LOCUS       NM_001108636             873 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus small nuclear ribonucleoprotein U4/U6.U5 subunit
            27 (Snrnp27), mRNA.
ACCESSION   NM_001108636 XM_001074745 XM_342717
VERSION     NM_001108636.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473957.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_342717.3, XM_001074745.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ224589.1, CF977809.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760396, SAMN06621351
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..873
                     /gene="Snrnp27"
                     /gene_synonym="RGD1310925; Ry1"
                     /note="small nuclear ribonucleoprotein U4/U6.U5 subunit
                     27"
                     /db_xref="GeneID:362392"
                     /db_xref="RGD:1310925"
     exon            1..68
                     /gene="Snrnp27"
                     /gene_synonym="RGD1310925; Ry1"
                     /inference="alignment:Splign:2.1.0"
     CDS             35..502
                     /gene="Snrnp27"
                     /gene_synonym="RGD1310925; Ry1"
                     /note="small nuclear ribonucleoprotein 27kDa (U4/U6.U5);
                     putative nucleic acid binding protein RY-1; small nuclear
                     ribonucleoprotein 27 (U4/U6.U5)"
                     /codon_start=1
                     /product="U4/U6.U5 small nuclear ribonucleoprotein 27 kDa
                     protein"
                     /protein_id="NP_001102106.1"
                     /db_xref="GeneID:362392"
                     /db_xref="RGD:1310925"
                     /translation="MGRSRSRSPRRERRRSRSTSRDRERRRRERSRSRERDRRRSRSR
                     SPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKEVKNKERQITEEDLEGKTEEEIE
                     MMKLMGFASFDSTKGKKVDGSVNAYAINVSQKRKYRQYMNRKGGFNRPLDFIA"
     exon            69..189
                     /gene="Snrnp27"
                     /gene_synonym="RGD1310925; Ry1"
                     /inference="alignment:Splign:2.1.0"
     exon            190..302
                     /gene="Snrnp27"
                     /gene_synonym="RGD1310925; Ry1"
                     /inference="alignment:Splign:2.1.0"
     exon            303..382
                     /gene="Snrnp27"
                     /gene_synonym="RGD1310925; Ry1"
                     /inference="alignment:Splign:2.1.0"
     exon            383..447
                     /gene="Snrnp27"
                     /gene_synonym="RGD1310925; Ry1"
                     /inference="alignment:Splign:2.1.0"
     exon            448..873
                     /gene="Snrnp27"
                     /gene_synonym="RGD1310925; Ry1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttccggggc ggtcggagga ggagtaggac tccgatgggt cgaagtcgta gccgctcccc
       61 gcgcagggaa cgtaggcgat cccggtccac atctcgggat cgagaaagaa gacgccgaga
      121 aaggtccagg tccagggaga gagatcgcag acggagccgc tcaagatccc cacaccgaag
      181 acgctccagg tctccaaggc gacatagatc cacatctccc tccccttctc ggctgaaaga
      241 aagaagagat gaggagaaga aagaaactaa agaagtaaag aacaaagaac gtcagattac
      301 tgaggaagat ctggagggta aaacggagga ggaaatagaa atgatgaaat taatgggatt
      361 tgcctctttt gactccacaa agggaaagaa ggtagacggc tctgtaaatg cctatgccat
      421 caacgtgtct cagaagagga aatacaggca gtacatgaat cgaaaaggcg gattcaacag
      481 acctctggat tttattgcat gagcctagag gtgttggatg gatgattttc cacccctcgt
      541 ctgggtcaga gagtatttta tattttgtat ttaatacaca tcaaaacagg atcttgattt
      601 ttccttctta taaagtaaga aagtcttatt tatgacactc accttactta cttttcaagg
      661 cagtgtccct ggggtggcca ccagcccatt tgtctgtcct tgttcctttg aaactatgtg
      721 tgctttcttc ttggatgctt gctaggtatt cttaaaaact gaaagtaaat tacatgtttc
      781 cccaataaaa caatgtttct acccatttta tatttatttt acaaacatct ttattactag
      841 attaaagagg cccccccccc tttttttttc cta
//
