LOCUS       NM_031792               1505 bp    mRNA    linear   ROD 11-DEC-2024
DEFINITION  Rattus norvegicus sperm associated antigen 4 (Spag4), mRNA.
ACCESSION   NM_031792
VERSION     NM_031792.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Shao,X., Tarnasky,H.A., Lee,J.P., Oko,R. and van der Hoorn,F.A.
  TITLE     Spag4, a novel sperm protein, binds outer dense-fiber protein Odf1
            and localizes to microtubules of manchette and axoneme
  JOURNAL   Dev Biol 211 (1), 109-123 (1999)
   PUBMED   10373309
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Tarnasky,H., Gill,D., Murthy,S., Shao,X., Demetrick,D.J. and van
            der Hoorn,F.A.
  TITLE     A novel testis-specific gene, SPAG4, whose product interacts
            specifically with outer dense fiber protein ODF27, maps to human
            chromosome 20q11.2
  JOURNAL   Cytogenet Cell Genet 81 (1), 65-67 (1998)
   PUBMED   9691178
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF043345.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF043345.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..1505
                     /gene="Spag4"
                     /note="sperm associated antigen 4"
                     /db_xref="GeneID:83623"
                     /db_xref="RGD:620151"
     exon            1..414
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     CDS             105..1439
                     /gene="Spag4"
                     /note="outer dense fiber-associated protein SPAG4; SUN
                     domain-containing protein 4; sperm antigen 4;
                     sperm-associated antigen 4 protein-like"
                     /codon_start=1
                     /product="sperm-associated antigen 4 protein"
                     /protein_id="NP_113980.1"
                     /db_xref="GeneID:83623"
                     /db_xref="RGD:620151"
                     /translation="MRRNPRPGSAASSHNHTPNFYSENSNSSHSATSGDSNGRRSAGP
                     ELGEPDGRMARGSSCGEPALSSGVPGGDTWAGSSRPKLAPRSHNGQTACGAATVRGGA
                     SEPSGSPAVLEEQLNLLPILDLRQEMPPPPVSKSFLSLFFQVLSVFLSLVADGLVCVY
                     REICSIRFLFTAVSLLSIFLAALWWGLLYLIPPLENEPKEMLTLSQYHHRVHSQGQQL
                     QQLQAELSKLHKEVTSVRAAHSERVAKLVFQRLNEDFVRKPDYALSSVGASIDLEKTS
                     SDYEDRNTAYFWNRLSFWNYARPPSVILEPDVFPGNCWAFEGEQGQVVIRLPGHVQLS
                     DITLQHPPPTVAHTGGASSAPRDFAVFGLQADDDETEVFLGKFIFEVQKSEIQTFHLQ
                     NDPPSAFPKVKIQILSNWGHPRFTCLYRVRAHGVRISESAEDNAMGVTGGPH"
     exon            415..519
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     exon            520..586
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     exon            587..648
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     exon            649..692
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     exon            693..718
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     exon            719..827
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     exon            828..903
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     exon            904..1019
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     exon            1020..1187
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     exon            1188..1280
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
     exon            1281..1461
                     /gene="Spag4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggggctcacg cagggtccta cccggcggcg cgaggcagct gagggagggc cgaaggcttt
       61 ggctgctgcg acttcggctt ccctgagggg tagcccaggt caggatgcgg cggaaccccc
      121 gcccaggctc ggccgcatcc tcccacaatc acacacccaa cttctacagc gagaacagca
      181 atagttccca cagcgcgact tcgggggaca gcaatgggcg ccggtccgct gggccggagc
      241 tcggggagcc cgatggcaga atggcccggg gctccagctg tggtgagccc gccttaagct
      301 caggagtgcc cggaggagac acatgggcag gaagctctcg gccgaagctg gcgcctcgga
      361 gccacaatgg gcagaccgcc tgtggcgcgg caaccgtgag gggcggggcc tcggaaccgt
      421 ctgggtctcc tgcagtcttg gaggaacaac tcaaccttct cccgatactg gatctgaggc
      481 aggagatgcc tcccccgccg gtgtccaaga gcttcctgag cctcttcttt caggtgctca
      541 gcgtgttttt atccttggta gccgacgggc tggtctgtgt gtacagggaa atctgctcca
      601 tccgcttcct gttcaccgct gtgtcgctcc tgagcatttt tctggcagca ctctggtggg
      661 ggctcctgta cctgatccct cctttggaga atgaacctaa ggagatgctg actctaagcc
      721 aataccacca ccgcgtgcac tcccagggcc agcaactgca gcagctccag gcagaactga
      781 gtaaactcca caaggaggtg accagtgttc gtgcagccca cagtgagaga gtggccaagc
      841 tcgtgttcca gaggctgaat gaggacttcg tgcgcaagcc tgactatgca ttgagctctg
      901 tgggagcctc catcgacctg gagaagacat ccagtgacta cgaggaccgg aatactgcct
      961 acttctggaa ccgattaagc ttctggaact acgcccgccc accctctgtc atattggagc
     1021 cagatgtgtt ccctggaaat tgctgggctt ttgaaggtga gcaaggccag gtggtgatcc
     1081 gactgccagg tcatgtgcag ttaagcgaca tcaccctgca gcaccctcca cccactgtgg
     1141 cacacaccgg aggagccagc agtgcgcccc gggacttcgc agtctttggg ctccaagctg
     1201 atgatgacga gactgaagtg ttcttgggaa aattcatctt tgaagtgcag aaatctgaaa
     1261 ttcagacttt ccacctccag aatgaccctc catctgcctt ccccaaggtg aagattcaga
     1321 ttttaagcaa ctggggccac ccacgcttca catgcttata tcgagtccgt gcccatggtg
     1381 tgcggatttc agagtcggca gaggataatg ccatgggggt cacaggggga ccccattaaa
     1441 atgctgatgg ttggagtaga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1501 aaaaa
//
