LOCUS       NM_001135252            1306 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus small integral membrane protein 7 (Smim7), mRNA.
ACCESSION   NM_001135252 XM_001067168 XM_001067702
VERSION     NM_001135252.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB570183.1 and BC158706.1.
            
            On or before Sep 28, 2008 this sequence version replaced
            XM_001067702.1, XM_001067168.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158706.1, EV776533.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-19                CB570183.1         6-24
            20-1306             BC158706.1         1-1287
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..1306
                     /gene="Smim7"
                     /note="small integral membrane protein 7"
                     /db_xref="GeneID:688495"
                     /db_xref="RGD:1588793"
     exon            1..58
                     /gene="Smim7"
                     /inference="alignment:Splign:2.1.0"
     CDS             33..260
                     /gene="Smim7"
                     /note="UPF0608 protein C19orf42 homolog"
                     /codon_start=1
                     /product="small integral membrane protein 7 precursor"
                     /protein_id="NP_001128724.1"
                     /db_xref="GeneID:688495"
                     /db_xref="RGD:1588793"
                     /translation="MIGDILLFGTLLMNAGAVLNFKLKKKDTQGFGEESREPSTGDNI
                     REFLLSLRYFRIFIALWNVFMMLCMIVLFGS"
     exon            59..100
                     /gene="Smim7"
                     /inference="alignment:Splign:2.1.0"
     exon            101..153
                     /gene="Smim7"
                     /inference="alignment:Splign:2.1.0"
     exon            154..244
                     /gene="Smim7"
                     /inference="alignment:Splign:2.1.0"
     exon            245..1295
                     /gene="Smim7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttccggttt gaccgatgcc ttggctgtaa ggatgatcgg agacatactg ctgttcggga
       61 cgctactgat gaacgccggg gctgtgctca actttaaact gaaaaagaag gacacgcaag
      121 gctttgggga ggaatcgagg gaacctagca caggcgacaa catccgagag tttttactga
      181 gcctgaggta tttccggatc ttcattgcgc tgtggaatgt gttcatgatg ctctgcatga
      241 tcgtactgtt cggctcttga gccctgcatg gaacccagag cttacctgct ggacatcgag
      301 gctccatttc tgatgacttc aagaatgctc actggaaaac cagggacctt cccagaaggt
      361 tccagctcat ttgggtggag aacgtccatc tcccaggcac ttgacccttt gcagccacag
      421 ttccacctgt cttttgcagt ttcaggaaga tctgtaagcc acagtgacag agtcaggctt
      481 tgttaggaga aagacctaga tctttccctt gttctgccat tctatcttct cctggcccag
      541 cctctccaga aacctgacct aggctatttc ttggttgact tgttagtgat cgttttgctt
      601 tgatttgggt ttgagggttt tggttttttt tttttttttt ttattgatac ggtttctctg
      661 cagccctggc tgtcctggag ctcgggcacc agactggcct caaacttaca gagctccacc
      721 tgtctctgcc tcccaagtgc tgggattaaa ggtgtgtgcc accactcctt agttgatgtg
      781 aatcaggcac cggcttgcag ggctagccat gaaagtctag cagcctcttt tgcactacaa
      841 ggtccatgct gatggaccca acagtctggg gctagtgagg tcttacgtcc aaacacttcc
      901 ttcttactcc gtgacagggt ttacctggat cagcgaaagt ctgctccagc actcgaagga
      961 gcaggtccac cgcccttggg acaccagcct ctttagacgc taagcgttag ccataacatg
     1021 cttcttcaga agaggcctgt agaagaggtg ctgtggtgat gttagcagac acctctctgt
     1081 gctttcaagc cgcttgtcaa taaagtgtct ttgggggctg gagagatggc tcagcggtca
     1141 agagcactga ctgctcttcc agaggtcctg agttcaaatc ccagcaccac atggtggctc
     1201 acaaccatct gtaatgggct ctgataccct cttctggtgt gtctgaagac agctacagtg
     1261 tacttatata taataaatct ttaaaaaaaa aaaaaaaaaa aaaaaa
//
