LOCUS       NM_001401818             856 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus sperm acrosome associated 9 (Spaca9), transcript
            variant 1, mRNA.
ACCESSION   NM_001401818 XM_006233763
VERSION     NM_001401818.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 856)
  AUTHORS   Stauber,M., Weidemann,M., Dittrich-Breiholz,O., Lobschat,K.,
            Alten,L., Mai,M., Beckers,A., Kracht,M. and Gossler,A.
  TITLE     Identification of FOXJ1 effectors during ciliogenesis in the foetal
            respiratory epithelium and embryonic left-right organiser of the
            mouse
  JOURNAL   Dev Biol 423 (2), 170-188 (2017)
   PUBMED   27914912
REFERENCE   2  (bases 1 to 856)
  AUTHORS   Bhattacharya,R., Devi,M.S., Dhople,V.M. and Jesudasan,R.A.
  TITLE     A mouse protein that localizes to acrosome and sperm tail is
            regulated by Y-chromosome
  JOURNAL   BMC Cell Biol 14, 50 (2013)
   PUBMED   24256100
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 856)
  AUTHORS   Fong,K.W., Leung,J.W., Li,Y., Wang,W., Feng,L., Ma,W., Liu,D.,
            Songyang,Z. and Chen,J.
  TITLE     MTR120/KIAA1383, a novel microtubule-associated protein, promotes
            microtubule stability and ensures cytokinesis
  JOURNAL   J Cell Sci 126 (Pt 3), 825-837 (2013)
   PUBMED   23264731
REFERENCE   4  (bases 1 to 856)
  AUTHORS   Chen,X., Hu,T., Liang,G., Yang,M., Zong,S., Miao,S., Koide,S.S. and
            Wang,L.
  TITLE     A novel testis protein, RSB-66, interacting with INCA1 (inhibitor
            of Cdk interacting with cyclin A1)
  JOURNAL   Biochem Cell Biol 86 (4), 345-351 (2008)
   PUBMED   18756329
  REMARK    GeneRIF: When being transfected into HeLa cells, RSB-66 and INCA1
            were found to be co-localized principally in the cytoplasm. The
            alpha helix in the RSB-66 C terminal and two amino acid residues
            (tyr117 and his119) appear to be crucial for its function
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Feb 25, 2022 this sequence version replaced XM_006233763.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.15701.1,
                                           SRR22582416.772640.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-70                JAXUCZ010000003.1  32426208-32426277   c
            71-247              JAXUCZ010000003.1  32421180-32421356   c
            248-450             JAXUCZ010000003.1  32418886-32419088   c
            451-856             JAXUCZ010000003.1  32417926-32418331   c
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p12"
     gene            1..856
                     /gene="Spaca9"
                     /gene_synonym="Rsb66"
                     /note="sperm acrosome associated 9"
                     /db_xref="GeneID:296610"
                     /db_xref="RGD:727909"
     exon            1..70
                     /gene="Spaca9"
                     /gene_synonym="Rsb66"
                     /inference="alignment:Splign:2.1.0"
     exon            71..247
                     /gene="Spaca9"
                     /gene_synonym="Rsb66"
                     /inference="alignment:Splign:2.1.0"
     CDS             104..787
                     /gene="Spaca9"
                     /gene_synonym="Rsb66"
                     /note="isoform 1 is encoded by transcript variant 1;
                     Rsb-66 protein; sperm acrosome-associated protein 9;
                     uncharacterized protein C9orf9 homolog"
                     /codon_start=1
                     /product="sperm acrosome-associated protein 9 isoform 1"
                     /protein_id="NP_001388747.1"
                     /db_xref="GeneID:296610"
                     /db_xref="RGD:727909"
                     /translation="MNEVKESLRSIEQKYKLFQQQQFTFIAALEHCRENAHDKIRPIS
                     SIEQVQSYMEHYCNNSTDRRILLMFMDICSELNKLCQHFEALHSGTPVTNSLLEKCKT
                     LVSQSNDLSILRAKYPHDVVNHLSCDEARNHYGGVVSLIPIVLDLMKEWIAHSEKLPR
                     KVLQHVSEILGNLATPAPAATSPAQTTVTQKWLGKHKYRQLAKESLKPSSKNKASLKP
                     PWRPPGGKL"
     exon            248..450
                     /gene="Spaca9"
                     /gene_synonym="Rsb66"
                     /inference="alignment:Splign:2.1.0"
     exon            451..856
                     /gene="Spaca9"
                     /gene_synonym="Rsb66"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acacacccac ggaggcactg caagcttctg ggcagtctgt gaggcgaagg ccagtccaag
       61 tcaaaccagg acccttcctg tcctgtggga cctaacagca acaatgaatg aggtgaaaga
      121 gtccctccgc agcatcgagc agaagtacaa actctttcag cagcaacagt tcaccttcat
      181 tgctgctctg gagcactgcc gggagaatgc ccacgacaaa atccggccca tctccagtat
      241 cgagcaggtg cagagctaca tggaacatta ctgcaataac tccaccgacc ggcggattct
      301 gctcatgttc atggacatct gctcggagct caacaaactg tgccagcact ttgaggcctt
      361 gcactccggc acccctgtca ccaacagcct tctcgagaaa tgcaaaaccc tggttagcca
      421 gagcaatgac ttgagcatcc tcagagcaaa gtacccgcat gatgtggtga accacctcag
      481 ctgtgatgag gccaggaacc actatggagg tgtggtcagc ctcatcccca tagtcctgga
      541 cctaatgaaa gagtggatcg ctcattccga gaagctgcct cgcaaagtgc tgcagcatgt
      601 gagtgagatc ctgggtaacc tggcaactcc agcaccagcc gccaccagcc ctgcccagac
      661 cacggttacc cagaagtggt taggaaaaca caagtatagg cagcttgcaa aagagagcct
      721 caaacctagt tcgaagaaca aagcctccct gaaacctccc tggaggccgc ctggtgggaa
      781 actgtaactg atgtcaatgt acttggcttc cactggtcat attctcactg ggggccaata
      841 cactattgag aatctc
//
