LOCUS       NM_001100944            4356 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus sperm motility kinase (Smok), mRNA.
ACCESSION   NM_001100944 XM_001070118
VERSION     NM_001100944.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4356)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC128761.1.
            
            On Aug 12, 2007 this sequence version replaced XM_001070118.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC128761.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate          :: translation inferred
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4356
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.3"
     gene            1..4356
                     /gene="Smok"
                     /gene_synonym="RGD1562638; RGD1564276"
                     /note="sperm motility kinase"
                     /db_xref="GeneID:290818"
                     /db_xref="RGD:1562638"
     exon            1..338
                     /gene="Smok"
                     /gene_synonym="RGD1562638; RGD1564276"
                     /inference="alignment:Splign:2.1.0"
     exon            339..2355
                     /gene="Smok"
                     /gene_synonym="RGD1562638; RGD1564276"
                     /inference="alignment:Splign:2.1.0"
     CDS             361..2325
                     /gene="Smok"
                     /gene_synonym="RGD1562638; RGD1564276"
                     /EC_number="2.7.11.1"
                     /codon_start=1
                     /product="sperm motility kinase"
                     /protein_id="NP_001094414.1"
                     /db_xref="GeneID:290818"
                     /db_xref="RGD:1562638"
                     /translation="MKRWQVCQDLRSSPFQEDALTDHYRILASLGQGGFGEVKLASHL
                     LTQTKVAIKVLPKSNKNLLLKSEIEIMKSLDHPHIIKLLHIIDTNENIFIVLEHAVGG
                     ELLTRIEDFGYLPEEECNRLFRQMVLALQYCHQRGIIHRDIKPENILLDHKGNVKLSD
                     FGLSTKIVMGQKLTTLCGTLPYCAPELFNLNGYDGQAIDVWSLGVVLYYMATGCLPFQ
                     GFTYQAIKQKILSGRYSVNFRLSPDLWDVIAKLLTVNPRERPRVHEILRFNWLKNENE
                     VSPSSLGGNTDSHPDPTILVMMGDMGYEQGQIRESLRERKFDQVMATYLMLREKACSE
                     DKSIKTPHPTQCAQTLKSTGSTTEKQTTLRRGSSLPTLTTFYLPSKLESLNKEKRTTM
                     RHTMPPNLNCFNKSESLNKGRRTIVSHTISPTLNCFNKSESLNKGKRTIVRHTMPPKK
                     TSPVRRICPRLHKSFGMGSASEDSSKRNSSDPSLTIFSSQSFMSAFKYGSTYSKRKAF
                     LQCILHYHASQEEDQYKTTIIPSGKLNTTVPPNSLQEDQPTGHLHNVLTAGAVDNRNL
                     QEKSPPFSTTATKGEGPAIKERESIPSSPRAPREQFRGRSQTPPRAPFRRRVWKTLKS
                     GFLKGLGSLCCCLPIQKKVHPASNRVPPMK"
     exon            2356..2530
                     /gene="Smok"
                     /gene_synonym="RGD1562638; RGD1564276"
                     /inference="alignment:Splign:2.1.0"
     exon            2531..2882
                     /gene="Smok"
                     /gene_synonym="RGD1562638; RGD1564276"
                     /inference="alignment:Splign:2.1.0"
     exon            2883..3468
                     /gene="Smok"
