LOCUS       XM_017597675            4259 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus schlafen family member 3 (Slfn3),
            transcript variant X4, mRNA.
ACCESSION   XM_017597675
VERSION     XM_017597675.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017597675.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017597675.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4259
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4259
                     /gene="Slfn3"
                     /note="schlafen family member 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 9 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 14 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:501712"
                     /db_xref="RGD:1564411"
     CDS             2110..3813
                     /gene="Slfn3"
                     /codon_start=1
                     /product="schlafen family member 12-like"
                     /protein_id="XP_017453164.1"
                     /db_xref="GeneID:501712"
                     /db_xref="RGD:1564411"
                     /translation="MRAGNTPELVEDVNPQPVTEPSVQLMGPGNILQGGRRAKPGSLK
                     DSQRGFHLGNRDSDWKMSITVDQDTDYVELVLSIGEITLGEKNRNSMKDSQRRRKETK
                     NFLQAVCTLLNSGGGVVKARIKNQDYSFTRDGIGQDLVNSLPGILKLPHEYLDYMQDQ
                     DYFFIFVKAWKLNQKGPGITTLKTNLYSRSISSSIELKAADTVKFLKSRKCSKGRSDS
                     RLSSPGTIDCNEVLNECLNLFNRDCFAYKETFCFTKATHAEVKLTPKKKILEILPQTV
                     SSFANADGGYLFTGLDGKTQEIIGFEAEKSDLVHLESEIEKCIRQLPVTHFCEEREKI
                     KYTCKFMEVHKPGAACSYVCALRVERFCCAVFAAEPESWHVEDSCVKRFTAEDWVKRQ
                     MDGPAFISGKVISSPEALCGKLFSPQEAHEQLLLAQLGSLCEETLVITKRWALDLPLQ
                     DKQGVILDVLQISQDSLLTLHGFVLGGEDLEDDSTFLRELGAELKGYYKQTALTLKQT
                     LINLSGCTGKVGITTKITYLCHNKAVSLYDSSSKIHYPTKYYLTAKTVTDLEKALRSL
                     M"
ORIGIN      
        1 gccaggggag aacaccccaa gagggctgcc cagctttgtc cagggcagct gagatagaat
       61 atagaattca gtatgtaatg atcggaatta tgggtggtca gtgggttagc cacgtggagg
      121 tcaggacata gctcagccat tgagctgatg aaggcatatc aaaatataaa ggctgtgtgt
      181 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgc gcgcgcgcgc gcgggcacgc ctgcctgtac
      241 ttgcatgtgt gtgtgtgtgt ttcacttggg aacccagcac atcccggccc atagggagga
      301 gcatgccatt gtagaggatt atttaactgt ttactgctac aagttttagc ctaaactgtt
      361 tatgtttctt tttttttttt aaatgtcaca tttctagaac aaggaagtga ctctacgtgg
      421 ccagaggaca gattcctgtg aatctgtgtt cactgtggca ctggagactc atagtagctg
      481 agaactgggt gggcagtgcc atccatcaac agaggaaggg acaaagaaat gcagacaatg
      541 ggggttccac ctgcagtact gagagggaaa tgacatcttt gcatgaagtg actgtgacac
      601 aactagtgaa aagagcaggg ctcgacgtga cacataggag gcattttctc taatttgcaa
      661 gatctatatg actatatctg gaaggaagac gggagctgag ggaaggagga gaagaatcgt
      721 gaggaggaga gaaggaagga tggggaggga gagtatgtgg gcatgtgcag atggtgaagg
      781 gaggaaggaa atattccaga aagtctgttt gtacagaaag ctcttcccat gaagccagct
      841 tctttgctac aggatggggg ccgggggttt cctctcatga ttccaggagg agaaagaact
      901 aggttgattc tcttgcctct gcagcttttt acttaccttt agctcaaata ctggccgagt
      961 ggcatacact ggggtggtgt atattgccac tgcctagaag agtaacctct gggagagcac
     1021 agatctgctt atgttccatt tacattccac atttggtgac agccactctt cactgaggac
     1081 acaattgcct gagacaaatg aatgatggaa acttgtttcg tagacttaat ggaacttttc
     1141 acacacacac acacacacac acacacacac acacacacac acacacacac acaattatag
     1201 aaaagtatgt agaagtagaa catgtttcac cccaggatca gaaagaaaaa cagcatgtgc
     1261 tctctcgcac acagatctta ctacgactcc tactgctaca ctcttatagt aaggtgaagg
     1321 agcccacagg aagtggggga aaggcttcga ggggagaagc gggagagtca gagccaaagt
