LOCUS       NP_001102749             536 aa            linear   ROD 29-MAR-2024
DEFINITION  SNW domain-containing protein 1 [Rattus norvegicus].
ACCESSION   NP_001102749 XP_001059272 XP_576077
VERSION     NP_001102749.1
DBSOURCE    REFSEQ: accession NM_001109279.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 536)
  AUTHORS   Bertram,K., Agafonov,D.E., Liu,W.T., Dybkov,O., Will,C.L.,
            Hartmuth,K., Urlaub,H., Kastner,B., Stark,H. and Luhrmann,R.
  TITLE     Cryo-EM structure of a human spliceosome activated for step 2 of
            splicing
  JOURNAL   Nature 542 (7641), 318-323 (2017)
   PUBMED   28076346
REFERENCE   2  (residues 1 to 536)
  AUTHORS   Wu,Y., Xu,F., Huang,H., Chen,L., Wen,M., Jiang,L., Lu,L., Li,L.,
            Song,D., Zeng,S., Li,L. and Li,M.
  TITLE     Up-regulation of SKIP relates to retinal ganglion cells apoptosis
            after optic nerve crush in vivo
  JOURNAL   J Mol Histol 45 (6), 715-721 (2014)
   PUBMED   25074585
REFERENCE   3  (residues 1 to 536)
  AUTHORS   Liu,X., Ni,Q., Xu,J., Sheng,C., Wang,Q., Chen,J., Yang,S. and
            Wang,H.
  TITLE     Expression and prognostic role of SKIP in human breast carcinoma
  JOURNAL   J Mol Histol 45 (2), 169-180 (2014)
   PUBMED   24150787
REFERENCE   4  (residues 1 to 536)
  AUTHORS   Chanarat,S. and Strasser,K.
  TITLE     Splicing and beyond: the many faces of the Prp19 complex
  JOURNAL   Biochim Biophys Acta 1833 (10), 2126-2134 (2013)
   PUBMED   23742842
  REMARK    Review article
REFERENCE   5  (residues 1 to 536)
  AUTHORS   Liu,G., Huang,X., Cui,X., Zhang,J., Wei,L., Ni,R. and Lu,C.
  TITLE     High SKIP expression is correlated with poor prognosis and cell
            proliferation of hepatocellular carcinoma
  JOURNAL   Med Oncol 30 (3), 537 (2013)
   PUBMED   23696020
REFERENCE   6  (residues 1 to 536)
  AUTHORS   Zhang,C., Baudino,T.A., Dowd,D.R., Tokumaru,H., Wang,W. and
            MacDonald,P.N.
  TITLE     Ternary complexes and cooperative interplay between
            NCoA-62/Ski-interacting protein and steroid receptor coactivators
            in vitamin D receptor-mediated transcription
  JOURNAL   J Biol Chem 276 (44), 40614-40620 (2001)
   PUBMED   11514567
REFERENCE   7  (residues 1 to 536)
  AUTHORS   Leong,G.M., Subramaniam,N., Figueroa,J., Flanagan,J.L.,
            Hayman,M.J., Eisman,J.A. and Kouzmenko,A.P.
  TITLE     Ski-interacting protein interacts with Smad proteins to augment
            transforming growth factor-beta-dependent transcription
  JOURNAL   J Biol Chem 276 (21), 18243-18248 (2001)
   PUBMED   11278756
REFERENCE   8  (residues 1 to 536)
  AUTHORS   Zhou,S., Fujimuro,M., Hsieh,J.J., Chen,L., Miyamoto,A.,
            Weinmaster,G. and Hayward,S.D.
  TITLE     SKIP, a CBF1-associated protein, interacts with the ankyrin repeat
            domain of NotchIC To facilitate NotchIC function
  JOURNAL   Mol Cell Biol 20 (7), 2400-2410 (2000)
   PUBMED   10713164
REFERENCE   9  (residues 1 to 536)
  AUTHORS   Baudino,T.A., Kraichely,D.M., Jefcoat,S.C. Jr., Winchester,S.K.,
            Partridge,N.C. and MacDonald,P.N.
  TITLE     Isolation and characterization of a novel coactivator protein,
            NCoA-62, involved in vitamin D-mediated transcription
  JOURNAL   J Biol Chem 273 (26), 16434-16441 (1998)
   PUBMED   9632709
REFERENCE   10 (residues 1 to 536)
  AUTHORS   Dahl,R., Wani,B. and Hayman,M.J.
  TITLE     The Ski oncoprotein interacts with Skip, the human homolog of
            Drosophila Bx42
  JOURNAL   Oncogene 16 (12), 1579-1586 (1998)
   PUBMED   9569025
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XP_576077.2, XP_001059272.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.2454985.1,
                                           SRR26360194.1668192.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     Protein         1..536
                     /product="SNW domain-containing protein 1"
                     /calculated_mol_wt=61333
     Region          178..334
                     /region_name="SKIP_SNW"
                     /note="SKIP/SNW domain; pfam02731"
                     /db_xref="CDD:460666"
     CDS             1..536
                     /gene="Snw1"
                     /gene_synonym="RGD1561926"
                     /coded_by="NM_001109279.2:59..1669"
                     /db_xref="GeneID:500695"
                     /db_xref="RGD:1561926"
ORIGIN      
        1 maltsflpap tqlsqdqlea eerarsqrsr qtslvssrre pppygyrkgw iprlledfgd
       61 ggafpeihva qypldmgrkk kmsnalaiqv dpegkikyda iarqgqskdk viyskytdlv
      121 pkevmnaddp dlqrpdeeai keitektrva leksvsqkva aampvraadk lapaqyiryt
      181 psqqgvafns gakqrvirmv emqkdpmepp rfkinkkipr gppsppapvm hspsrkmtvk
      241 eqqewkippc isnwknakgy tipldkrlaa dgrglqtvhi nenfaklaea lyiadrkare
      301 avemraqver kmaqkekekh eeklremaqk arerragikt hvekedgear erdeirhdrr
      361 kerqhdrnls raapdkrskl qrnenrdise vialgvpnpr tsnevqydqr lfnqskgmds
      421 gfaggedeiy nvydqawrgg kdmaqsiyrp sknldkdmyg ddletriktn rfvpdkefsg
      481 sdgrkrgreg pvqfeedpfg ldkfleeakq hggskrpsds srpkeheheg kkrrke
//