                     /gene_synonym="RGD1562638; RGD1564276"
                     /inference="alignment:Splign:2.1.0"
     exon            3469..3703
                     /gene="Smok"
                     /gene_synonym="RGD1562638; RGD1564276"
                     /inference="alignment:Splign:2.1.0"
     exon            3704..3812
                     /gene="Smok"
                     /gene_synonym="RGD1562638; RGD1564276"
                     /inference="alignment:Splign:2.1.0"
     exon            3813..4332
                     /gene="Smok"
                     /gene_synonym="RGD1562638; RGD1564276"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggtgatttgt gaaacttgga ctttggtaaa aattttggac tcggatactg gtgaacgttt
       61 tggactcgga ttctggcaaa ggtttggact cggatactgg tgaacgtttt ggactcggat
      121 tctggcaaag gtttggactc ggatactggt gaaggttttg gattcggatt ctggcaaagg
      181 tttggactcg gatactggtg aacattttgg gcttggattc tggcaacggt ttggactcgg
      241 atactgctga acgtttttga ctcggattct ggcaaaggtt tggactcgga tactggtgaa
      301 ttttggactc ggattctggt tacatttgga tttcccagtt ggtgtggaca atcgacgaag
      361 atgaagaggt ggcaagtgtg tcaggacctc aggtccagcc cctttcagga agatgcctta
      421 acagatcatt acagaatact agcaagcctt ggccagggag gatttgggga ggtcaaacta
      481 gcttcccatc tcctcaccca gacaaaggta gctataaaag ttctccccaa aagcaataaa
      541 aacctcctgc tcaaatccga aattgaaatc atgaaatccc tcgatcaccc ccatatcatt
      601 aaacttttac acataattga caccaacgaa aacattttca tcgtcctgga gcacgcggtg
      661 ggaggagagc tgctgaccag aattgaggac tttggatact tacccgagga ggagtgcaac
      721 agactgttta gacagatggt tttagcactc cagtactgtc accagagagg gatcatacat
      781 agggatataa aaccagaaaa cattttattg gaccacaaag gaaacgtaaa actgagtgat
      841 tttggattga gcaccaagat agtcatgggt cagaagttaa caacattgtg tgggaccctc
      901 ccttactgtg ctccagaact gtttaatctt aatggatatg atggccaggc aatcgacgtc
      961 tggagcttgg gagttgttct ctactatatg gctacagggt gtctcccttt ccagggattt
     1021 acctatcaag caataaagca gaaaatcttg tcaggaaggt actcagtgaa cttccggttg
     1081 tcaccagacc tctgggatgt gatagccaaa ttgctaactg tcaaccctag agaaaggcca
     1141 agagtccatg aaattttaag atttaactgg cttaagaatg agaatgaagt ttctcccagt
     1201 tcattaggag gaaacactga cagccaccct gaccccacta tactggtcat gatgggcgac
     1261 atggggtacg agcaaggtca aataagggaa agcttgaggg agcgaaagtt tgaccaggtg
     1321 atggctactt acttaatgct cagggagaag gcatgctcag aagacaaatc catcaaaaca
     1381 cctcatccca cgcagtgtgc tcaaactttg aaaagcacag ggtcaaccac ggaaaagcag
     1441 acaactctga ggaggggatc tagtctgcct acccttacaa ccttctattt acccagcaaa
     1501 ttagaaagtc ttaacaagga aaaaagaact acaatgaggc acactatgcc acctaacttg
     1561 aactgcttca acaaatcaga aagtcttaac aagggaagaa gaactatagt gagtcacact
     1621 atttcaccca ccttgaactg cttcaacaaa tcagaaagtc ttaacaaggg aaaaagaact
     1681 atagtgaggc acactatgcc acccaagaag acaagtccag ttcgaagaat ctgcccacgg
     1741 cttcacaagt ctttcggcat ggggagtgcc tcggaagata gctctaaaag aaattcttca
     1801 gatccatcac tgacaatctt ctcctctcaa tcattcatga gtgcattcaa atatggctct
     1861 acctattcaa agaggaaggc gttcttacag tgtatcttac attatcatgc ctcccaggaa
