LOCUS       NM_001105912            2617 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus sorting nexin 8 (Snx8), mRNA.
ACCESSION   NM_001105912 XM_001065004 XM_221947
VERSION     NM_001105912.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2617)
  AUTHORS   van Weering,J.R., Sessions,R.B., Traer,C.J., Kloer,D.P.,
            Bhatia,V.K., Stamou,D., Carlsson,S.R., Hurley,J.H. and Cullen,P.J.
  TITLE     Molecular basis for SNX-BAR-mediated assembly of distinct endosomal
            sorting tubules
  JOURNAL   EMBO J 31 (23), 4466-4480 (2012)
   PUBMED   23085988
REFERENCE   2  (bases 1 to 2617)
  AUTHORS   Dyve,A.B., Bergan,J., Utskarpen,A. and Sandvig,K.
  TITLE     Sorting nexin 8 regulates endosome-to-Golgi transport
  JOURNAL   Biochem Biophys Res Commun 390 (1), 109-114 (2009)
   PUBMED   19782049
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474012.1.
            
            [WARNING] On Mar 13, 2025 this sequence was replaced by
            NM_001105912.2.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_221947.4, XM_001065004.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMD00132261, SAMD00132262
                              [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2617
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q11"
     gene            1..2617
                     /gene="Snx8"
                     /note="sorting nexin 8"
                     /db_xref="GeneID:288504"
                     /db_xref="RGD:1305791"
     exon            1..122
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..1420
                     /gene="Snx8"
                     /codon_start=1
                     /product="sorting nexin-8"
                     /protein_id="NP_001099382.1"
                     /db_xref="GeneID:288504"
                     /db_xref="RGD:1305791"
                     /translation="MTGRAMDPLPSPAVAAAAEAEADEEADPPATGPQTSQVTEWRNL
                     DPRRMQMPQGNPLLLSYTLQELLAKDTVQVELIPEKKGLFLKHVEYEVSSQRFKSSVY
                     RRYNDFVVFHEVLLHKFPYRMVPALPPKRVLGADREFIEGRRRALKRFINLVARHPPF
                     SEDVLLKLFLSFSGSDVQHKLKEAAQCVGDEFTNCKLAARAKDFLPADIQTQFAMSRE
                     LIRNVYNSFYKLRDRAERIASRAIDNAADLLIFGKELRQVTLALGSDTTPLPSWAALH
                     LSTWGSLKQALKGLSVEFALLADKAAQQGKKEENDVVEKLNLFLDLLQSYKDLCERHE
                     KGVLHKHQRALHKYGLMKRQMMSAAHGREPESVEQLESRIVEQENVIQTMELRNYFSL
                     YCLHQETQLVHVYLPLTSHILGAFVNSQIQGHKEMSKVWNDLKPKLSCLFAGPHSVLT
                     PPRSPQEDGMCPH"
     exon            123..313
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
     exon            314..431
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
     exon            432..553
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
     exon            554..634
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
     exon            635..807
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
     exon            808..940
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
     exon            941..1009
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
     exon            1010..1156
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
     exon            1157..1306
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
     exon            1307..2617
