LOCUS       NM_001109643            1213 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus small nuclear RNA activating complex, polypeptide
            5 (Snapc5), mRNA.
ACCESSION   NM_001109643 XM_001078552
VERSION     NM_001109643.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Vannini A.
  TITLE     A structural perspective on RNA polymerase I and RNA polymerase III
            transcription machineries
  JOURNAL   Biochim Biophys Acta 1829 (3-4), 258-264 (2013)
   PUBMED   23031840
  REMARK    Review article
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Henry RW, Mittal V, Ma B, Kobayashi R and Hernandez N.
  TITLE     SNAP19 mediates the assembly of a functional core promoter complex
            (SNAPc) shared by RNA polymerases II and III
  JOURNAL   Genes Dev 12 (17), 2664-2672 (1998)
   PUBMED   9732265
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            EV775546.1, BQ779749.1 and BQ780006.1.
            
            On Nov 25, 2010 this sequence version replaced NM_001109643.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EV775546.1, EX490690.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-723               EV775546.1         37-759
            724-1192            BQ779749.1         22-490              c
            1193-1213           BQ780006.1         1-21                c
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..1213
                     /gene="Snapc5"
                     /note="small nuclear RNA activating complex, polypeptide
                     5"
                     /db_xref="GeneID:691501"
                     /db_xref="RGD:1582813"
     exon            1..112
                     /gene="Snapc5"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..322
                     /gene="Snapc5"
                     /codon_start=1
                     /product="snRNA-activating protein complex subunit 5"
                     /protein_id="NP_001103113.1"
                     /db_xref="GeneID:691501"
                     /db_xref="RGD:1582813"
                     /translation="MLSRLQELRKEEETLLRLKAALHDQLNRLKVEELALQSMINSRG
                     RTETLPSQPAPEQLCDMSLQVDNEASINQTALKLSTRSPMEEEEEEEEEEEESDS"
     exon            113..202
                     /gene="Snapc5"
                     /inference="alignment:Splign:2.1.0"
     exon            203..1195
                     /gene="Snapc5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgctttacgg gagtggagga gcatgttgag tcggttgcag gagctccgca aggaggaaga
       61 gaccctgctg cgtctaaagg cagccctgca tgaccaactg aaccgtctca aggtcgaaga
      121 attggccctt caatcaatga taaattctcg aggacggact gagacactgc cttctcagcc
      181 tgcacctgaa cagttatgtg atatgtcgct gcaggtggac aatgaagcat caatcaatca
      241 aactgcactg aagctgagca caaggagccc aatggaggag gaggaggagg aagaagaaga
      301 ggaggaagaa tctgattcgt gaaggggaca agggctaggg ttagttatac aaactaaact
      361 aagtcttcgg tacttcatct cttcaaagtc gtcttgcagg gcctatgtga gagatatact
      421 tataaatgga agaggctcag tccataaagt atctacatgc aaatacgaag acctgagttt
      481 ggagccccag aatctgtgta aaaacctagg cagagtgtcg agtgcctgta accccagcac
      541 tggagatagg aagaccaaca gatctctgaa gcacactggc cagcctcatc tagccaaaac
      601 cagtgagttc cggtttactc agagaccccg tctggagagc agtggtggtg ctcatagagg
      661 cacacatctc aatcccagca catatgtatg gaaagggtta aataactgca aaaaaaatgg
      721 ttcttttcta ccgagatcta taaatcagtt caatctcact actagaggaa tgggggaaag
      781 tagataacat ctgatcatta ggtagaagat catagtaaga cacagtgtga gctaactttg
      841 gcatttacac acctgtaatc ccaggcttta ggatgctcta gcaagagtga ccgccatcca
      901 ctgtgaagcc aacttgaact ataaccaaac caaaacagtg ccaggtctta ccaggggtca
      961 gtcacaggga tgtgacaggg gaggcaaagg taggatatca ggtcagtgtg atagtccaca
     1021 aagcaagttc aacagccata ctccgtacag aaaactgcca gcaacctctg gccatcagca
     1081 cgcctcctca acacaccaag tacgtcatat acacccccat gctgacaact ccctacacaa
     1141 tatctacact ggttttgtgt aagatgttct tccaaagaag aaaccgagga atatcaaaaa
     1201 aaaaaaaaaa aaa
//
