LOCUS       XM_039082110            4250 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus synaptosome associated protein 91
            (Snap91), transcript variant X8, mRNA.
ACCESSION   XM_039082110
VERSION     XM_039082110.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4250
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4250
                     /gene="Snap91"
                     /gene_synonym="Ap180"
                     /note="synaptosome associated protein 91; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 37 ESTs, 16 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     66 samples with support for all annotated introns"
                     /db_xref="GeneID:65178"
                     /db_xref="RGD:69276"
     CDS             208..2850
                     /gene="Snap91"
                     /gene_synonym="Ap180"
                     /codon_start=1
                     /product="clathrin coat assembly protein AP180 isoform X7"
                     /protein_id="XP_038938038.1"
                     /db_xref="GeneID:65178"
                     /db_xref="RGD:69276"
                     /translation="MSGQTLTDRIAAAQYSVTGSAVARAVCKATTHEVMGPKKKHLDY
                     LIQATNETNVNIPQMADTLFERATNSSWVVVFKALVTTHHLMVHGNERFIQYLASRNT
                     LFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSYRQMAFDFARVKKGADGVMRTMV
                     PEKLLKSMPILQGQIDALLEFDVHPNELTNGVINAAFMLLFKDLIKLFACYNDGVINL
                     LEKFFEMKKGQCKDALEIYKRFLTRMTRVSEFLKVAEQVGIDKGDIPDLTQAPSSLME
                     TLEQHLNTLEGKKPGNNEGSGAPSPLSKSSPATTVTSPNSTPAKTIDTSPPVDIFATA
                     SAAAPVSSAKPSSDLLDLQPDFSGAAAGAAAPVPPPTGGATAWGDLLGEDSLAALSSV
                     PSEAPISDPFAPEPSPPTTTTEPASASASATTAVTAATTEVDLFGDAFAASPGEAPAA
                     SEGATAPATPAPVAAALDACSGNDPFAPSEGSAEAAPELDLFAMKPPETSAPVVTPTA
                     STAPPVPATAPSPAPTAVAATAAATTTTTAAAAATTTATTSAAAAATAAAPPALDIFG
                     DLFDSAPEVAAASKPDVAPSIDLFGTVDAFAAPSPASTASPAKAESSGVIDLFGDAFG
                     SSASETQPAPQAVSSSSASADLLAGFGGSFMAPSTTPVTPAQNNLLQPNFEAAFGTTP
                     STSSSSSFDPSVFDGLGDLLMPTMAPSGQPAPVSMVPPSPAMSASKGLGSDLDSSLAS
                     LVGNLGISGTTSKKGDLQWNAGEKKLTGGANWQPKVTPATWSAGVPPQGTVPPTSSVP
                     PGAGAPSVGQPGAGYGMPPAGTGMTMMPQQPVMFAQPMMRPPFGAAAVPGTQLSPSPT
                     PATQSPKKPPAKDPLADLNIKDFL"
ORIGIN      
        1 tagagagacg cggcggcgct ggcggaggcg gcggcgggcg gggaccgcgg ggaccgcgga
       61 gctgagacag gggccgggcc ggagctgtag gcatcgcggc ccggggactc cagggcggcg
      121 cgcgccttca cccagctacc ccgcgcggcg tccgggctgc ggtgctcctg gggcgggaag
      181 aggaggcggt agacgcgacc ggtgaagatg tcgggccaaa cgctcacgga tcggatcgct
      241 gccgctcagt acagcgtgac tggctctgct gtagcaagag ccgtctgcaa agccaccact
      301 catgaggtga tgggccccaa gaagaagcac ctggactatt tgatccaggc taccaacgag
      361 accaatgtca atattcctca gatggcggat accctctttg agcgggcgac aaacagcagc
      421 tgggtggtgg tatttaaagc tttagtgacc acacaccacc tcatggtgca cggaaatgag
      481 agatttattc agtatttggc ctctagaaat acgctgttca acctgagcaa ctttctagat
      541 aagagtggat cccacggtta tgatatgtcc acgttcatac gacgttatag tagatacttg
      601 aatgagaagg ctttctccta cagacagatg gcattcgact ttgccagagt gaagaaaggg
      661 gccgacggtg taatgaggac aatggttcct gaaaagttgc tgaagagcat gccaatcctg
      721 caggggcaga tcgacgcgct gctggagttc gatgtgcatc caaatgagct aacaaatggt
      781 gtcataaatg ctgcatttat gcttcttttc aaagatctta tcaaactgtt tgcttgctac
      841 aatgacggcg tcattaactt acttgaaaaa ttttttgaga tgaagaaagg tcaatgcaaa
      901 gacgcactag aaatttacaa acgatttcta actagaatga ctcgagtctc cgaattcctc
      961 aaggtcgcgg agcaagttgg tattgataaa ggtgacattc ccgacctcac acaggctccc
     1021 agcagtctta tggagaccct tgaacaacat ctaaatacct tagaaggaaa gaaacctgga
     1081 aacaatgaag gatctggtgc tccctctcca ttaagtaagt cttctccagc cacaactgtt
     1141 acatctccta attctacacc agctaaaact atcgacacgt ccccaccagt cgacatcttt