                     /gene="Snx8"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggaagtcac gtgggcgagc gggctcacat gactggccgc gcgatggacc cgctgccctc
       61 gccggcagtc gctgcagcag ctgaggcgga ggctgacgag gaggcggatc cgccggcgac
      121 aggcccacaa acatcccagg tcaccgagtg gaggaacctg gaccccaggc gaatgcagat
      181 gcctcagggg aatccgttgc tgctgtccta caccctgcag gagctgctgg ccaaggacac
      241 ggtgcaggtg gagctcatcc ctgagaagaa gggcctgttc cttaagcatg tggagtacga
      301 ggtttccagc cagcgcttca agtcctccgt gtacagacgc tacaatgact tcgtggtctt
      361 ccatgaagtg ctgcttcaca agttcccgta ccgcatggta ccagcccttc cacccaagag
      421 agtgctggga gccgaccggg agttcatcga gggccgccgg agggccctga agcgcttcat
      481 caacctggtg gcccggcacc cgcccttctc tgaggatgtg ctcctgaagc tcttcctctc
      541 cttcagtggc tcagatgttc agcacaagct caaggaggcg gcccagtgcg tgggagatga
      601 gttcacgaac tgtaagctgg ctgctagggc caaggacttc ctcccagctg acatccagac
      661 tcaatttgcc atgagccggg agctgattcg aaatgtctac aacagcttct acaaacttcg
      721 agacagagcc gagcggattg cgtcccgggc cattgacaac gctgctgatc ttctcatatt
      781 cgggaaggag ctcaggcaag tgactcttgc tttgggttcc gacaccaccc ctctgccctc
      841 ctgggctgct ctgcacctca gcacgtgggg ctccctgaag caagcgctca agggcctgtc
      901 cgtggagttt gctttgcttg cagacaaagc tgcacagcag ggtaagaagg aggagaatga
      961 tgtggtggag aagctgaacc tcttcttgga tttgctgcag tcctacaaag acctgtgtga
     1021 gcggcatgag aagggcgtgc ttcacaagca tcagcgagca ctgcacaagt acggcctgat
     1081 gaagaggcag atgatgagtg cggcacatgg ccgagagccc gagtctgtgg agcagctgga
     1141 gtcacgaatt gtggagcagg agaacgtgat ccagactatg gaactccgaa actacttctc
     1201 cctgtactgt ctgcaccagg agactcagct tgtccatgtc tacctgcctc tcacctctca
     1261 catcctgggg gccttcgtga actcccagat ccaagggcac aaggagatga gcaaggtgtg
     1321 gaatgacctg aagccaaagc tgagctgcct ctttgctgga cctcacagtg tgctgacacc
     1381 accacgctcc ccgcaggagg atggcatgtg tccccactag tgacaaggcc cacgacagag
     1441 ctccctgtgg cctcactaaa acctctttgc aaacagtgtg tccctggctg attccctcta
     1501 ggcagcagcc attcccccga gctgcctgtg ggctgtgctg gccatctttg tgtctccctg
     1561 ttcctgggca ggaggtcttc gtgcccccag cccgcccctt ggcctgtttc tcaggtcggt
     1621 agtgggaaac gagggtgctt tggactggat tgtgcccgat gcccagtgct aagggccttt
     1681 tgtacccagt aagtggcatc taggggagcc taggggttaa cctagcagca aagaaatggg
     1741 aggactggcc ctgtccggtg tggcctggca aggagctggt caatctctga ggaacccaag
     1801 tacactaggc ctgcagacat tcttcgaggg gtattcaagg ccaggcgagt ggtctcacac
     1861 aggaggaggg gttgagtgtg cagtgtgtgg agcttaggag gacatattgc actccagtac
     1921 gatccttcga ggtccagggc ctgtcagggt ccaatggatg agtttcctgt gttgagtgag
     1981 gaagggttgt tggggcactg gagatgggca tccctgttgg gctgtccgtc agcaggctct
     2041 gcgtggacga gagttgtttc ctctgccggc cgctcactgg ctgtgcgctg caggcctgtg
     2101 gccctcaaag ctggcgtaga gcctgccttt tctcatgcag tctttccctg actgggctgt
     2161 aggtgcccga ctccaaactt gaggttcctc tccagggttc aaaggaatgc agagtccctg
     2221 tacccttctg ggcatcctgc tgtccgagcc tgtgctgcac cacagccatg cttggggctg
     2281 ctagaaagac ggagaagcac aagtatcacc ggatctcccg cctgcctgtc ccttttcctg
     2341 ggctgggtgg ggcccagctg tagccttaac tggacggtcc tggggccatc agagtaagag
     2401 tgaagggaag agcttttttt tttttttttt tttttttttg atgccactct gactgaagaa
     2461 gctgacagca ggggcagagg ggctctggga cactgctgtg tggactctgg gttaagggcg
     2521 tgaagaggct ggtgctgtgg gattcggctc gatgaatgaa gcactttatg gactgcggga
     2581 atcagttact gccacaccca ataaactgga agtgttt
//
