LOCUS       NM_001034137            1783 bp    mRNA    linear   ROD 11-DEC-2024
DEFINITION  Rattus norvegicus SP110 nuclear body protein (Sp110), mRNA.
ACCESSION   NM_001034137 XM_217470
VERSION     NM_001034137.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Archambaud,C., Nahori,M.A., Soubigou,G., Becavin,C., Laval,L.,
            Lechat,P., Smokvina,T., Langella,P., Lecuit,M. and Cossart,P.
  TITLE     Impact of lactobacilli on orally acquired listeriosis
  JOURNAL   Proc Natl Acad Sci U S A 109 (41), 16684-16689 (2012)
   PUBMED   23012479
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Pan,H., Yan,B.S., Rojas,M., Shebzukhov,Y.V., Zhou,H., Kobzik,L.,
            Higgins,D.E., Daly,M.J., Bloom,B.R. and Kramnik,I.
  TITLE     Ipr1 gene mediates innate immunity to tuberculosis
  JOURNAL   Nature 434 (7034), 767-772 (2005)
   PUBMED   15815631
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC105751.1.
            
            On Oct 14, 2005 this sequence version replaced XM_217470.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC105751.1, SRR8487227.116431.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q35"
     gene            1..1783
                     /gene="Sp110"
                     /note="SP110 nuclear body protein"
                     /db_xref="GeneID:301570"
                     /db_xref="RGD:1310173"
     exon            1..105
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            106..253
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     CDS             107..1543
                     /gene="Sp110"
                     /note="intracellular pathogen resistance protein 1"
                     /codon_start=1
                     /product="sp110 nuclear body protein"
                     /protein_id="NP_001029309.1"
                     /db_xref="GeneID:301570"
                     /db_xref="RGD:1310173"
                     /translation="MFTLTKALEKALLQHFIYTKLDIAYAINKPFPFFEALRDNSFIT
                     ERMYKESLEACQNLVPLSKVVHNILTSLEQTFDPSMLLILFSKVNLREYPSLGAICRS
                     FRNVGNAYEGRNRPAPTLLGASTNPAEGCSFQTLLPQPRSQALPPSHLSSGLRIRDPG
                     TTSLQITEILDEQPSPSHPAAPLPGYIREGKTTPVSSRDHQRKDKEDSQEMPHHPSGP
                     EAVVKDILTSKTNNRDDSGAQPPGSPGTMHVVQDNSPAPNDPEVPQEAPCTPANKKAR
                     KRKSCIWSNSKRRRQKKKPPQHKMMGVASPGPGVQEKLKVVGQRTLNQDDSTRNVKVV
                     TRTLRERTRCAQTSSSQEISKEASKPRARKRPQKRPHTAGRTIHVPEKSKDDAVDFLS
                     PTLSVTCGEARGTLFKEKLKQGSSEKCIQNEAGAWLTVKEFLKKGGKATSKDWKKAIR
                     CNKKTLRSLEQDGFLFCTSKSKPQKECD"
     exon            254..422
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            423..689
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            690..767
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            768..851
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            852..929
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            930..1010
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            1011..1160
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            1161..1241
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            1242..1346
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            1347..1489
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
     exon            1490..1762
                     /gene="Sp110"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gactaggctg gctggctttt ccaggcagga tccaggaacc tcttaattaa tcctggagtg
       61 acctgggaga acctgggaga tccccgttgg caacccggca tccaggatgt tcaccctgac
      121 caaggccttg gaaaaggctc ttcttcagca tttcatatac acgaagctgg acatcgccta
      181 tgccatcaac aagccgttcc ccttctttga agcactccga gacaattcct tcatcactga
      241 gcgaatgtac aaggaatctc tggaagcctg tcaaaatctg gtccctctat ccaaagtggt
      301 gcacaatatt ctcaccagtc tggagcagac tttcgaccca tcgatgctgc tgatattgtt
      361 cagcaaagtc aacctacggg aataccccag tctgggggca atttgtagaa gcttcagaaa
      421 tgttggcaat gcctatgaag ggagaaacag acccgcacca accctacttg gagcctcaac
      481 caacccagca gaagggtgct cctttcagac tctgctgcca cagccccgat cccaggcatt
      541 gccaccaagt catctgtcct ctggactgag aatccgtgac cccggaacaa cctcactgca
      601 aatcactgag atcctggatg agcagcccag cccttcccac ccagctgctc ctctccctgg
      661 ctacattcgg gaaggaaaaa ccactccagt gtcctcaaga gatcaccaga gaaaagataa
      721 ggaagactct caagagatgc cccaccatcc ctcaggaccc gaagcagttg tcaaagacat
      781 cttaacatcc aagactaaca atcgagatga ctcaggagca cagcctccgg gttctcctgg
      841 caccatgcat gtggttcaag ataattctcc agcaccaaat gacccggaag tgccccagga
      901 agctccctgc acacctgcaa acaagaaagc aagaaaaaga aaaagttgca tctggtcaaa
      961 ttccaaaaga agacggcaga aaaaaaagcc ccctcaacat aagatgatgg gagtggcctc
     1021 acctggacct ggagttcagg agaagctcaa ggtggtgggg cagaggactc tgaatcagga
     1081 tgactcaact aggaacgtga aggtagtgac caggactctg agggaaagga ctcgctgtgc
     1141 ccagacatcc agttctcaag agatcagcaa ggaagcatca aaaccaaggg ctagaaagag
     1201 gcctcagaag aggccccaca cagcaggaag aaccatacac gttccagaaa agtccaagga
     1261 cgatgctgtg gattttctct ctcctacact ctctgtgacc tgtggtgagg ccagagggac
     1321 tttgttcaaa gagaaactga agcaaggatc ctcagaaaag tgcattcaga atgaggcggg
     1381 agcttggctg actgtaaagg agtttttaaa gaaaggggga aaggccacgt caaaagattg
     1441 gaagaaagct atccgttgta acaagaagac attaagaagt ctggagcagg atggattttt
     1501 gttctgtact tccaaaagta agcctcaaaa agagtgtgac tagcggatga gctcctgaac
     1561 tatgcttagc tgttgtgtgc tgtcttcagt gtctgaactt tgccttcgag tctctgagtg
     1621 tcccagcttc atgttcgtgt agggcaactc atcacaactg gtccagcact gagtacacgc
     1681 tcccgatgcc tttgttcaca gctgacttgc aatagaaaag tacatgaatc ttagaaaata
     1741 aagatatagc tgttagtgtc taaaaaaaaa aaaaaaaaaa aaa
//
