LOCUS       XM_220775               6079 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus schlafen family member 5 (Slfn5),
            mRNA.
ACCESSION   XM_220775
VERSION     XM_220775.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_220775.9.
            
            On Jan 21, 2021 this sequence version replaced XM_220775.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6079
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6079
                     /gene="Slfn5"
                     /note="schlafen family member 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 48 ESTs, 5 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     42 samples with support for all annotated introns"
                     /db_xref="GeneID:303377"
                     /db_xref="RGD:1312025"
     CDS             382..3036
                     /gene="Slfn5"
                     /codon_start=1
                     /product="schlafen family member 5"
                     /protein_id="XP_220775.3"
                     /db_xref="GeneID:303377"
                     /db_xref="RGD:1312025"
                     /translation="MNFLTNLELNFAECILDGGRATMGVRQRVEMDATQRMRQNETIS
                     QAVCALLNSGGGVIRVEIENRDYNFERDGVGLDLPPLFRNHLDQMMHGRFFLIYVSSW
                     TVEASGVRLATLCSNLYRRCGNFTEVMDPPEALTFLRNVQVVRGLGDSDFLSLQEAPV
                     DDAQMVLASDVFNSQQLQYLEKLNFTESLHVEFQMFSADLAQGIRERLPKCVSALANS
                     EGGYVFFGVHETGQVIGCEKEKLNCSNLLTTIDACIRRMPVYHFCAHNHKVQYTHRFL
                     EVYDKKALHGYVCAIKVERFCCVAFAKAPDSWEVKDSVMKPLTAKDWTSWMTETNPEL
                     FSFPQMISRMNMLNTTPRSRTVFSHKYLKCVEDLQKDYFSVLPNRITYTPESVYKDLF
                     SDYRGLRNLISAEMRCFSQGILIFSHSWAVDLGLQRERDVICDALLISPNNVPILYTI
                     CNKWDLRNRQYSMGVAYTLKQRLVNMGGYTGRLGIIPLVFPLGADQRVRDDLEMPVYP
                     ESYNFITMEQVEALLQSLVIVLFGFRPLLNEELNSESETVALLTEQQHELLSMNLTKH
                     RELFVHGLPGSGKTTLALMTLEKIKNVFNCQAEDILYICENQSLKKFVSRKIVCQAVT
                     RKAFMKNTYDNVQHIIVDEAQNFRTEEGNWYAKAKGIVQRGRDGPGVLYIFLDYFQIN
                     HLGCSGLPELQNQKPMLKLTRMLRSGDRIANYLQDIMHLIQNNPPPNVPRDALRMGEE
                     PEGRANDTGSLEITNGLNLEQMANYVAEKCQGLWRTGYYPEDVAVLFTNVRDIEKCRE
                     RLLLAMRRRTMSQLGEESSLLVQVREGLDSPGNHIVLDSVQRFSGMERSIVFGIIPEN
                     FETDISYNVLLCLASRARTHLYIVRVRL"
ORIGIN      
        1 ctttaatttt ctgtttcaat gcctccaccg acccaccatc ctgaagatct ctgtccttgg
       61 taagcttgac gtgaggattc cagcagaccg aggagactga gggacttcca ggcaccgagg
      121 agagggaccc tggagcagta gagtccgaga aaggccagtt agccaaggtt attggcagca
      181 ctggggtttc ctggtccaag agaacaggac tgttttctgc acaagcgccc cgccccgtca
      241 ctgcgctcag ctgatataag gacaagagcc cgcaggagag aggtctccat tctggactcg
      301 gggacaccat ctctgactcc aggaggcaag cgtgctgcgg aggacagacg ccggaaaagg
      361 tttcagtcaa aggccgagaa gatgaatttc ctgacaaatt tggaactgaa ctttgcagag
      421 tgtatattag atggaggaag agccaccatg ggggttaggc aaagggtgga aatggatgcc
      481 acacaaagga tgagacagaa tgaaaccatc tcccaagcag tgtgcgctct gctcaactcc
      541 ggcggcggag tgatcagggt tgagattgag aacagagact ataattttga gagggatgga
      601 gtaggcctgg acctgccacc attgttccga aaccatttag accagatgat gcatggaaga
      661 ttctttttaa tctatgtgag ttcgtggacc gtggaagcct caggagtgcg gctcgctacc
      721 ctgtgttcca atttgtaccg cagatgtgga aactttactg aggtcatgga ccctccagaa