     1381 tatattctaa gtattaactt ctgtgccgaa gaggtctatg agacaaaact gactttaatc
     1441 tggaagcccc ttccccaaag acaaaatctt aaaatgcagg aggctactgt tttttcattt
     1501 tcctaaacat gtttgtttga cccaagggca ccggatgtgc ttgatcacat atagactgga
     1561 ggtatggcgg aggcagaacc tttgctgtga tgagtgcttg cctctgattg gacttaggca
     1621 ggagatgtga aggcaggaaa taagtcaaga tacatgcttg ccccttcctg aatctggggg
     1681 gggggcgggg ggaggtacga aggtaggaag tacattaaga tacgtgcttg cctctaattg
     1741 gccctgatgg caaatccagt ggccttatgg gtttgccttt atatgactac acaaactgcc
     1801 gcctccgcca ttttctggga accccagagt ggttctgggc agaatccttc atcctgactg
     1861 gatgaaaaga gaaaaaaaaa gaacgaaacc atgagtgccc ctcgttttcg tcaccacata
     1921 catgaagaaa agaaataaaa agcgaggaag aggacaggtt cagggggaag ctttaagacc
     1981 tcgctaccgg ttagcacatc agaggcagag cccggaagtc tacctgtcct gaggacttca
     2041 tgctgttgtg gagtttccct tcaagaatct gaagttagaa agagttgaga agagacggtg
     2101 tttgaagaaa tgagggctgg aaacacccca gagttggtgg aagatgtgaa tccacagcca
     2161 gtcacagagc cctctgttca actcatgggt ccagggaata ttcttcaggg aggacggcgt
     2221 gccaagccag gaagtttgaa agattcacag agaggatttc atctgggaaa cagagacagt
     2281 gactggaaaa tgagcatcac tgttgatcaa gacacagact atgttgaact ggttctgtct
     2341 ataggagaaa tcacacttgg agagaaaaat aggaattcaa tgaaagatag tcaacggaga
     2401 agaaaggaga ccaaaaattt cttacaggct gtgtgtacgc tgctgaattc cggagggggc
     2461 gtggtcaagg ctcgcattaa aaatcaagac tacagcttca cccgagatgg aataggacag
     2521 gatttggtaa attccttacc tggtatcctg aaacttcctc atgaatatct ggattacatg
     2581 caggaccaag actatttttt catttttgtg aaagcatgga agctgaatca gaaaggtcca
     2641 gggatcacca ccttgaaaac caacctgtac agcagaagca tctcatcctc aattgaactg
     2701 aaagcagctg atacagtgaa gttcctcaaa tccaggaaat gttctaaagg gagatcagat
     2761 tccagactga gttcacctgg aacaattgac tgtaatgaag tactaaatga atgtcttaac
     2821 ttatttaaca gagactgttt tgcctataaa gagacattct gtttcactaa agccacacat
     2881 gctgaagtaa aactgactcc taagaaaaag attttagaga tcctccctca aactgtttct
     2941 tcatttgcaa acgcggatgg gggatatttg ttcactggtt tggatggcaa aacccaggaa
     3001 attattggct ttgaagcaga gaagagcgac cttgtgcatc tagagagtga aatagaaaag
     3061 tgcatccgac agctgcctgt cactcacttc tgtgaggaga gggagaagat caagtacacg
     3121 tgcaaattca tggaagtgca caaacccgga gccgcgtgtt catacgtgtg tgcgctcaga
     3181 gtggagagat tctgctgtgc agtgttcgct gcagagcccg aatcctggca cgtggaagac
     3241 agctgtgtga agaggtttac cgcagaggac tgggtgaaac gccagatgga tggcccagca
     3301 tttatatctg gaaaggtgat aagctctcca gaagccctct gcgggaaact gttctcacca
     3361 caggaagcgc atgagcagtt gctcttggca cagttgggct cactttgcga agaaacgctg
     3421 gtcatcacta agagatgggc tttggatcta cccttgcaag acaagcaggg agtcatcttg
     3481 gatgtgcttc agatttccca ggacagtctt ctgaccctgc atggctttgt cctgggaggt
     3541 gaagacctgg aggatgacag cacttttctg agggaactag gcgctgagtt aaagggctat
     3601 tataaacaaa ctgccctaac actaaagcag acgctgataa atctcagtgg ttgcactggg
     3661 aaagtaggca ttaccacaaa gataacatac ttgtgtcata ataaggcagt gtctctttat
     3721 gattcaagct cgaaaataca ctatcccaca aaatattatc tgacagccaa gacagtaacg
     3781 gacttggaga aggctttgag aagtcttatg taatccatgt aactgctcct tctttctgat
     3841 aaaatgcatg gcacctttaa tgcacagaag gcactctagc tagagatcag aacaaagaaa
     3901 attatttatc atgttgttcc ctatgaggta ttgataggtc gatatgaaga tggcaatatt
     3961 attcaatgtt gttcattaac agtcgatgac attcatgtca tcgagttctt tgtgctgctg
     4021 attaacacct gaaagggtat ttactggatt gtaaataccc tttgaggtgt taatacatac
     4081 gagtattgtg cattatttgg aaatgttctc ttttatatct acatttgtga atgattaaat
     4141 ttgtcaacct ttgtcccctg ggggtgatta tgtatgttgt aacttttgct gcagctccag
     4201 ccccagggat ctaggtgtga gaaagagaaa ataaactcaa ggagtttgta tctgcctta
//