     1921 gaagaccaat ataagaccac catcataccg agtggaaagc ttaacacaac tgttccacca
     1981 aactcccttc aggaggacca gcccacagga cacctccata atgtgcttac agctggagca
     2041 gtggacaaca ggaacttaca agagaaatca ccaccattct ctaccacggc gaccaagggt
     2101 gagggtcctg ctataaaaga aagagagtcc atcccatcct ccccacgtgc tcctcgggaa
     2161 caattccgtg gcaggagtca gactccaccc agggccccct ttagaaggcg tgtctggaag
     2221 accttgaaga gtggctttct aaaaggactg gggagtttat gttgctgtct accgatccaa
     2281 aagaaggtac accccgccag caacagagtc ccacctatga agtaaaagga gccatggagg
     2341 cagtcgtggt aacagagcac ttggaggcac agagctccct gcaagatacc agagcacgaa
     2401 gatcaatttg ctgagcgcac agacaggcac agaagagagc caggaagttc ccatggttgg
     2461 gtgaaagtca gaattcatct acatcacagt ctgaaactaa tggacaactc tttctgtctg
     2521 ctgattaata gttggttttc atgatggctg ctggttccct aattgtgcct gccaactgag
     2581 gtgcttcata gggcttagaa atgctgaaaa caaggttacc atggcatgca tgtcatcatc
     2641 aagaacacaa gccttacagg actttccagg catggtgaga tcatcagctg ccggtctcca
     2701 gatggacctg tgagacctta gaagaaacaa tgggcagtgg aagcagtgaa ggacctcaga
     2761 gtgcctgacc tgtatgtgca acataactgt tgctgaccag attggagcca gaaacagagc
     2821 gaagatggtg cacggatggt ccatctagca ctcataatgg aaggaagagt ttacactaac
     2881 aggaaaaatg tgatgtcaaa cacaccacag tgcacactat ggcagggcat ctcagatcag
     2941 gcacggtgaa gcccaccatg tgtgtttgag tggagacaag ggcaagtctg gaacattgga
     3001 tacttgaagt ctgagcggga gctgcttctg agcatgacca tggataagca cgtggggatg
     3061 gagaaacaac taaggccctc tgttctgatg acaggggact tcctttgcag ggcttatggt
     3121 ctcctgccac cccccacacc tgaggaaact cagggaatta aatggtcaga tctgtactcc
     3181 tccttactcc catactcacc tatgccctgc ctttcttatt ttcaacagca tcgaataaga
     3241 tcaaagctgt tttctctctg atgccctgta gggatgttgc tgtcactgca tttgtcttcg
     3301 ggcatcaagt caagtgcctt tatggggtgt ttgccctatg accctgtgct tcagctacca
     3361 aaggactctt gatctcacac tcaacaaggg acagagcctg agaccagcta catctgcatg
     3421 gtgcttaggg cagcagatcc tcctgaagcc ctatgcactg gatggaaagt ctctttgatg
     3481 taagaggtcc ctgatgatgt gcagagaagt agcaaaagag aaggaagtcg catcgtcacc
     3541 cacctgcact ggaagcgtca tgggaagtaa actgtgtcct gctctcagga acacccagca
     3601 gttttccctg actgtttgtt gtgcaagaag agtagatcag tcatggtgga gagcgtcctc
     3661 actgggaaca gttcctctct ccaccaggag tcatgtgatc cgtctatcag aggactcctg
     3721 ggaagacacg caacaaggga cagagcctga gaccagctac atcttcgtgg tgcagagggc
     3781 aggagaagtt cctggagctc tacacagtgg aagtctcctt catggaagag gcccctgaga
     3841 ttagcagaaa agtagcacca gagatacaag tcgcatcatc agccacctgg actgggagca
     3901 acatgagaag taacatgcat tctgatctca ggaacaccca gcagttttcc ctgaccgttt
     3961 gttgtgcaag aagagtagat gagtcagtgt ggagaacttc ctcactgcga acagttcctc
     4021 tctccaacag gagtcaagca atcagtgtaa ggtgcatcgc aagtgccctc catccaccaa
     4081 ctccactcct gtgtaaatgc ggcaaggaga gtcagttggt gtcactggta actcagtcac
     4141 ctaggcactg acaccacttc cccagaaaaa aagtctcaat gcaaggtcaa gacagcagaa
     4201 gtatatgacg acagatattg tacaggggga ggggaaaacc cattttttgg ctccattcca
     4261 aagcagtggt atcaaccaat acctacagaa atgaaccatg aagtcggccc ataataaaaa
     4321 cggtcctctg taaaaaaaaa aaaaaaaaaa aaaaaa
//
