LOCUS       NM_001398566             770 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus small nuclear ribonucleoprotein U11/U12 subunit
            25 (Snrnp25), mRNA.
ACCESSION   NM_001398566 XM_006246079
VERSION     NM_001398566.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Pessa,H.K., Will,C.L., Meng,X., Schneider,C., Watkins,N.J.,
            Perala,N., Nymark,M., Turunen,J.J., Luhrmann,R. and Frilander,M.J.
  TITLE     Minor spliceosome components are predominantly localized in the
            nucleus
  JOURNAL   Proc Natl Acad Sci U S A 105 (25), 8655-8660 (2008)
   PUBMED   18559850
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Will,C.L., Schneider,C., Hossbach,M., Urlaub,H., Rauhut,R.,
            Elbashir,S., Tuschl,T. and Luhrmann,R.
  TITLE     The human 18S U11/U12 snRNP contains a set of novel proteins not
            found in the U2-dependent spliceosome
  JOURNAL   RNA 10 (6), 929-941 (2004)
   PUBMED   15146077
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Dec 20, 2021 this sequence version replaced XM_006246079.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CA508096.1, CK845460.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760476,
                                           SAMEA5760494 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-221               JAXUCZ010000010.1  15928032-15928252   c
            222-312             JAXUCZ010000010.1  15927095-15927185   c
            313-418             JAXUCZ010000010.1  15926354-15926459   c
            419-493             JAXUCZ010000010.1  15925475-15925549   c
            494-770             JAXUCZ010000010.1  15924932-15925208   c
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..770
                     /gene="Snrnp25"
                     /gene_synonym="RGD1310922"
                     /note="small nuclear ribonucleoprotein U11/U12 subunit 25"
                     /db_xref="GeneID:287170"
                     /db_xref="RGD:1310922"
     exon            1..221
                     /gene="Snrnp25"
                     /gene_synonym="RGD1310922"
                     /inference="alignment:Splign:2.1.0"
     CDS             180..551
                     /gene="Snrnp25"
                     /gene_synonym="RGD1310922"
                     /note="minus -99 protein; small nuclear ribonucleoprotein
                     25 (U11/U12)"
                     /codon_start=1
                     /product="U11/U12 small nuclear ribonucleoprotein 25 kDa
                     protein"
                     /protein_id="NP_001385495.1"
                     /db_xref="GeneID:287170"
                     /db_xref="RGD:1310922"
                     /translation="MVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVM
                     PVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKK
                     LRDYGIRNRDEVSFIKKLRQK"
     exon            222..312
                     /gene="Snrnp25"
                     /gene_synonym="RGD1310922"
                     /inference="alignment:Splign:2.1.0"
     exon            313..418
                     /gene="Snrnp25"
                     /gene_synonym="RGD1310922"
                     /inference="alignment:Splign:2.1.0"
     exon            419..493
                     /gene="Snrnp25"
                     /gene_synonym="RGD1310922"
                     /inference="alignment:Splign:2.1.0"
     exon            494..770
                     /gene="Snrnp25"
                     /gene_synonym="RGD1310922"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttttgcctt cctacctaga aggcaaggcc gcctggagga gcgccggaaa agcaacagac
       61 tggcggccct ggagaatccg gagactgagg ttcgaccaga ggtgcctgag gacgacgagg
      121 atgacgagga gacattgccc cattccgagg ctgtggacgt gttccaagaa ggtctcgcta
      181 tggtggtgca agacccgctg ctctgcgacc ttccgatcca ggttacttta gaagaggtca
      241 actcccagat cgcactggaa tatggccagg cgatgactgt ccgtgtgtgc aagatggatg
      301 gagaggtaat gcctgtggtc gttgtacaga atgccacagt cctggacctg aagaaggcta
      361 tccagagata cgtgcagctc aagcaggaga gggaaggagg tgttcagcac ataagctggt
      421 cctatgtgtg gcggacgtac catctgacct cagctgggga gaagctcaca gaggacagga
      481 agaagctcag agactatggc atccggaacc gagatgaggt ttcctttatc aagaagctta
      541 ggcaaaagtg aacaccagac acatggagct gaccttcccc agcaagatgg cgccctttgc
      601 ttgtcctcag gggaaagggt gttggtgtag ctgcatccct ggagtgccca ggtggaatgt
      661 gggaaattcc tctgcccttt atttcccttt gaacttggcc cgagggtcct atgtggttgt
      721 gggcctggac tacagaataa atatgtttgc tttgtatctt gtaaaaacca
//
