LOCUS       NM_001014177            1897 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus spermatogenesis associated 1 (Spata1), mRNA.
ACCESSION   NM_001014177 XM_342358
VERSION     NM_001014177.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1897)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079224.1.
            
            On Apr 1, 2005 this sequence version replaced XM_342358.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079224.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132263,
                                           SAMD00132265 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q44"
     gene            1..1897
                     /gene="Spata1"
                     /note="spermatogenesis associated 1"
                     /db_xref="GeneID:362056"
                     /db_xref="RGD:1359500"
     exon            1..68
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            69..238
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     CDS             203..1537
                     /gene="Spata1"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 1"
                     /protein_id="NP_001014199.1"
                     /db_xref="GeneID:362056"
                     /db_xref="RGD:1359500"
                     /translation="MSLNPSRPSSSELVELHVFYVPEGSWNYKLNTISIEVINNFISA
                     GFIRVSPQLTLQALRERLGEFLGVDAVAEKFLFLKCIGNNLAVVKEKQESELKLKSFA
                     PPYALQPELYLLPVIDHLGNVYSASTVNLDEQQSVDDTMEIDGTIHRPDSLSLSKDEP
                     GDPSLLENTWRDFPNHEEAEESQPTQQHFGNPRLPGSLEESDDCLGNVKSPFLWKNND
                     EDEGEEDDKATINRRQAKLVCDKEHSALPDLIDFPSFPSQRVSSRLVDTSLLKIEREK
                     IIEQMKQVKEERKYLENIREELIKKVEKLFEQSKSKRYHACDSWKKKYFDTKKVTASL
                     EEVLTKLREDLELYYKKLLMQLEAREIKMRPRNLANISDSKNYLIIQITEVQHAIDQL
                     KRKLDTDKMKLILEVKMRKQAASDLQTLRADLTQKKMGTPFRSPIFSGSVPT"
     exon            239..345
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            346..463
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            464..517
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            518..737
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            738..831
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            832..913
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            914..1022
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            1023..1148
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            1149..1327
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            1328..1426
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            1427..1514
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            1515..1584
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
     exon            1585..1872
                     /gene="Spata1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgaccggggc ggtgcggccc gacgcccggc cggcgccttc cgcgtcagga ggggctggtt
       61 agggcgagag accagaaata gctggaatgc tatcctaaac caaaaaaaat ctatttaaat
      121 acttttttaa tgttgcttaa atgaagaaag atatgttaaa catccaaaac tccacctgat
      181 aactattgag acactggtca atatgtcgct caatccaagt cgaccgtctt catcagagtt
      241 ggtggaactt catgtttttt atgtccctga aggatcgtgg aactataaat taaatactat
      301 ttcaatagaa gttattaaca actttatttc tgctggattt ataagagtgt ctcctcaact
      361 tactttacaa gctctgaggg agcgtcttgg tgagtttctt ggtgtagatg ctgttgcaga
      421 aaaattttta tttctgaaat gcattgggaa taatttagct gtggtaaagg aaaagcaaga
      481 atcagaattg aaactcaagt catttgctcc tccatatgca cttcaaccag aattatattt
      541 gcttcctgta atagatcact taggaaatgt ttattcagcg tcgacagtta atttagacga
      601 acagcagagt gttgatgata ctatggagat tgacggaaca atccacagac cagatagttt
      661 gtctttgtca aaggatgaac ctggagatcc aagtttgttg gaaaatacat ggagagactt
      721 tccaaatcac gaagaagctg aggaaagcca gcctacacaa cagcactttg gaaatcccag
      781 gttgccagga tcattggaag agtcagatga ttgtttgggg aacgtaaaaa gtccattcct
      841 ttggaaaaat aatgatgagg atgagggtga ggaggacgat aaggcaacca tcaacagaag
      901 gcaagccaaa ctggtgtgcg acaaggagca cagcgccctg ccagatctga ttgattttcc
      961 ttcatttcct tctcaacgtg tttcttcaag attagtggat acctcattat tgaaaattga
     1021 gagagaaaag attattgaac aaatgaagca agtaaaggaa gaacggaaat atctggaaaa
     1081 tattagagaa gaactaatta aaaaagttga aaagctgttt gaacaaagta aatcaaaacg
     1141 atatcatgcc tgtgatagct ggaagaaaaa atattttgac actaagaaag tcacagcatc
     1201 attggaggaa gtcttaacaa aacttcgaga agatttggaa ctttactata aaaaactgct
     1261 catgcagctt gaagccaggg agatcaagat gcgaccaagg aatctggcaa acatctcaga
     1321 ttctaagaat tatcttataa tccagatcac cgaagtacaa catgctattg accaacttaa
     1381 gagaaagttg gatactgata aaatgaaact catattagaa gttaagatga ggaaacaagc
     1441 agcttcggat ttacagacat taagagctga tctgacacag aagaaaatgg gtacaccttt
     1501 ccgatctcca atattttctg gaagtgtgcc gacctagggt tccacagatg aatgttgttt
     1561 gtgataaatc agccagatga acagggagca ttggcggctg caatacattc tgaccagatc
     1621 tgactttgct catcgtaaga catcacaaaa agaaagtcgc aggcatccgc aatcccagta
     1681 taattatagc accttttgtc tatgcccttt ggtgaccaag ctacatcaaa agttacctgt
     1741 gaaaaaacta catattattt acataacatt ttcttgcctt attctactca agaataaaga
     1801 aatacttata atggctgcat gtggaatcta acacaagtag aagagggcta ataaatatgt
     1861 tttgttactg caaaaaaaaa aaaaaaaaaa aaaaaaa
//