      781 gctctgacat tcctcagaaa tgtccaggtt gttaggggtc ttggtgattc cgacttttta
      841 agtctacagg aagctcctgt tgatgatgct cagatggtct tagcttctga tgtgtttaat
      901 agccagcagc tccagtacct ggaaaaactc aactttacag agtccctaca cgttgaattt
      961 caaatgttct cggcagacct tgcacagggc attcgagaga gactccccaa gtgtgtttct
     1021 gcgttggcca attctgaagg gggctatgtg ttttttggtg ttcatgaaac cggtcaagtc
     1081 attggatgtg aaaaggaaaa actaaattgt tccaacttgt tgactactat tgatgcctgt
     1141 atcaggagga tgcctgtcta tcacttctgt gcacataacc acaaagtgca atatacccac
     1201 agattccttg aggtgtacga taagaaggcc ctccatgggt atgtctgtgc aatcaaggta
     1261 gaacgattct gctgtgtagc gtttgcgaaa gcgcctgatt cctgggaggt aaaggacagt
     1321 gttatgaagc cgctgactgc aaaggactgg acctcttgga tgacagaaac caacccagag
     1381 cttttcagtt tccctcagat gatctccagg atgaatatgt taaacaccac accccgcagc
     1441 aggactgtgt tcagtcataa atatttgaaa tgtgtggagg acctacagaa ggattacttt
     1501 tcagtgttac ctaacaggat tacatatact ccagagagcg tctacaagga cctcttctca
     1561 gactacagag gactaagaaa cttaataagt gcggaaatgc gctgtttctc tcaagggata
     1621 ttgatcttct cccacagctg ggctgtggac ctaggtcttc agagggagcg agatgtcatc
     1681 tgtgatgctc ttctaatttc cccaaacaat gtcccaatcc tgtacaccat ttgcaacaag
     1741 tgggatctga ggaacaggca gtattccatg ggcgtcgcct ataccctgaa gcagaggctg
     1801 gtgaacatgg gtggctacac tggaagatta ggcatcattc ccttggtctt cccactgggt
     1861 gctgaccaaa gagtaaggga tgatttagaa atgccggttt accctgaatc ctacaacttc
     1921 ataaccatgg agcaggtgga agctctgttg cagtctcttg tgatcgtctt gttcgggttc
     1981 agacccttgt taaatgagga gttaaactct gagtctgaga ctgtggccct actcacagag
     2041 caacagcatg agttgctttc aatgaatctg actaagcaca gagagctgtt tgttcatggt
     2101 ttacctgggt cagggaagac cactctagct ctcatgaccc tggagaagat caagaacgtg
     2161 ttcaactgtc aagctgaaga tattctttac atctgcgaga accagtcttt gaagaaattt
     2221 gtgagcagga aaatcgtttg tcaggcagtg acacggaaag ccttcatgaa aaacacctat
     2281 gacaacgtgc aacatatcat cgtggacgaa gctcagaatt tccgaaccga agaagggaac
     2341 tggtacgcca aggcgaaagg catcgttcag agagggagag atggcccagg agtcctctac
     2401 atttttctgg attactttca gatcaatcac ttgggctgca gtggcctccc tgagctccaa
     2461 aaccagaagc caatgttgaa gctcaccagg atgctccgca gtggagacag gatagccaac
     2521 taccttcaag atataatgca tctaatccaa aataatcctc ccccgaatgt ccccagagac
     2581 gccctgagga tgggtgaaga acccgaaggc cgtgcaaatg acacaggcag tttagagata
     2641 actaatggcc tcaatttgga gcagatggca aactatgtag ccgagaaatg ccagggtctc
     2701 tggaggactg gctattaccc cgaggatgtt gctgttcttt tcactaacgt cagagatata
     2761 gaaaaatgta gagaaaggct tctgctagcg atgaggagga ggaccatgtc tcagcttggt
     2821 gaggagtcca gtttactagt gcaggtcagg gaggggttgg atagtccggg gaatcacatt
     2881 gtgttggata gtgtccagcg attttcaggc atggaaagaa gtatagtgtt tgggattatt
     2941 ccagaaaact ttgagacaga catttcctac aatgttctgc tctgcctggc ttccagggca
     3001 agaacccacc tgtatattgt aagggttaga ctttgatagg aggataccag tttttagtta
     3061 gctggggttg gtctctagat ctcttttgaa actctttgat ataaacattt aagcaccaaa
     3121 acatttcatg tatagtcacc cactcagggt aagcaaatat gggtatgggg gattcagaca
     3181 gtagtcagag atataacagc aattagttgg ccctgagtct ctctctctct ctctctctct
     3241 ctctctctct ctctctctct ctctctctct ctctctctct ctctctgtgt gtgtgtgtgt
     3301 gtgtgtgtgt gtgtgtgtgt gtgtatcatg aaggattggt tgtttgaggt agggaggaaa
     3361 gagccaatta tgagatgact gctatactat acgttctagt ggactcagat attttccttg
