LOCUS       NM_001384852             231 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus small integral membrane protein 47 (Smim47),
            mRNA.
ACCESSION   NM_001384852
VERSION     NM_001384852.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CR458148.1, SRR26643293.2856.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on single protein-coding
                                                transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-67                JAXUCZ010000001.1  103881242-103881308
            68-127              JAXUCZ010000001.1  103881386-103881445
            128-231             JAXUCZ010000001.1  103881564-103881667
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..231
                     /gene="Smim47"
                     /note="small integral membrane protein 47"
                     /db_xref="GeneID:103691109"
                     /db_xref="RGD:9421087"
     exon            1..67
                     /gene="Smim47"
                     /inference="alignment:Splign:2.1.0"
     CDS             53..139
                     /gene="Smim47"
                     /codon_start=1
                     /product="small integral membrane protein 47"
                     /protein_id="NP_001371781.1"
                     /db_xref="GeneID:103691109"
                     /db_xref="RGD:9421087"
                     /translation="MNLQENVTLAMAVLTILASIYFFNKAQQ"
     exon            68..127
                     /gene="Smim47"
                     /inference="alignment:Splign:2.1.0"
     exon            128..231
                     /gene="Smim47"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcagaggtct gagggaggca ggtcaagtgc tgtgtggcta ggacccatgg ctatgaactt
       61 gcaggaaaat gtgaccttgg ccatggccgt gttaaccatc ctagcctcca tctacttctt
      121 caacaaggct cagcagtaag aaggcatggc tccccagtcc accagcttgg cccccgcctg
      181 ctctgccatt gctctggcct ctaagatcca ataaatgtta acagcaccag a
//
