LOCUS       NM_001304424             398 bp    mRNA    linear   ROD 07-MAY-2024
DEFINITION  Rattus norvegicus sperm associated antigen 11b (Spag11b), mRNA.
ACCESSION   NM_001304424 NM_001037850 XM_002728419 XM_008773331
VERSION     NM_001304424.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 398)
  AUTHORS   Ribeiro,C.M., Queiroz,D.B., Patrao,M.T., Denadai-Souza,A.,
            Romano,R.M., Silva,E.J. and Avellar,M.C.
  TITLE     Dynamic changes in the spatio-temporal expression of the
            beta-defensin SPAG11C in the developing rat epididymis and its
            regulation by androgens
  JOURNAL   Mol Cell Endocrinol 404, 141-150 (2015)
   PUBMED   25657045
  REMARK    GeneRIF: Results from the spatio-temporal expression, cellular
            distribution showed that SPAG11C may play a role in epididymal
            development and/or sperm function.
REFERENCE   2  (bases 1 to 398)
  AUTHORS   Yenugu,S., Hamil,K.G., French,F.S. and Hall,S.H.
  TITLE     Antimicrobial actions of human and macaque sperm associated antigen
            (SPAG) 11 isoforms: influence of the N-terminal peptide
  JOURNAL   Mol Cell Biochem 284 (1-2), 25-37 (2006)
   PUBMED   16411022
REFERENCE   3  (bases 1 to 398)
  AUTHORS   Patil,A.A., Cai,Y., Sang,Y., Blecha,F. and Zhang,G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On or before May 2, 2024 this sequence version replaced
            NM_001037850.1, NM_001304424.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR23984936.1005444.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06621351 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-81                JAXUCZ010000016.1  77402473-77402553   c
            82-228              JAXUCZ010000016.1  77401807-77401953   c
            229-398             JAXUCZ010000016.1  77400550-77400719   c
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..398
                     /gene="Spag11b"
                     /gene_synonym="Spag11; Spag11bl; Spag11c"
                     /note="sperm associated antigen 11b"
                     /db_xref="GeneID:100362580"
                     /db_xref="RGD:1562239"
     exon            1..81
                     /gene="Spag11b"
                     /gene_synonym="Spag11; Spag11bl; Spag11c"
                     /inference="alignment:Splign:2.1.0"
     CDS             21..362
                     /gene="Spag11b"
                     /gene_synonym="Spag11; Spag11bl; Spag11c"
                     /note="sperm associated antigen 11C-like; sperm associated
                     antigen 11b-like"
                     /codon_start=1
                     /product="sperm associated antigen 11b-like precursor"
                     /protein_id="NP_001291353.2"
                     /db_xref="GeneID:100362580"
                     /db_xref="RGD:1562239"
                     /translation="MKRRLLPSFVSLLLAALLLPGSSSASSINHLVTEPPSSPQDEFP
                     AQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCS
                     KKKEACCLHPF"
     exon            82..228
                     /gene="Spag11b"
                     /gene_synonym="Spag11; Spag11bl; Spag11c"
                     /inference="alignment:Splign:2.1.0"
     exon            229..398
                     /gene="Spag11b"
                     /gene_synonym="Spag11; Spag11bl; Spag11c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgcagtcct ctccacagcc atgaaacgga gactccttcc ttcctttgtc agcctcctcc
       61 ttgcagccct gctccttcca gggtcgtcca gtgcctcgtc cattaaccac ttagtcactg
      121 aaccccccag ttccccccag gacgaatttc ctgcccaagg aggaaatggg tctgggttgt
      181 tgcatcacag agtgaaacgc ttccctccac gcaccccccc ttaccatgag cctggaccaa
      241 attaccaaat tgtcaactgc aagaaaaatg agggattctg tcaaaaatac tgtaatttta
      301 tggaaacaca agtgggctac tgttcaaaaa agaaagaagc ctgctgctta catcccttct
      361 gacggggctg atcactgaag ctgaagtgac ctgcacac
//
