LOCUS       NM_001106107            1191 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus small nuclear ribonucleoprotein U11/U12 subunit
            48 (Snrnp48), mRNA.
ACCESSION   NM_001106107 XM_001058353 XM_214453
VERSION     NM_001106107.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1191)
  AUTHORS   Will,C.L., Schneider,C., Hossbach,M., Urlaub,H., Rauhut,R.,
            Elbashir,S., Tuschl,T. and Luhrmann,R.
  TITLE     The human 18S U11/U12 snRNP contains a set of novel proteins not
            found in the U2-dependent spliceosome
  JOURNAL   RNA 10 (6), 929-941 (2004)
   PUBMED   15146077
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473977.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_214453.4, XM_001058353.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p12"
     gene            1..1191
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /note="small nuclear ribonucleoprotein U11/U12 subunit 48"
                     /db_xref="GeneID:291060"
                     /db_xref="RGD:1309020"
     exon            1..186
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..1044
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /note="small nuclear ribonucleoprotein 48k (U11/U12);
                     small nuclear ribonucleoprotein 48 (U11/U12)"
                     /codon_start=1
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /protein_id="NP_001099577.1"
                     /db_xref="GeneID:291060"
                     /db_xref="RGD:1309020"
                     /translation="MEAEPPPLEERRRLQEELSEFVESCCRTLEEVTASLGWSLDHLD
                     PGDEVTAEDEITICPYDSNHRMPKSSLPKHMESCRLRKLGYTKEEEDEMYNPTFFYEN
                     LKIPSVTLNKDSQFQIIKQARTTAGKDGDCYSQRLYSSAPVEVPLNHKRSVCDLTQAD
                     RLALYDFVIEETKKKRSAPQVIENDSDLFVDLAAKVNQDNSRKSPKSYLEILAEVRDY
                     KRRRQSYRAKNVHITKKSYTEVIRDVIKVHMEELSNHWQEEQERAEDGAEKNEERRSA
                     SVDSRQSGGSYLDVESSRHRRARSRSPHKRKRNKDKSSDSRRRKERDGERHHSHKRRK
                     QKI"
     exon            187..300
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /inference="alignment:Splign:2.1.0"
     exon            301..361
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /inference="alignment:Splign:2.1.0"
     exon            362..436
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /inference="alignment:Splign:2.1.0"
     exon            437..625
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /inference="alignment:Splign:2.1.0"
     exon            626..747
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /inference="alignment:Splign:2.1.0"
     exon            748..836
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /inference="alignment:Splign:2.1.0"
     exon            837..995
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /inference="alignment:Splign:2.1.0"
     exon            996..1191
                     /gene="Snrnp48"
                     /gene_synonym="RGD1309020"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 accacttcct gtctgaggtg agctgcgatc atggaggccg agcctcctcc cttggaagag
       61 cggcgtcggc tgcaggagga gctcagcgag ttcgtggaga gctgctgcag gacactggag
      121 gaggtgacgg cgtccctggg atggagcctg gatcacctgg accccgggga cgaggtgacg
      181 gccgaggatg aaatcaccat atgcccttat gattccaatc atcgcatgcc taaatcatca
      241 ctaccaaagc acatggaatc ttgcagactg aggaaactgg gatataccaa agaggaagag
      301 gatgaaatgt acaatcctac ttttttctat gaaaatttga agattccttc agttactttg
      361 aataaggact cacagttcca gataattaaa caagctagga ctacagctgg gaaagatggt
      421 gactgttata gccaaagact gtattcttca gcgcctgttg aagttcctct gaatcacaaa
      481 cgatctgttt gtgacctcac acaagccgat cgccttgccc tttatgattt cgtcattgag
      541 gaaacaaaga aaaagcgctc tgctcctcaa gtcatcgaaa atgacagtga cctgtttgta
      601 gatttggctg ctaaagtcaa tcaagataat agccgaaaaa gtccaaaatc ttacctggaa
      661 atcctggcag aagtgagaga ttacaaaagg agacgccagt cctacagagc taagaatgtc
      721 catataacca aaaagtcata caccgaggta attcgggatg tgataaaggt gcacatggaa
      781 gagctcagta accattggca agaagagcag gaaagggcag aagatggtgc tgagaagaat
      841 gaggaaaggc gatcggcttc ggtagattca cggcagtctg gtgggagtta tttggatgtt
      901 gaaagttcac ggcatagaag ggctcggagt aggagcccac acaaacgaaa aagaaataaa
      961 gataaaagtt ctgactcaag aagaaggaaa gaaagggatg gagaaagaca tcatagtcat
     1021 aaaagaagaa agcaaaaaat ataatcagat tgtaaatgca ttaattatgc ttatgaaata
     1081 aatatgctga tatttaatta ttatctttgc ataggagaaa atggctgtta gggtagtgta
     1141 atgcttatta ctttaataaa ttcttgaacc cacgggtcaa aattgtacct t
//
