LOCUS       NM_001013212            1411 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus small nuclear RNA activating complex, polypeptide
            3 (Snapc3), mRNA.
ACCESSION   NM_001013212 XM_342855
VERSION     NM_001013212.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1411)
  AUTHORS   Vannini,A.
  TITLE     A structural perspective on RNA polymerase I and RNA polymerase III
            transcription machineries
  JOURNAL   Biochim Biophys Acta 1829 (3-4), 258-264 (2013)
   PUBMED   23031840
  REMARK    Review article
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC091186.1.
            
            On Apr 20, 2005 this sequence version replaced XM_342855.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091186.1, SRR8487231.154063.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1411
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q31"
     gene            1..1411
                     /gene="Snapc3"
                     /note="small nuclear RNA activating complex, polypeptide
                     3"
                     /db_xref="GeneID:362537"
                     /db_xref="RGD:1305172"
     exon            1..318
                     /gene="Snapc3"
                     /inference="alignment:Splign:2.1.0"
     CDS             17..1240
                     /gene="Snapc3"
                     /note="SNAPc subunit 3"
                     /codon_start=1
                     /product="snRNA-activating protein complex subunit 3"
                     /protein_id="NP_001013230.1"
                     /db_xref="GeneID:362537"
                     /db_xref="RGD:1305172"
                     /translation="MAEDPQGGGAGGPQHPVPSGSHSSFPEYELPELHTRVFHVGAFG
                     ELWRGRLGAQDLSLNEPQAAAQPTDGEASNNGFEDAAVAEDLGCSLEAAAELRVVCGL
                     DKLRCLGEDEDPEVIPENTDLVTLCVRKGLLDYREENITIDRACRQETFAYEMESHAL
                     GKKPENPADMIEEGESILSVNILYPVIFNKHREHKPYQTVLVLGSQKLTELRDSICCV
                     SDLQIGGEFSNAPDQAPEHISKDLYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSES
                     HDRGYGKFQTARMEDFTFNDLNIKLGFPYLYCHQGDCEHVVVITDIRLVHHDDCLDRT
                     LYPLLTKKHWLWTRKCFVCKMYTARWVTNNDTFAPEDPCFFCDVCFRMLHYDSEGNKL
                     GEFLAYPYVDPGTFN"
     exon            319..396
                     /gene="Snapc3"
                     /inference="alignment:Splign:2.1.0"
     exon            397..481
                     /gene="Snapc3"
                     /inference="alignment:Splign:2.1.0"
     exon            482..586
                     /gene="Snapc3"
                     /inference="alignment:Splign:2.1.0"
     exon            587..736
                     /gene="Snapc3"
                     /inference="alignment:Splign:2.1.0"
     exon            737..819
                     /gene="Snapc3"
                     /inference="alignment:Splign:2.1.0"
     exon            820..984
                     /gene="Snapc3"
                     /inference="alignment:Splign:2.1.0"
     exon            985..1092
                     /gene="Snapc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1093..1388
                     /gene="Snapc3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agggatcctg gctgacatgg cggaggaccc gcagggcggc ggtgcgggtg gcccacagca
       61 cccagtcccc agtgggagcc acagcagctt tccagagtac gagcttcccg agttgcacac
      121 gcgcgtgttc cacgtcggcg cttttgggga gttgtggcgc ggtcgactag gagcccagga
      181 tttgtcgctg aacgaaccgc aggcagccgc gcagccgacg gacggagagg catccaacaa
      241 cggctttgag gatgctgcgg tagctgagga tctgggttgc agtctggagg cggcggcaga
      301 gctgagggtc gtgtgcggcc ttgataaatt gagatgcctc ggtgaagatg aagacccaga
      361 agtcatccca gagaacaccg acctagtgac tttatgtgtg aggaaggggc tcttagacta
      421 tcgggaagaa aacatcacga tagatcgtgc ctgtagacaa gaaacgtttg cttatgaaat
      481 ggaatctcat gcactaggaa aaaaacctga aaatccagca gacatgattg aagaaggaga
      541 gtctatccta tctgtgaaca tcttatatcc ggttatattt aataagcaca gagaacacaa
      601 gccataccag acagtgttgg tattgggcag tcagaagctc acggaactga gagactcaat
      661 ttgctgtgtc agtgacctcc agattggtgg agaattcagc aatgccccag accaggcccc
      721 cgaacacatc agcaaagacc tatacaagtc agctttcttt tattttgaag gaacgtttta
      781 caatgacaaa agatacccgg aatgcagaga cttgagcaga actataatag agtggtcaga
      841 gtcccatgac cgaggatatg gaaaatttca gaccgctaga atggaagact tcacattcaa
      901 tgacttgaat attaaacttg gctttcctta cttatactgt caccagggag attgtgagca
      961 tgttgttgtc atcacagaca taaggcttgt gcatcatgac gactgcttgg atagaacact
     1021 ttatcccctt cttaccaaga agcattggct atggactaga aaatgttttg tctgtaagat
     1081 gtatacagct agatgggtga caaacaatga cacctttgca ccagaggatc catgtttctt
     1141 ttgtgatgtt tgcttcagaa tgctccacta tgattccgaa ggcaacaaac taggggaatt
     1201 ccttgcttat ccttatgttg acccaggaac ctttaattaa taccactaaa atatatatac
     1261 atatttttcc tactgcagtt tagttaaaat tacattattt attacaaggg gttatggctt
     1321 tttacttcag ttgtttgtta ctgagatgta gaaatgtttt gaatatataa acattgtcag
     1381 aaacacaaaa aaaaaaaaaa aaaaaaaaaa a
//
