LOCUS       NM_001191902            1484 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus Sp9 transcription factor (Sp9), mRNA.
ACCESSION   NM_001191902 XM_345371
VERSION     NM_001191902.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1484)
  AUTHORS   Kawakami,Y., Esteban,C.R., Matsui,T., Rodriguez-Leon,J., Kato,S.
            and Izpisua Belmonte,J.C.
  TITLE     Sp8 and Sp9, two closely related buttonhead-like transcription
            factors, regulate Fgf8 expression and limb outgrowth in vertebrate
            embryos
  JOURNAL   Development 131 (19), 4763-4774 (2004)
   PUBMED   15358670
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000003.1.
            
            On Jul 17, 2010 this sequence version replaced XM_345371.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760393,
                              SAMEA5760433 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-21                JAXUCZ010000003.1  78554345-78554365
            22-1484             JAXUCZ010000003.1  78555413-78556875
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q23"
     gene            1..1484
                     /gene="Sp9"
                     /gene_synonym="RGD1559457"
                     /note="Sp9 transcription factor"
                     /db_xref="GeneID:366078"
                     /db_xref="RGD:1559457"
     CDS             1..1458
                     /gene="Sp9"
                     /gene_synonym="RGD1559457"
                     /note="trans-acting transcription factor 9"
                     /codon_start=1
                     /product="transcription factor Sp9"
                     /protein_id="NP_001178831.1"
                     /db_xref="GeneID:366078"
                     /db_xref="RGD:1559457"
                     /translation="MATSILGEEPRFGTTPLAMLAATCNKIGNTSPLTTLPESSAFAK
                     GGFHPWKRSSSSCNLGSSLSGFAVATGGRGSGSLAGGSGAANSAFCLASTSPTSSAFS
                     SDYGGLFSNSAAAAAAAAGVSPQEAGGQSAFISKVHTTAADGLYPRVGMAHPYESWYK
                     SGFHSTLAAGEVTNGAASSWWDVHSSPGSWLEVQNPAGGLQSSLHSGAPQASLHSQLG
                     TYNPDFSSLTHSAFSSTGLGSSAAAASHLLSTSQHLLAQDGFKPVLPSYSDSSAAVAA
                     AAASAMISGAAAAAAGGSSARSARRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSC
                     HIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRF
                     ACPVCNKRFMRSDHLSKHIKTHNGGGGGKKGSDSDTDASNLETPRSESPDLILHDSGV
                     SAARAAAAAAAAAAAAAAAAASAGGKEAATGPNDS"
     exon            1..21
                     /gene="Sp9"
                     /gene_synonym="RGD1559457"
                     /inference="alignment:Splign:2.1.0"
     exon            22..1484
                     /gene="Sp9"
                     /gene_synonym="RGD1559457"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggccacgt ctatacttgg ggaagagcca cgcttcggaa cgaccccgtt ggccatgctg
       61 gcggcgacct gcaacaagat cggcaacacg agccccctga cgacactgcc cgagtccagc
      121 gcctttgcca aaggcggctt ccacccctgg aagcgctcct cgtccagctg caacctcggc
      181 tccagcctct ccggcttcgc tgtggccacg ggcggccgcg gctcgggcag cctggcgggt
      241 ggctcgggag ccgccaacag cgccttctgc ctagcctcca cgtcccccac gtcgtccgcc
      301 ttcagcagcg actacggcgg ccttttctcc aactcggcag cggcggcggc cgcggcggcc
      361 ggcgtgtccc cgcaggaggc gggcggccag tcggccttca tctccaaggt gcatacgacg
      421 gcggccgacg gcctgtaccc gcgcgtgggc atggcgcacc cgtacgagtc gtggtacaag
      481 tcgggcttcc actcgacgct ggcggcgggc gaggtgacca acggcgcggc gtcgtcgtgg
      541 tgggacgtgc acagcagccc cgggtcctgg ctggaggtgc agaaccccgc cggggggctg
      601 cagagctcgc tgcactcggg cgccccccag gcctcgctgc actcgcagct gggcacctac
      661 aaccccgact tcagctcgct cacccactcg gcttttagct ccaccggcct cggctcctcg
      721 gccgccgccg cctcgcacct gctctccacc agccagcacc tcctggccca ggacggcttc
      781 aagccagtgc tgccctccta ctcggactcc agcgccgcgg tggccgcggc ggccgccagc
      841 gctatgatct caggcgccgc ggcggcggcc gccgggggca gctccgcgcg ctccgctcgt
      901 cgctactccg gccgtgccac ctgcgactgc cccaactgcc aggaggccga gcggctgggt
      961 ccggccgggg caagcctacg acgcaagggg ctgcacagct gtcacatccc gggctgcggc
     1021 aaggtgtacg gcaagacgtc gcacctgaag gcgcacctgc gctggcacac gggcgagcgg
     1081 cccttcgtgt gcaactggct cttctgcggc aagcgcttca cgcgttcgga cgagctgcag
     1141 cggcacctgc ggactcacac gggcgagaag cgcttcgcct gcccggtgtg caacaagcgt
     1201 ttcatgcgca gcgaccacct gagcaaacac attaagacgc acaacggggg cggcgggggc
     1261 aaaaagggca gcgacagtga cacggacgcc agcaacctgg agacgccccg ctccgagtcc
     1321 ccggacctca tcctgcacga ttccggcgtc agtgcagccc gggcggctgc ggcggccgcg
     1381 gcggcggctg cagcggcggc ggcggcggca gcttcggcgg gaggcaagga agctgcgacc
     1441 ggtcccaacg actcctagag gttggcggag aggtgcgagc gagc
//
