LOCUS       NM_173338               2228 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus solute carrier organic anion transporter family,
            member 6c1 (Slco6c1), mRNA.
ACCESSION   NM_173338
VERSION     NM_173338.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Suzuki T, Onogawa T, Asano N, Mizutamari H, Mikkaichi T, Tanemoto
            M, Abe M, Satoh F, Unno M, Nunoki K, Suzuki M, Hishinuma T, Goto J,
            Shimosegawa T, Matsuno S, Ito S and Abe T.
  TITLE     Identification and characterization of novel rat and human
            gonad-specific organic anion transporters
  JOURNAL   Mol Endocrinol 17 (7), 1203-1215 (2003)
   PUBMED   12677006
  REMARK    GeneRIF: a novel organic anion transporter expressed at high levels
            in the testis
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Meijer DK and van Monffoort JE.
  TITLE     Interactions of cationic drugs and cardiac glycosides at the
            hepatic uptake level: studies in the rat in vivo, isolated perfused
            rat liver, isolated rat hepatocytes and oocytes expressing oatp2
  JOURNAL   Arch Pharm Res 25 (4), 397-415 (2002)
   PUBMED   12214846
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF326113.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF326113.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760384 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q36"
     gene            1..2228
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /note="solute carrier organic anion transporter family,
                     member 6c1"
                     /db_xref="GeneID:287006"
                     /db_xref="RGD:708431"
     exon            1..349
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     CDS             49..2154
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /note="gonad-specific transporter 2; testis-specific
                     transporter TST-2; solute carrier organic anion
                     transporter family member 6A1-like"
                     /codon_start=1
                     /product="solute carrier organic anion transporter family,
                     member 6c1"
                     /protein_id="NP_775460.1"
                     /db_xref="GeneID:287006"
                     /db_xref="RGD:708431"
                     /translation="MGQVQNKKPDAKKDDKHNQETEGLKKIDTYLRTIPTVTKKFKGR
                     PQKKRSPTSAELLLDPKYSASKEGPFGLGPLVFPCLQRFNNIDCFMIFFIASVLIHGA
                     LFALADMILNLYHSLLTLSKRELYFMDFSGYIVSSLVAIFVAHFGGKGNRTKWIAAAC
                     ILMAFGSILLGFPFSKYEIMKSGGQRVELCVEENKRRNIHCVTNSNPDRTKCICFFII
                     GQCLNGIAGMPIYILGKTFILDHVPTRSAGFYLALGHSAHLMGYFLGIFGGMKNLSPP
                     PKEKLSAVDSAKIHLLLQFGWWKTFLFVAAISFSVFLVLLCFPTSLPGAHKLKLAKRK
                     EPPTFDKRLKDQKIQPRFKGFVFAIWYMLRNPLLMTQAMCKVSESFAFHTSLEFLPYH
                     LQTQFSITPQIASMLTGLFVIPGGVIGHFLGGLIVDRLEMTNKNKLKFSLVTSVVSVA
                     LFLLIFFVECETTKFAGINEDYDGLGKLGNLTAGCNYHCACTTSLYSSVCGRDEKEYF
                     SPCFAGCSATKVQQNEKTYYNCSCIKEGLTTSDADGHFIDATDGTCNSNCLTLPLFFA
                     FYFSATVFSTMCSTPIILIILQSVPANFSSLGQGVTVAITKFTASVPEPALFGTASSV
                     ACKFWDINACGVREKCWIYNKTTLVYVFIGIWVSFKLFTALLNIYAIHIYDYVVKGKI
                     SDSKTTHVKASKAQKERRA"
     exon            350..610
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            611..802
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            803..899
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            900..1018
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            1019..1128
