LOCUS       NM_001191982             984 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus sperm acrosome associated 1 (Spaca1), mRNA.
ACCESSION   NM_001191982 XM_575794
VERSION     NM_001191982.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Fujihara,Y., Oji,A., Larasati,T., Kojima-Kita,K. and Ikawa,M.
  TITLE     Human Globozoospermia-Related Gene Spata16 Is Required for Sperm
            Formation Revealed by CRISPR/Cas9-Mediated Mouse Models
  JOURNAL   Int J Mol Sci 18 (10), 2208 (2017)
   PUBMED   29065458
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 984)
  AUTHORS   Fujihara,Y., Satouh,Y., Inoue,N., Isotani,A., Ikawa,M. and Okabe,M.
  TITLE     SPACA1-deficient male mice are infertile with abnormally shaped
            sperm heads reminiscent of globozoospermia
  JOURNAL   Development 139 (19), 3583-3589 (2012)
   PUBMED   22949614
REFERENCE   3  (bases 1 to 984)
  AUTHORS   Jones,R., James,P.S., Oxley,D., Coadwell,J., Suzuki-Toyota,F. and
            Howes,E.A.
  TITLE     The equatorial subsegment in mammalian spermatozoa is enriched in
            tyrosine phosphorylated proteins
  JOURNAL   Biol Reprod 79 (3), 421-431 (2008)
   PUBMED   18448843
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jul 17, 2010 this sequence version replaced XM_575794.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.717259.1,
                                           SRR26360181.572730.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760434 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-223               JAXUCZ010000005.1  53336635-53336857   c
            224-280             JAXUCZ010000005.1  53331275-53331331   c
            281-382             JAXUCZ010000005.1  53328933-53329034   c
            383-489             JAXUCZ010000005.1  53327850-53327956   c
            490-625             JAXUCZ010000005.1  53326707-53326842   c
            626-746             JAXUCZ010000005.1  53322440-53322560   c
            747-984             JAXUCZ010000005.1  53321741-53321978   c
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q21"
     gene            1..984
                     /gene="Spaca1"
                     /gene_synonym="RGD1560284"
                     /note="sperm acrosome associated 1"
                     /db_xref="GeneID:500432"
                     /db_xref="RGD:1560284"
     CDS             1..903
                     /gene="Spaca1"
                     /gene_synonym="RGD1560284"
                     /note="sperm acrosome membrane-associated protein 1"
                     /codon_start=1
                     /product="sperm acrosome membrane-associated protein 1
                     precursor"
                     /protein_id="NP_001178911.1"
                     /db_xref="GeneID:500432"
                     /db_xref="RGD:1560284"
                     /translation="MRARGAGCPAWLLALGWLILVGLQASQASNVTSSIQDPGMAREG
                     ESSSENEPEEEIENEGEVVETDTTIEAEEEVQNKTVVKEVEFGMCTVTCGVGIREVIL
                     TNGCPGGESKCVVRVEECRGPVDCGWGRPISESLESARLSCIHISPENRFKYIWKLLK
                     PDQQPVILINDSAVLEVPRELHPMAFECDTLDNNEMVASVKFTVYTTTELQMKRSTRP
                     DTDAVLVFVLTIGVIICIFVIFVLIFIIINWAAVKSFWGAKASTTEIQSEMSSMRYKD
                     STSLDQSPTDIPVHEDDALSEWNE"
     exon            1..223
                     /gene="Spaca1"
                     /gene_synonym="RGD1560284"
                     /inference="alignment:Splign:2.1.0"
     exon            224..280
                     /gene="Spaca1"
                     /gene_synonym="RGD1560284"
                     /inference="alignment:Splign:2.1.0"
     exon            281..382
                     /gene="Spaca1"
                     /gene_synonym="RGD1560284"
                     /inference="alignment:Splign:2.1.0"
     exon            383..489
                     /gene="Spaca1"
                     /gene_synonym="RGD1560284"
                     /inference="alignment:Splign:2.1.0"
     exon            490..625
                     /gene="Spaca1"
                     /gene_synonym="RGD1560284"
                     /inference="alignment:Splign:2.1.0"
     exon            626..746
                     /gene="Spaca1"
                     /gene_synonym="RGD1560284"
                     /inference="alignment:Splign:2.1.0"
     exon            747..984
                     /gene="Spaca1"
                     /gene_synonym="RGD1560284"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcgcgcca ggggcgctgg ctgccccgct tggctgctgg ccctcggatg gctgatcctg
       61 gtgggcctgc aggcctcgca ggcatcgaat gtcacctcct ccatccagga tcccggcatg
      121 gcccgcgagg gcgagagcag cagcgagaac gagcccgagg aggagattga gaacgaaggc
      181 gaagtggttg agactgatac cacgatcgag gccgaggaag aggttcagaa caaaacagta
      241 gtcaaggaag tagaattcgg aatgtgcaca gtcacgtgtg gtgttggtat cagagaagta
      301 attttaacca atggatgccc tggaggtgaa tccaaatgtg ttgttcgtgt ggaagaatgc
      361 cgtggacctg ttgattgtgg ctggggtaga ccaatttctg aaagtcttga aagtgctaga
      421 ctatcatgta tccatatatc tcctgaaaat cgtttcaaat atatatggaa gctcctaaag
      481 ccagatcaac aacctgttat actgataaat gactcagcag tcctggaagt accaagagaa
      541 cttcatccta tggctttcga gtgtgacacc ttggataata atgaaatggt ggcatctgtt
      601 aagttcacag tctatacaac aactgaattg cagatgaaaa gatccaccag accagacact
      661 gatgccgtct tagtcttcgt gctgaccata ggagtcatca tctgcatatt tgtgatcttt
      721 gtattgattt tcataatcat aaattgggcg gcagtgaaat ccttctgggg ggcaaaagcc
      781 tcaacaactg agatacagtc cgagatgagc tctatgaggt acaaagattc gacatcactt
      841 gaccagtcac caacagatat acctgtacat gaagacgatg ctttaagtga atggaatgaa
      901 tgatgtatgg atgacatatg agaaactaga gaccattaga acatatcaga ttcattatta
      961 tgaaaataaa atatatactg aaaa
//