     1201 gcaacagcat ccgcggctgc cccagtcagc tctgctaagc catcaagcga tctccttgat
     1261 cttcagccag acttctccgg agcagctgcg ggggcagcag cgcctgtacc accacctact
     1321 gggggagcca ctgcgtgggg agaccttttg ggagaggatt ccttggctgc actttcctct
     1381 gttccctctg aagcaccgat ttctgaccca tttgcaccag aaccttcccc tcctactaca
     1441 accactgaac ctgcttcagc ttctgcctca gccaccacag ctgtgacagc tgccactaca
     1501 gaagtggatc tctttggaga tgcctttgca gcttctcctg gggaggcccc tgcagcatcc
     1561 gaaggggcca cggcaccagc taccccggcc ccggtggctg cagctcttga tgcatgctca
     1621 ggaaatgacc cttttgcccc atctgaaggt agcgcagagg ctgcacctga gctcgacctc
     1681 tttgcaatga agccacctga gaccagcgct cctgtagtta cccctacagc tagcacagcc
     1741 cctccagttc ccgcaactgc tccttctcct gctcccacgg ctgtggcagc cactgctgcc
     1801 gccaccacca ccaccaccgc cgccgctgca gctacgacca ctgccaccac ctctgctgct
     1861 gctgctgcca ccgctgctgc tcctcctgct ctagatatct ttggtgattt gtttgattct
     1921 gctcctgaag ttgctgcggc atctaagccg gacgtggctc ctagcataga cctgtttggc
     1981 acagtggacg cgtttgcagc gccgtcgcct gcatccactg cctctcctgc aaaggcggag
     2041 tcctcgggtg tcatagacct ttttggggat gcgtttggaa gtagtgcttc tgaaacccag
     2101 ccagcaccac aggctgtttc tagttcatca gcatcggcag atctactggc tggatttggg
     2161 ggttctttca tggccccttc tacaacacct gtgactccag ctcagaataa cctgctgcaa
     2221 cccaattttg aggcagcttt tggaacaacg ccttcgactt caagcagcag ctccttcgac
     2281 ccatcagtgt ttgatggttt aggcgatctt ctgatgccaa ccatggcacc gtccgggcag
     2341 cctgcccctg tctcaatggt cccacccagt cctgcaatgt cagccagcaa aggccttgga
     2401 agtgaccttg actcgtctct ggccagctta gtaggcaatc ttgggatttc tggtaccaca
     2461 tcaaaaaagg gagatctcca gtggaatgct ggggagaaga agttgaccgg tggagccaac
     2521 tggcaaccaa aagtcactcc ggccacatgg tcagcaggcg ttccaccgca aggcactgtt
     2581 cctccaacca gctcagtccc tccgggtgcc ggcgccccgt ctgttgggca acctggagca
     2641 ggatatggaa tgcctcctgc ggggacaggc atgaccatga tgcctcagca gccagtcatg
     2701 tttgcacagc ccatgatgag gccacccttt ggagctgcag ctgtgcccgg cacacagctt
     2761 tctccaagcc ctacacctgc cactcagagt cccaagaaac ctccagccaa ggacccatta
     2821 gcggatctta acatcaagga tttcttgtaa acaatttaag ctgcaatttt tgtgactgaa
     2881 taggaaaact aagctgagtt tggaaacgtc agtttcaaag tgagccacca gtaccaaacc
     2941 cagtgctgac tcgtaacttc ctctcccaaa cgcacagccc agctgtgact gtgaacatta
     3001 ggaatgtgta ctttagctgt taaccctact ctccagctca tagcgtattg ggttctttgt
     3061 gtgttgtacg acgtaaacaa tgagtgaatg gttccaatgc ctttagtgct tttctggacg
     3121 ttgcctgtgg acggatgatg acgcagctgt catgtggtga gccatttgga aagatgtgtc
     3181 tgtgttttcg aaggtttcaa tgtatatata acttggacga ccgctcaagt cctcccatga
     3241 actctcttct cttctgtacc tctgttccaa gcgtaacgtg atactatcag ctagtgagga
     3301 aaacaccctt aactatacag aaactttttc cgtgtggagt acatttttcc aatcacagaa
     3361 acttcaactt gtcgtgggaa atgtttattt ttgtgcgctg tatatgttaa gaaattttat
     3421 tttaaaaaaa aatgaagttt aatgtccata ataaaacttc tccttatgaa gctaccttat
     3481 caagagtgag aaaaaccgta tgagaagtcc atatttatca ctgctatatt aagatatata
     3541 ttttaattat atttgcaggg tttgcatcta aattgaccta tttattcatt cttgatcaaa
     3601 ggcactgaaa agtggagcct gtttctattg tgtctgtgaa aaatgcaatt agagatgtgc
     3661 tgtttattgt gactatgaac gtgccccaag agacatctgt aacttaaaga gaactgcaaa
     3721 tattttttat ttcagtgtgg atttacgtac atctgttcag ttagtatttc tttgtgtatt
     3781 ctataaacta gcgttcctcc ctccttcgac tgaactcaaa gtgacttcta ttgtaccttg
     3841 tgataggatt gcaaccaatc cagcgaattg tatcttttaa tgtacatact ggattctttg
     3901 atttttagtt tgttgtcata ctgtctgtgc cgatggcttg gctgaagatt ttgatgcgta
     3961 cacaaggtca ctgttgatca gtgttgttta gtggcttggc agctctttgt aaaagcatat
     4021 tgggttggaa aggcatttgc ctatttttca aattatttaa tagatgtatg gtacccttta
     4081 aagtggttgt atctgaactt attgtgggga taaacataca ctgtaacggg ggaaaattac
     4141 ctaaaaccaa tttcaaaatg gcttttcttt gtattttggt ttaaaaaccc agtgcatgtc
     4201 tgccctctga gatgcaataa acaccttgaa caaagaaaat gcaaacaaga
//
