNFLFSYWLSHRVTQDGSRAQQMALHTLKMMANGGIRDHVGQGFHRYSTDRQWHIPHF
                     EKMLYDQAQLSVVYCQAFQISGDEFFSDVAKGILQYVTRNLSHRSGGFYSAEDADSPP
                     ERGVKPQEGALYLWTVKEVQQLLPEPVGGASEPLTSGQLLMKHYGLSEAGNINPTQDV
                     NGEMHGQNVLTVRDSLELTGARYGLEVEAVRALLNTGLEKLFQARKHRPKAHLDNKML
                     AAWNGLMVSGFAVAGSVLGMEKLVTQATNGAKFLKRHMFDVSSGRLKRTCYAGAGGTV
                     EQSNPPCWGFLEDYAFVVRGLLDLYEASQESSWLEWALRLQDIQDKLFWDSHGGGYFC
                     SEAELGTDLPLRLKDDQDGAEPSANSVSAHNLLRLHGLTGHKDWMDKCVCLLTAFSER
                     MRRVPVALPEMVRALSAQQQTLKQIVICGDPQAKDTKALLQCVHSIYIPNKVLILADG
                     DPSSFLSRQLPFLSNLRRVEDRATVYIFENQACSMPITDPCELRKLLHQ"
     exon            140..319
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            320..384
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            385..539
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            540..683
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            684..885
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            886..1016
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            1017..1121
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            1122..1196
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            1197..1406
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            1407..1599
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            1600..1768
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            1769..1980
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            1981..2180
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            2181..2261
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
     exon            2262..2580
                     /gene="Spata20"
                     /gene_synonym="Ssp411"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatacccttc ctaccgccaa gtccgagaag ctgggggaga ctaacctggc agggagcccc
       61 caatgagcca ccattcccca ccacccccaa aacataaggg ggagcacaaa ggccacggtc
      121 tcccccgtgg ttcagaaagg ggcagctcct cccggggcaa ggaccgaagt gcttcagtta
      181 gtaattctgt gcccatgcct gctggaggaa aggcaagtcg gactaactgt cctccacctg
      241 cacctcagaa gactgccaat cgactgatca atgagaagtc tccatacctc ttacaacatg
      301 cccacaaccc ggtggattgg tacccctggg gacaggaagc cttcgacaag gccaaaaaag
      361 aaaacaaacc aatttttctc tcagtggggt actccacctg tcactggtgc cacatgatgg
      421 aggaagaatc cttccagaat gaagagatag ggcacctgct caacgagaac ttcgtctccg
      481 tgatggtgga cagagaggag aggccagacg tggacaaagt gtacatgact tttgtgcagg
      541 ccaccagtag tggaggaggc tggccaatga atgtgtggct gacccccagc ctccagccat
      601 ttgttggggg cacctacttc ccaccagagg atggtttgac tcgagttggc ttccgaacag
      661 tgttgatgag aatctgtgat cagtggaaac agaacaagaa cacccttctg gaaaacagcc
      721 agcgtgtcac cacagccctg ctggcccgat ctgagatcag cgtgggtgac agacagcttc
      781 cgccctccgc tgccaccatg aatagccgct gcttccagca gttggatgag ggatatgatg
      841 aggagtatgg tggctttgct gaggccccta agtttcccac acctgtgatt ctgaacttcc
      901 tgttctccta ttggctcagt catcgggtca cccaggatgg ctcccgagct cagcagatgg
      961 ctttgcacac cctgaagatg atggccaacg gaggcatccg ggatcatgtg gggcagggct
     1021 ttcaccgcta ctccacggac cgacagtggc acattcctca ctttgagaag atgctgtatg
     1081 accaggcaca gctctcggtg gtctactgcc aagccttcca gatctctggc gatgaattct
     1141 tctccgatgt tgccaaaggc atcctgcagt atgtgacccg gaatctgagc catcggtccg
     1201 gaggcttcta cagtgcagag gatgctgatt ctcccccaga gcggggcgtg aagccccaag
     1261 agggtgcttt gtatttgtgg acagtcaaag aggttcaaca gctgctccca gagccggtgg
     1321 ggggcgccag cgagcctctg acctcaggcc agctcctaat gaagcattac ggactcagtg
     1381 aggcaggcaa tatcaacccc actcaggatg tcaacgggga gatgcacggg cagaatgttc
     1441 tgaccgtgcg ggactcacta gagctgacgg gcgcccgcta tggcctggag gtggaagctg
     1501 tgagggcgtt gctcaacaca gggctggaga agctcttcca ggcccggaaa catagaccga
     1561 aagcacacct ggacaacaag atgctggctg cctggaacgg cttgatggtg tctggttttg
     1621 ccgtggcggg gtctgtccta ggtatggaaa agttagtcac ccaggccacc aacggtgcca
     1681 aattcctcaa gcggcacatg tttgatgtgt ccagcggccg cctgaagagg acatgctatg
     1741 ctggcgctgg aggaaccgtg gagcaaagca atccgccatg ctggggtttt ctggaggact
     1801 atgcctttgt ggtgcggggc ctgctggacc tgtatgaggc ctcacaggag agctcttggc
     1861 ttgagtgggc tctgcgtctg caggacatac aggacaaact cttctgggac tcccacggtg
     1921 gtggctactt ctgcagtgag gctgagctgg ggacagacct gcctcttcgt ttgaaggatg
     1981 accaggatgg cgcagaaccc agtgccaact ccgtgtcggc ccacaacctc ctccggttac
     2041 acggcttaac cggccacaag gattggatgg acaagtgtgt gtgcctgttg acagccttct
     2101 cggagcgcat gcgccgagtc ccggtggcct tgcctgagat ggtccgtgcc ctctcagctc
     2161 aacagcagac tctgaagcag atcgtgatct gtggagaccc tcaggccaag gacaccaagg
     2221 ccctgctgca atgtgtccac tccatctaca ttcctaataa ggtgctcatt ctggctgatg
     2281 gagacccatc aagcttcctg tcccgtcagc ttcccttcct gagcaacctt cgacgagtag
     2341 aagaccgggc cacggtctac atatttgaga accaagcctg ctccatgcct atcacggatc
     2401 cctgtgaact acgaaagctg ctacaccaat gactgcccag aactctccaa gctgggccag
     2461 aggctatgcc aaatctatag ccacccctgg gaaccctgcc tccagatgat cacagccatc
     2521 gttgtggctc ccccatggac accttactca ccatgaaata aacctaacag tgtcccgtgg
     2581 aaaaaaaaaa aaaaaaaa
//