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            1129..1273
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            1274..1469
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            1470..1623
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            1624..1811
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            1812..1876
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            1877..2014
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            2015..2177
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
     exon            2178..2228
                     /gene="Slco6c1"
                     /gene_synonym="GST-2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgcctcaaaa tacatgcgca gtatctacgg agctgcttcc gataagccat gggccaggtc
       61 cagaataaaa agccagatgc caagaaggat gacaagcaca accaggaaac tgaaggatta
      121 aaaaaaatag acacatatct gagaacaatt ccaactgtca cgaagaagtt taaaggtcgc
      181 ccccaaaaga aaaggtctcc tacaagtgcc gaactgttat tagatccaaa atacagtgct
      241 tccaaggagg ggccattcgg tttgggccct ctagttttcc cttgtttaca gcgtttcaac
      301 aacattgatt gctttatgat ttttttcatt gcatcggtct taattcatgg tgctttattt
      361 gctttggctg atatgatttt aaacttatat cacagtctac ttactctgtc aaagagggag
      421 ttgtatttca tggatttcag tggttatatt gtatcttcct tggtagcaat atttgtagca
      481 cactttggag gtaaagggaa caggacaaaa tggattgcag ctgcctgcat tttaatggca
      541 tttggatcaa ttttacttgg ttttcctttc tctaaatatg aaattatgaa gtcaggggga
      601 caaagagtag agttgtgtgt agaagaaaat aaaaggagaa atatacattg tgttacaaac
      661 agtaatccgg acagaacaaa atgtatctgt ttcttcatca ttgggcagtg tctgaatgga
      721 attgcaggga tgccaattta tattcttggc aagaccttca ttttggacca tgttcccaca
      781 agatcagccg gcttctatct ggctcttgga cactctgcac atctgatggg atactttctc
      841 ggtatttttg gaggaatgaa gaatttgagt ccaccaccca aagaaaaatt aagtgcagtt
      901 gactctgcta agatacatct actgttgcag tttgggtggt ggaaaacttt tttgttcgtt
      961 gctgcaatct cgttttctgt atttttagta ttgttatgct ttccaactag tttacccggt
     1021 gcacacaagt taaaacttgc gaaaagaaag gaacctccta cctttgacaa gagactgaaa
     1081 gatcagaaaa ttcaacctcg tttcaagggt tttgtttttg ccatttggta catgttgagg
     1141 aacccgctgc tgatgaccca ggcgatgtgc aaagtttcag agagttttgc tttccataca
     1201 tctttagagt ttctgcctta ccacttgcag actcagtttt caataactcc ccagattgct
     1261 tctatgctca caggactgtt tgtaattcca ggaggtgtaa ttggccattt tcttggaggt
     1321 ttaattgttg acagattgga aatgactaat aagaacaagt tgaaattttc attagtgaca
     1381 tctgttgtat cagttgcact tttcctatta atcttttttg tagagtgtga aacaacaaaa
     1441 tttgctggaa tcaatgaaga ctatgatggc ttaggcaaac ttggaaacct tacagctgga
     1501 tgcaattatc actgcgcttg cacaacttcc ctatatagtt ctgtgtgtgg aagagatgaa
     1561 aaagagtatt tctctccatg ctttgcagga tgctctgcta cgaaagtaca acagaatgaa
     1621 aagacatact acaattgttc ttgcattaaa gaaggattga ccacttcaga tgccgatggt
     1681 cactttattg atgctactga tggaacatgt aatagcaact gtcttacttt acctttgttt
     1741 tttgcctttt acttttctgc aactgtgttt tctactatgt gtagtacacc catcatcctg
     1801 attatccttc aaagtgtacc tgccaatttc agttcacttg gccagggcgt gacagttgca
     1861 attacgaaat ttactgcatc cgtccctgaa ccagcattgt ttggaactgc atcatcagta
     1921 gcttgtaaat tctgggacat taatgcatgt ggagtcagag aaaagtgttg gatctataat
     1981 aagacaacac tagtctacgt atttattgga atttgggttt ctttcaaatt atttacagct
     2041 ttgttgaaca tttatgcaat tcatatatat gattatgtgg taaagggcaa aatcagtgac
     2101 agcaaaacca cacatgtaaa agcttcaaag gcacaaaaag aaagaagagc ttaattaata
     2161 aatgttttct tcactgggac tggagaatct gtgaggttcc aagttctaag gacagcagtc
     2221 tatccttc
//
