LOCUS       XM_006256945             864 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus small muscle protein, X-linked (Smpx),
            transcript variant X2, mRNA.
ACCESSION   XM_006256945
VERSION     XM_006256945.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006256945.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006256945.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..864
                     /gene="Smpx"
                     /note="small muscle protein, X-linked; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     6 samples with support for all annotated introns"
                     /db_xref="GeneID:84416"
                     /db_xref="RGD:69233"
     CDS             166..423
                     /gene="Smpx"
                     /codon_start=1
                     /product="small muscular protein isoform X1"
                     /protein_id="XP_006257007.1"
                     /db_xref="GeneID:84416"
                     /db_xref="RGD:69233"
                     /translation="MSKQPISNVRSIQANINIPMGAFRPGAGQPPRRKESTPGTAEGA
                     PATPEEKKPVPGMKKFPGPVVNLSEIQNVKSELKYVPKGEQ"
ORIGIN      
        1 ggcttgttgg ggtggttagg tgggacgcct aggaagatca aacgatccgg ttcttcaaag
       61 agtccgcaaa cctcttcaaa gtttgccagg agaagagata ttcacacagc tgagagggta
      121 ctccaaaagc tgagccaccg tcttcaggta taagacctct tgaacatgtc gaagcagcca
      181 atttccaacg tcagatccat tcaggccaat attaatattc caatgggagc ctttcgtccg
      241 ggagctgggc agcctcccag aaggaaagag agtacccctg gaactgcgga gggagcacct
      301 gctactcccg aggaaaagaa gccagttcct ggaatgaaga aattcccagg acccgtcgtc
      361 aacctgtctg agatccaaaa cgttaaaagt gaactaaaat acgtccccaa aggtgaacag
      421 tagttcaaag gggtcagaag gcttgacgtg ctttctcaat ggaaaaaaca atgggttgaa
      481 ataaacaact tcatgagaat tttatatatt tgtatgatga tcacaaactt cctgaatgcc
      541 caagactcta gcaaaaaata tcctgtttgt acatttatat ttcttccttc tacttggctg
      601 catttctcac tttagctaca tttttggcac cttgcagagc aaatgagcac atgaatttac
      661 cacctgggga gtgtggtttt gaggagagat gtgattttta tggagggggg tacagcaatg
      721 tgcatgcagt gattttgata ttaagtactt ttaagttact tcccacagtc ttttggtcaa
      781 tatttgaaat gtcttcttca ccttttaaat gatctcaatt aactttttat gagttgaaat
      841 aaatatttga gtaaatgtaa cata
//
