LOCUS       NM_001131000             499 bp    mRNA    linear   ROD 12-JUN-2023
DEFINITION  Rattus norvegicus small integral membrane protein 11 (Smim11),
            mRNA.
ACCESSION   NM_001131000
VERSION     NM_001131000.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC166910.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166910.1, CB566819.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-499               BC166910.1         2-500
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q11"
     gene            1..499
                     /gene="Smim11"
                     /gene_synonym="Fam165b; Smim11a"
                     /note="small integral membrane protein 11"
                     /db_xref="GeneID:100174909"
                     /db_xref="RGD:2299853"
     exon            1..28
                     /gene="Smim11"
                     /gene_synonym="Fam165b; Smim11a"
                     /inference="alignment:Splign:2.1.0"
     exon            29..153
                     /gene="Smim11"
                     /gene_synonym="Fam165b; Smim11a"
                     /inference="alignment:Splign:2.1.0"
     CDS             142..309
                     /gene="Smim11"
                     /gene_synonym="Fam165b; Smim11a"
                     /note="family with sequence similarity 165, member B;
                     small integral membrane protein 11A"
                     /codon_start=1
                     /product="small integral membrane protein 11"
                     /protein_id="NP_001124472.1"
                     /db_xref="GeneID:100174909"
                     /db_xref="RGD:2299853"
                     /translation="MNWKVLEHVPLLLYILAAKTLILCLAFAGVKMYQRRSLEGKLQA
                     EKKRQSERKEN"
     exon            154..322
                     /gene="Smim11"
                     /gene_synonym="Fam165b; Smim11a"
                     /inference="alignment:Splign:2.1.0"
     exon            323..499
                     /gene="Smim11"
                     /gene_synonym="Fam165b; Smim11a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaacgaggag gccccgccgc attgaatttc tctctctccc caggtcagaa cttccagctc
       61 cttggtcctg acctcgcagc tgcctctcat gctgatgtgt accggttacg tcaatcacaa
      121 gtgaaccaca gctggcccgc catgaactgg aaggttctcg aacacgtgcc tctgctgctg
      181 tatatcttgg cagcaaagac cctgatcctt tgcctggcct ttgcgggagt gaaaatgtac
      241 cagaggagaa gcttggaagg aaaactgcaa gctgagaaga agcggcaatc agagaggaaa
      301 gagaactgaa gagaccttag agattttcct attcaaatgt cagcttgggt ggactccagc
      361 agcgaagaga gaagaaagac ttaacagagg aggacacagt tctggcctag acctttaact
      421 taaatgatta acagcgtgaa tttttataag tttttagaag aaccagtatt ttgtttactg
      481 aaataaaatg cattattct
//
