LOCUS       NM_001108033            1692 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus small nuclear RNA activating complex, polypeptide
            1 (Snapc1), mRNA.
ACCESSION   NM_001108033 XM_001080731 XM_234299
VERSION     NM_001108033.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Vannini A.
  TITLE     A structural perspective on RNA polymerase I and RNA polymerase III
            transcription machineries
  JOURNAL   Biochim Biophys Acta 1829 (3-4), 258-264 (2013)
   PUBMED   23031840
  REMARK    Review article
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473947.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001080731.1, XM_234299.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161969.1, SRR8487231.56572.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132264
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q24"
     gene            1..1692
                     /gene="Snapc1"
                     /note="small nuclear RNA activating complex, polypeptide
                     1"
                     /db_xref="GeneID:314228"
                     /db_xref="RGD:1304671"
     exon            1..189
                     /gene="Snapc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             5..1177
                     /gene="Snapc1"
                     /codon_start=1
                     /product="snRNA-activating protein complex subunit 1"
                     /protein_id="NP_001101503.1"
                     /db_xref="GeneID:314228"
                     /db_xref="RGD:1304671"
                     /translation="MEAPAGSSTRPMGAGTLEGVGIPPGLQTDCETLLSRFQEMDSVR
                     FEDFAELWRSMKFATIFCGKMRNLKKNMFTREALALAWCYFLPPYTFQIRVGALYLLY
                     GLYNTQLCQPKQKIRVALKDWDEVIKFQQDLISAQHFDAAFVFRKLRLDRAFHFTAMP
                     KLLSCRMKKKAQQAEVTQKFKDPNDRVMKLITSDVLEEMLNVHDHYQNMKHAISADKS
                     TPDRALSLVKEDFFDNIKNIVLEHQDWHKERKNPSLKPKLKDGEEDGEGPSEEPERCE
                     RAVSLAKIKAKAFSAVAQVSKSRRHRQSKLDSSDSDSGSGQVQGKATKRKRTREPAEP
                     AGRKQRPSRSKGDVPNERKEEKSLRLSMPVITEEEEESSDGLSKAEFTAPKRKRKH"
     exon            190..349
                     /gene="Snapc1"
                     /inference="alignment:Splign:2.1.0"
     exon            350..490
                     /gene="Snapc1"
                     /inference="alignment:Splign:2.1.0"
     exon            491..595
                     /gene="Snapc1"
                     /inference="alignment:Splign:2.1.0"
     exon            596..754
                     /gene="Snapc1"
                     /inference="alignment:Splign:2.1.0"
     exon            755..823
                     /gene="Snapc1"
                     /inference="alignment:Splign:2.1.0"
     exon            824..886
                     /gene="Snapc1"
                     /inference="alignment:Splign:2.1.0"
     exon            887..1040
                     /gene="Snapc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1041..1142
                     /gene="Snapc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1143..1692
                     /gene="Snapc1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagcatggag gctcctgcgg gctccagcac ccggcccatg ggcgcgggaa cccttgaagg
       61 cgtgggaatt cctccgggcc tgcagaccga ctgtgagacg ctgctcagcc gcttccaaga
      121 gatggacagc gtgcgcttcg aggacttcgc ggagctctgg cgcagcatga agttcgcgac
      181 catcttctgc gggaaaatga gaaacctaaa aaagaacatg tttacaagag aagctctggc
      241 tttggcttgg tgctacttct tgcctccgta cacgttccag atcagagttg gcgccttgta
      301 tcttctgtac gggctgtaca acacacagct atgccagccg aaacaaaaga tcagagttgc
      361 cttgaaggac tgggatgaag ttattaaatt ccagcaggac ttgataagcg cccagcattt
      421 cgatgcagct tttgtgttca ggaagcttcg gctcgacagg gccttccact tcacagccat
      481 gcccaagctg ctctcatgta gaatgaagaa aaaagctcaa caagctgaag tgacacaaaa
      541 atttaaggac cctaatgacc gtgtgatgaa acttattact tctgacgtgt tagaggagat
      601 gctgaatgtt cacgaccatt atcaaaatat gaagcatgcc atttcggcag acaagtccac
      661 gccagaccga gctctcagtc tagtcaagga ggattttttt gacaacatta agaacatagt
      721 tttggagcat caggattggc acaaagaaag gaagaatccc tccttaaaac cgaaacttaa
      781 agatggagag gaggatggcg aaggcccctc agaggagccg gagagatgtg aaagagcagt
      841 gtctttggca aaaataaaag caaaagcatt ttcagctgtt gcccaggtgt ccaagtccag
      901 gaggcatcgc cagtccaagc ttgactcttc tgactcggat tctgggtctg gacaagtaca
      961 aggcaaagca actaagagaa agagaaccag agagccagca gagccagcag gaaggaagca
     1021 gcggccttcc aggagcaaag gtgatgttcc aaatgaacgc aaggaagaga agtctttacg
     1081 cctgagtatg cctgtaatta cagaggagga ggaggagagc tcggatggcc tcagcaaagc
     1141 agagttcact gcaccgaaga ggaagagaaa acactgaacc aggagactgg tggagtttaa
     1201 atttcaagct ttccaacaga agaaatgata ttttatgttc taagcaggaa gcagccagtg
     1261 aagactaaat ctgagagaga gcaagatcat ttctgtgaaa tgggagagcc tgtcataggc
     1321 caagagttgg agtaaaggtt tactctgaag cttagtttta acatttttgt taaagttgta
     1381 atttgaacaa attacattat aatttgtaac aaaacaaatt gtaaatgtgt taaatttgtt
     1441 aaaatagtta aagctttgta tgagtggagt taaagtttct attaccttgt atatttgtgg
     1501 gttaatactc tttcctgaaa gtttttgtgc tgtcacctta atgcagtact gtaatgttta
     1561 cgattctgtt tttaatacag tatatataaa tgactcatac ctgtcgccta agaatagatt
     1621 tggctgtggt ttttgttgaa ggttttgagt gttatggtta aatgcaataa attttttgcc
     1681 cccttgtttt at
//
