LOCUS       NM_001420005            1900 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus schlafen family member 1 (Slfn1), mRNA.
ACCESSION   NM_001420005
VERSION     NM_001420005.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643284.13776.1,
                                           SRR26643292.42265.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-239               JAXUCZ010000010.1  68474995-68475233
            240-1900            JAXUCZ010000010.1  68479162-68480822
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..1900
                     /gene="Slfn1"
                     /gene_synonym="RGD1309755"
                     /note="schlafen family member 1"
                     /db_xref="GeneID:688900"
                     /db_xref="RGD:1583007"
     exon            1..239
                     /gene="Slfn1"
                     /gene_synonym="RGD1309755"
                     /inference="alignment:Splign:2.1.0"
     exon            240..1900
                     /gene="Slfn1"
                     /gene_synonym="RGD1309755"
                     /inference="alignment:Splign:2.1.0"
     CDS             279..1295
                     /gene="Slfn1"
                     /gene_synonym="RGD1309755"
                     /note="schlafen family member 12; schlafen 1"
                     /codon_start=1
                     /product="schlafen family member 1"
                     /protein_id="NP_001406934.1"
                     /db_xref="GeneID:688900"
                     /db_xref="RGD:1583007"
                     /translation="MNITVETTKPALLLDAGEITLGIQSRKEMENHYRVKENRNILTA
                     LCALINFGEGKVKVQSKNPDYSLAKHGVGDDLETSFKNIWPSTPLVFKQDQLNVFICV
                     QPQSPDGSGGKPATIAINLFMRNGASSVEMSFDVAQEFLEKMAGAGGRSPLARLKGKR
                     PGDGLQEEVHVQELAAAFFKQSKLTKMEKFPFSESKNVEYKSFETKKLLQRVKEILPR
                     TVSAFANTDGGYLFIGLDEKEQQIVGFEAKNCHPKCLESEIEKCIRQLPVTHFCEERE
                     KIKYTCKFMEVHKPGAVCSYVCALRVERFCCAVFAAEPDSWHVEDNHLKRFTTEEWVN
                     QMIA"
ORIGIN      
        1 agtccaaacc acaaaggtct gccaagacaa aagctgagag tgaccacagg cattgtagct
       61 tgttcccctc cgatccaggt gcccatccga gaaggacttc tggtgacagc ctccaagtcg
      121 ctgctgtggg agtctgtctt gggctcttgt ttttctacct ccagccagca ggtgtccaca
      181 gcgcagccaa ctcgcagttg gcttcaagca actgagagag cttcagtaga acagtttagg
      241 tgagggtttc agctcgggag cggcaggact gctggaaaat gaacatcact gttgaaacca
      301 ccaagcctgc actgcttcta gatgcagggg aaatcacact tgggatacaa agtaggaagg
      361 aaatggagaa tcattacagg gtaaaagaga acaggaacat tttaacagct ctgtgtgctc
      421 tgataaattt tggagaggga aaggtcaagg ttcaaagcaa aaatccagac tatagtttgg
      481 ccaaacatgg agtaggagat gatttggaaa cctcttttaa gaacatttgg ccatctacac
      541 ccctggtctt caagcaagat caactcaacg ttttcatctg tgtacaaccg cagagtccag
      601 acggctctgg tgggaagcct gccaccattg caatcaattt gttcatgaga aatggggcat
      661 cttcagttga aatgagtttt gatgttgctc aggagttctt agaaaagatg gcgggcgcgg
      721 gaggaaggtc acctttagca aggctgaaag ggaaaaggcc tggtgatggt ttacaagaag
      781 aagtccacgt gcaggagttg gccgctgctt tttttaaaca gtcaaaactt acaaaaatgg
      841 aaaaattccc ttttagcgaa tccaaaaatg ttgaatataa atcttttgaa acaaaaaagc
      901 tgctacagcg agttaaagag attctccctc gaacggtttc ggcctttgcc aacactgacg
      961 ggggatattt gtttattggt ttggatgaaa aagaacagca aatagttggt tttgaagcaa
     1021 agaattgcca tcctaagtgc ttagagagtg aaatagaaaa gtgcatccga cagctgcctg
     1081 tcactcactt ctgtgaggag agggagaaga tcaagtacac gtgcaaattc atggaagtgc
     1141 acaaacccgg agccgtgtgt tcatacgtgt gtgcgctccg agtggagaga ttctgctgtg
     1201 cagtgttcgc tgcagagccg gattcctggc acgtggaaga caaccattta aagagattta
     1261 ccacagagga atgggtcaac caaatgatag cttaacaagc caggttcagg aaggggaacc
     1321 ggcaattcaa atacatttag ctagggaaga tggaagggtt tctctttggg atttgagcta
     1381 cgatcccaaa ttagtcttga tgattccgtt actgatcctt gccatcatca ctgcatctgt
     1441 aacctacctg ggagcccaga tccctctctc cctgttttta cctcaactct ctctactcac
     1501 ttggaaagaa agcgtcccca ccccaacatc tccccagttg agagctccgt ttccgggagc
     1561 tggcaagtct ttcaggaatc ctccattcag tttcactcct acccctttcc tgtgctcctt
     1621 tctccctaac cttctctcct ctcagtcaca ttattgacaa tgctcggctc cgtggagtat
     1681 gctgcgctgc tctctcaggt cttgcaagag gaaagtctcc gatgaggcca gaccagcacc
     1741 agcacaccca gtctgcaaag ttccccacag cggctcccat ctcccggccc ctccaagctc
     1801 actgctgctt cgtgagcccc ctccaacctc ttgcttttta tgactttttc aataaacaga
     1861 ttgatagaca aataaaagcc tcaacattct gctcatcata
//
