LOCUS       NP_001102977             111 aa            linear   ROD 31-MAR-2024
DEFINITION  SRA stem-loop-interacting RNA-binding protein, mitochondrial
            [Rattus norvegicus].
ACCESSION   NP_001102977 XP_001068036
VERSION     NP_001102977.1
DBSOURCE    REFSEQ: accession NM_001109507.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Colley,S.M., Wintle,L., Searles,R., Russell,V., Firman,R.C.,
            Smith,S., Deboer,K., Merriner,D.J., Genevieve,B., Bentel,J.M.,
            Stuckey,B.G., Phillips,M.R., Simmons,L.W., de Kretser,D.M.,
            O'Bryan,M.K. and Leedman,P.J.
  TITLE     Loss of the nuclear receptor corepressor SLIRP compromises male
            fertility
  JOURNAL   PLoS One 8 (8), e70700 (2013)
   PUBMED   23976951
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 111)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (residues 1 to 111)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (residues 1 to 111)
  AUTHORS   Ruzzenente,B., Metodiev,M.D., Wredenberg,A., Bratic,A., Park,C.B.,
            Camara,Y., Milenkovic,D., Zickermann,V., Wibom,R., Hultenby,K.,
            Erdjument-Bromage,H., Tempst,P., Brandt,U., Stewart,J.B.,
            Gustafsson,C.M. and Larsson,N.G.
  TITLE     LRPPRC is necessary for polyadenylation and coordination of
            translation of mitochondrial mRNAs
  JOURNAL   EMBO J 31 (2), 443-456 (2012)
   PUBMED   22045337
REFERENCE   5  (residues 1 to 111)
  AUTHORS   Zhao,X., Leon,I.R., Bak,S., Mogensen,M., Wrzesinski,K., Hojlund,K.
            and Jensen,O.N.
  TITLE     Phosphoproteome analysis of functional mitochondria isolated from
            resting human muscle reveals extensive phosphorylation of inner
            membrane protein complexes and enzymes
  JOURNAL   Mol Cell Proteomics 10 (1), M110.000299 (2011)
   PUBMED   20833797
REFERENCE   6  (residues 1 to 111)
  AUTHORS   Hatchell,E.C., Colley,S.M., Beveridge,D.J., Epis,M.R., Stuart,L.M.,
            Giles,K.M., Redfern,A.D., Miles,L.E., Barker,A., MacDonald,L.M.,
            Arthur,P.G., Lui,J.C., Golding,J.L., McCulloch,R.K., Metcalf,C.B.,
            Wilce,J.A., Wilce,M.C., Lanz,R.B., O'Malley,B.W. and Leedman,P.J.
  TITLE     SLIRP, a small SRA binding protein, is a nuclear receptor
            corepressor
  JOURNAL   Mol Cell 22 (5), 657-668 (2006)
   PUBMED   16762838
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Oct 4, 2007 this sequence version replaced XP_001068036.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643295.26203.1,
                                           SRR26643285.25530.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     Protein         1..111
                     /product="SRA stem-loop-interacting RNA-binding protein,
                     mitochondrial"
                     /calculated_mol_wt=12445
     Region          21..92
                     /region_name="RRM_SLIRP"
                     /note="RNA recognition motif (RRM) found in SRA
                     stem-loop-interacting RNA-binding protein (SLIRP) and
                     similar proteins; cd12242"
                     /db_xref="CDD:409688"
     CDS             1..111
                     /gene="Slirp"
                     /coded_by="NM_001109507.2:99..434"
                     /db_xref="GeneID:688717"
                     /db_xref="RGD:1585290"
ORIGIN      
        1 maasavkglt alrsrtgrpi afirkipwta asselrehfa qfghvrrctv pfdketgfhr
       61 gmgwvqfssq eelqnalqee hhiidgveih vqpqkpkvlh gaqtsdeekd f
//