     3421 tttttaacac agaaatgctt gatcctggta tgtggagaga gcatgaaggg tggagggtgt
     3481 gtccatcttt agcaggacat ggtttgaaat gtaagttcac aaattgcaag ttataatttc
     3541 agggtgagac cagttgaact tgtgttattt cccattttgc ctttcactgg cactactatt
     3601 tttgatcttt gcttcctaca tgacttgttc attcagaatc tctctccttt gactctgctt
     3661 taatattaat gcccgtggag actcagggat gctacagcca aagtgccaaa gtgtgggttc
     3721 agtggtttgg aagaatggac agactctaag ttagcagcac ttcacactta atttagtaac
     3781 cgtagcacgc aaatgtaagt tgaatatctc tgttctctca gcactcggta gttcgaccag
     3841 cctttcaaag gctgtcgctg aaaaatactc atttgtcatt tactttaggt ttcttcaaac
     3901 tcagtattta gagccaaaca gagcagactt ttctgggaga cacaaacaaa aaacccagag
     3961 ttcatttgct attaaaaaga gcaaaagcgg gctggagaga tggctcagcg gttaagagca
     4021 ctgactgctc ttccagaggt cctgagttca attcccagca accacatggt ggctcacaat
     4081 catctgtaat gggatgctct cttctgaagt gtctgaagag aactacagta tactaacata
     4141 taaataaaac aaagaaatct ttaaaaaaaa gagcaaaagc gaattatgaa aactcaagga
     4201 aaatgaatat acatgggaag tatgacagaa gttgagtaac ttggaggaaa aaacccatac
     4261 attctaatgg gtggatccga gccattcatg tttgtcagag tgtgtgtaag gtgagtaggg
     4321 gtgtagataa tagctaggaa aaaaagacaa agaagctggg ggaaagggag ggctggggag
     4381 taggggcatc aggacacatg tggtatgaag cagaaagggg gccggggggg gggaggtgga
     4441 agtggaggcg cagcgatagg ctctgggagg ggagcggcac agatactaga aaaattctgg
     4501 aaaaaataaa atgtgaagat agaatcagtt tgctttaggc agcttgttac attcttagaa
     4561 aatttacaac aaagaaattt acttctagcc aggcagtgat ggcgcatgcc tttaactcca
     4621 acactcagaa ggcagaggca ggtggacctc tgaggccagc ctggtctaca gagtgggttc
     4681 taggacatcc aaagctacac agaaaaaccc tgactcaaaa agcaaagcca aaaaagaaaa
     4741 aaaaaaaaag gacaaagcca ggtagtggtg gtgcacagct ttttaatctc agcactgtgg
     4801 agacagagac aggaggatct ctgagtttga gactagcctg gtctacagag tgagtgccag
     4861 gttagccaga aaggtcaaga aacaatatgc ttgggaaatg ctggcagcaa atgtcatcaa
     4921 tatttttttt ttctctaaag tttctattca tggtagttta atcccattgc tcaggaggcg
     4981 gaggcaggaa gatctccgtg agcttgagtc cagcctggtc tacagagtga gttccaggcc
     5041 aaccagggct acatagtgag actttgtctc aaaccctttt tctatataaa agaaaaattt
     5101 ccaagattaa aagaaaactg gaggaaggac ttgacgggaa gcgtgcagaa ggcgttaaat
     5161 agctcctaca catggagggg acattactat ggtcgcatga gtgtcccata accagggtgt
     5221 gtgatgactg acatgccatt tggagagaaa gctgccaatg gccgtgactt gctcgaatgc
     5281 tgacaaactt ttaccttgag attcatttct aaggaactta ctctgcacac acagcttgca
     5341 cacatgtaaa aaagcttctg gacagatgca tagaagtctg cttctagggt tggggattta
     5401 gctcagtggt agagcgcttg cctaggaagc gtaaggccct ggggttcggt ccctagctcc
     5461 gaaaaaaaaa aaaagaacca aaaaaagaag tctgcttcta gtagcagaaa gcacagtagc
     5521 agtaaacatc gatacagagc agttgaaggg agtaagttac gggctagcac aatgcaccat
     5581 cacaccatga agccatacaa aagcgagctc tccatcgtat ttatgcattc tgtattgcga
     5641 acaaagtcca tcctgtgcct ctagagttgg cacacatgct cgcggatgca ttcgggattt
     5701 ttgaaagtaa accttaaaaa ctggcagcag tatttgactc tggaaagggg aaatcggcga
     5761 cgagggagaa caacagcttt tgctctttgc gactctaggt tctctaccat gtggtacttg
     5821 acggagtttt gctttgcatg tgtttttcac ttatgaattt gtaaatgact ttctcagttc
     5881 ttatcaacct gtatcctgga taaacatttc ataatcatag tggatattga tagtggatag
     5941 tgaatggggg aattcgaaaa ctatacaaca taatagattt ttttagtacc taacatttag
     6001 aagtgtggac tcactgtcat atttgattca agcttgtttt ttttttaata ataaaagcca
     6061 taaaatattg gaattaaaa
//
