LOCUS       NM_001276483             981 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus small integral membrane protein 12 (Smim12),
            mRNA.
ACCESSION   NM_001276483 XM_001064606 XM_002726626
VERSION     NM_001276483.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 981)
  AUTHORS   Ahmed,F., Torrado,M., Zinovieva,R.D., Senatorov,V.V., Wistow,G. and
            Tomarev,S.I.
  TITLE     Gene expression profile of the rat eye iridocorneal angle: NEIBank
            expressed sequence tag analysis
  JOURNAL   Invest Ophthalmol Vis Sci 45 (9), 3081-3090 (2004)
   PUBMED   15326124
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On or before Feb 17, 2013 this sequence version replaced
            XM_001064606.3, XM_002726626.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.20901.1,
                                           SRR26643299.24333.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-79                JAXUCZ010000005.1  144853936-144854014
            80-981              JAXUCZ010000005.1  144856845-144857746
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..981
                     /gene="Smim12"
                     /note="small integral membrane protein 12"
                     /db_xref="GeneID:685634"
                     /db_xref="RGD:1591379"
     exon            1..79
                     /gene="Smim12"
                     /inference="alignment:Splign:2.1.0"
     exon            80..981
                     /gene="Smim12"
                     /inference="alignment:Splign:2.1.0"
     CDS             85..363
                     /gene="Smim12"
                     /codon_start=1
                     /product="small integral membrane protein 12"
                     /protein_id="NP_001263412.1"
                     /db_xref="GeneID:685634"
                     /db_xref="RGD:1591379"
                     /translation="MWPVLWTVVRTYAPYVTFPVAFVVGAVGYHLEWFIRGKDPQPVE
                     EEKSILERREDRKLDEMLGKDHTQVVSLKDKLEFAPKAVLNRNRPEKN"
ORIGIN      
        1 gggaaccccg acgttcgtgt tgctcccggc tagcgggcgc agcgcggggc cggtccgggt
       61 tgttcgggct gggccgcaga tgtcatgtgg cctgtgcttt ggaccgtggt gcgtacctat
      121 gccccctatg tcaccttccc tgtggccttt gtggtcgggg ctgtgggcta ccacctggaa
      181 tggttcatca ggggaaagga tccccagcct gtggaggagg agaagagtat cttggagcgc
      241 cgagaggacc gaaagctgga tgagatgcta ggcaaggacc acactcaggt ggtgagcctt
      301 aaggacaagc tagaatttgc ccctaaggca gtcctgaaca gaaaccgccc agagaagaat
      361 tgatggaggg cccaggtccc tgtggtgcac agggagatgc catgtcctgc ctccacacca
      421 cccagcttca gaacatgcat ctgatttgct ttgctgctca ctccggcccc tgtgcactca
      481 cagccacacc tgtactgcct ggtcctttat ggctgtacac ctgccgtagt aggggccagc
      541 aaagaggaag acgcatctgc tcagcgggct ctctccatgg ctgggcaggc tgctgatctt
      601 tcctgggagc actgcaggga ggagccctgg ggcatgaacc ctggtctcag gctccctggg
      661 gaagggcttg gcctcagctg ggaatgattg gggtttatca ttgccattag gagggacacc
      721 tccaggtcaa ctagtctttg cactggaaaa atttcagaaa tgcccctggc tcccttgatg
      781 agcttctctt atttttctgt gcacatcctt ccctgtgttg gctcaggcat gggattctca
      841 ggggaaggaa ggcatgtttc tactgtgggg agcgaggttg gttacctcag ggccgatggg
      901 gcttagcctg gaagcaatca ctgtcttcca cccttcctca ctgtggtgag gactcaatta
      961 aagtggcacc tggcacacgt t
//
