LOCUS       NM_001168650            1020 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus SRY-box transcription factor 12 (Sox12), mRNA.
ACCESSION   NM_001168650 XM_001072817
VERSION     NM_001168650.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Tanaka,S., Suto,A., Iwamoto,T., Kageyama,T., Tamachi,T.,
            Takatori,H., Suzuki,K., Hirose,K., Ohara,O., Lefebvre,V. and
            Nakajima,H.
  TITLE     Sox12 promotes T reg differentiation in the periphery during
            colitis
  JOURNAL   J Exp Med 215 (10), 2509-2519 (2018)
   PUBMED   30190287
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Hoser,M., Potzner,M.R., Koch,J.M., Bosl,M.R., Wegner,M. and Sock,E.
  TITLE     Sox12 deletion in the mouse reveals nonreciprocal redundancy with
            the related Sox4 and Sox11 transcription factors
  JOURNAL   Mol Cell Biol 28 (15), 4675-4687 (2008)
   PUBMED   18505825
REFERENCE   3  (bases 1 to 1020)
  AUTHORS   Dy,P., Penzo-Mendez,A., Wang,H., Pedraza,C.E., Macklin,W.B. and
            Lefebvre,V.
  TITLE     The three SoxC proteins--Sox4, Sox11 and Sox12--exhibit overlapping
            expression patterns and molecular properties
  JOURNAL   Nucleic Acids Res 36 (9), 3101-3117 (2008)
   PUBMED   18403418
REFERENCE   4  (bases 1 to 1020)
  AUTHORS   Jay,P., Sahly,I., Goze,C., Taviaux,S., Poulat,F., Couly,G.,
            Abitbol,M. and Berta,P.
  TITLE     SOX22 is a new member of the SOX gene family, mainly expressed in
            human nervous tissue
  JOURNAL   Hum Mol Genet 6 (7), 1069-1077 (1997)
   PUBMED   9215677
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Dec 13, 2009 this sequence version replaced XM_001072817.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582416.242035.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1020              JAXUCZ010000003.1  161319800-161320819 c
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..1020
                     /gene="Sox12"
                     /note="SRY-box transcription factor 12"
                     /db_xref="GeneID:689988"
                     /db_xref="RGD:1586313"
     exon            1..1020
                     /gene="Sox12"
                     /inference="alignment:Splign:2.1.0"
     CDS             1..945
                     /gene="Sox12"
                     /note="SRY-box containing gene 12; SRY (sex determining
                     region Y)-box 12; SRY box 12"
                     /codon_start=1
                     /product="transcription factor SOX-12"
                     /protein_id="NP_001162121.1"
                     /db_xref="GeneID:689988"
                     /db_xref="RGD:1586313"
                     /translation="MVQQRGARAKRDGGPPPPGPGPAAEGAREPGWCKTPSGHIKRPM
                     NAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMA
                     DYPDYKYRPRKKSKGAPAKARPRPPGGGGGGSRLKPGPQLPGRGGRRATGGPLGGGAA
                     APEDDDEDEEEELLEVRLLETPGRELWRMVPAGRAARGPAERAQGPSSEGAAASAASP
                     TLSEDEEPEEEEEEAATAEEGEEETVASGEEPLGFLSRMPPGPTGLDCSALDRDPDLL
                     PPSGTSHFEFPDYCTPEVTEMIAGDWRPSSIADLVFTY"
ORIGIN      
        1 atggtgcagc agcggggcgc gcgggccaag cgggacggcg ggccgccgcc cccggggccc
       61 gggccggccg ccgagggggc gcgcgagcca ggctggtgca agaccccgag cggccacatc
      121 aagcggccga tgaacgcgtt catggtgtgg tctcagcacg agcggcgaaa gatcatggac
      181 cagtggcccg acatgcacaa cgctgagatc tccaagcgcc tgggccgccg ctggcagctg
      241 ctgcaggact cggagaagat tccgttcgtg cgggaggcgg agcggctgcg cctcaagcac
      301 atggcggact acccggacta caagtaccgg cctcgcaaga agagcaaggg ggcgcccgcc
      361 aaggcgcggc cccgcccccc cggaggcggc ggtggtggca gtcggctgaa acccgggcca
      421 cagctgccgg gccgcggggg ccgccgagcg acgggaggac ctctgggggg cggcgcggcg
      481 gcgccggagg acgacgacga agacgaagag gaggagctgc tggaagtacg cctgctggag
      541 acccccgggc gcgagctgtg gaggatggtc ccggcggggc gcgccgcccg cggacccgcg
      601 gagcgcgcgc aggggccatc cagcgagggg gcggccgcta gcgccgcctc tccgaccctg
      661 tcggaggacg aggagccgga ggaagaggag gaggaggcgg ctacagcaga ggagggcgaa
      721 gaggagacgg tggcatcggg ggaggagccg ctgggctttc tgtccaggat gcccccgggc
      781 cccaccggcc tggactgcag tgccctggac cgcgacccag acctgctgcc cccttcgggc
      841 acgtcacatt tcgaattccc ggactactgc acccctgagg ttaccgagat gatcgcaggg
      901 gactggcgcc cgtctagtat cgccgacctg gttttcacct actgagccca ccgtcagcgg
      961 ggcgcgcacg cccccaaacc agctgtttac atacaggaat caggtattgg ggcccctcgg
//
