LOCUS       NM_001012100            1932 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus solute carrier family 7 member 13 (Slc7a13),
            mRNA.
ACCESSION   NM_001012100 XM_232812
VERSION     NM_001012100.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1932)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Apr 8, 2021 this sequence version replaced NM_001012100.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085796.1, SRR26643287.12826.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676787, SAMN16676788
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-752               JAXUCZ010000005.1  38074298-38075049
            753-884             JAXUCZ010000005.1  38083434-38083565
            885-1246            JAXUCZ010000005.1  38091226-38091587
            1247-1932           JAXUCZ010000005.1  38094399-38095084
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q13"
     gene            1..1932
                     /gene="Slc7a13"
                     /note="solute carrier family 7 member 13"
                     /db_xref="GeneID:313089"
                     /db_xref="RGD:1311633"
     exon            1..752
                     /gene="Slc7a13"
                     /inference="alignment:Splign:2.1.0"
     CDS             62..1501
                     /gene="Slc7a13"
                     /note="sodium-independent aspartate/glutamate transporter
                     1; solute carrier family 7 (anionic amino acid
                     transporter), member 13; solute carrier family 7,
                     (cationic amino acid transporter, y+ system) member 13"
                     /codon_start=1
                     /product="solute carrier family 7 member 13"
                     /protein_id="NP_001012100.1"
                     /db_xref="GeneID:313089"
                     /db_xref="RGD:1311633"
                     /translation="MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYS
                     SMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTS
                     LFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSW
                     LQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYF
                     AFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDA
                     VALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNV
                     HSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHR
                     PYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIW
                     FQKLTCYLQLLFNICIPDVSDEHVAEEES"
     exon            753..884
                     /gene="Slc7a13"
                     /inference="alignment:Splign:2.1.0"
     exon            885..1246
                     /gene="Slc7a13"
                     /inference="alignment:Splign:2.1.0"
     exon            1247..1932
                     /gene="Slc7a13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcatctata taggtagaaa cattcacaga ctagaatttt gttgagcgta aactactctc
       61 aatggcaatg gatatagaga agaaaatata tctcaagaga caacttggat atttctgggg
      121 gacaaatttt ttaattatca atataattgg tgcagggata tttgtgtccc ccaagggagt
      181 gctacagtac tcttccatga atgtgggagt ctccttgtgt gtttgggttt tctgtgcagt
      241 gctgtccatg accagtactc tctgtgctgc agagattgga ataaccttcc catacacggt
      301 ggctcactac tattttttaa agagatgctt tggccctttt gtggcattcc taagactttg
      361 gacttccttg tttacgggcc caggcgtact ggctagtcaa gctctgctac tcgccgagta
      421 tggcattcag cctttctatc ccagctgctc tgccccggct gtaccaaaaa aatgtctggc
      481 cctggcgatg ctgtggattg tgggaattct gaattctcgt ggtgtgaaag agctgtcatg
      541 gcttcagaca gtgagcatgg tgctgaagat gggtatactt agcttcattt ccctcagcgg
      601 cttgttcttg ctggtgacag ggaggaagga gaacgtgcga aggcttcaga atgcttttga
      661 tgccgagttt ccagaggtct ctcggttgat agaagctatc ttccaaggat acttcgcatt
      721 ttctggcgga ggaagtttta catacgtagc aggtgagctg aaggaaccca gcaaaacaat
      781 tcctagatgc atattcacag cgctgcctct ggtaactgtg gtgtacttac tggctaatct
      841 ttcctacctg acagttctga gcccccagga acttctctct tcagatgctg tggctcttac
      901 atggacagac agggtcattc cccaattaac atggagtgtc ccttttgcta tttctgcctc
      961 actgttcagc aacctcgtga ctagtgtatt tgagacatca agaacgtcat atattgcaag
     1021 ccggaatggg cagctgccct tgttgtgtag taccctaaat gttcactcct ctccctttat
     1081 agctgtgcta ctagatgtca gtatggggtc cattgcaatt gtcttaacaa acctaattga
     1141 gctgataaac tatctatttt ttgttttttc catttggact gtcttatcag taatagggat
     1201 cttgaaactg aggtaccagg agcctaatct acacagacca tataaggtgt tttctccatt
     1261 cctattcata acagctgcca tcagcctgag catggttttg attccactta tcaagtctcc
     1321 gaagatgcaa tatatctatg tgttcctctt ctttctcggt ggactactgt tttatgtgcc
     1381 attgatacac tttaaattga agttaatttg gttccagaag ttgacttgct atctgcagtt
     1441 actgtttaat atttgcatcc ctgatgtgtc tgatgagcat gtggcggaag aagaaagttg
     1501 agaaagaata gccttttgta accgtatcat gttccaacaa aaggttaagt gtaggctaga
     1561 atagtaaaat ggcaacccta gaaatggaaa tggtgtatag aaaagtacac aggaagttcc
     1621 tggttttgac aatgacaaag aaagtgcctg gagagatggc tctgctttta agggtaccag
     1681 ttgccctccc agaggactga agttcaatcc acaggaccca catagacgct cataactctc
     1741 taactttagg cacagaggag ccaatatcct cttctggatt ctgaaggcat tgcacacatg
     1801 tggtgtacag atagacatgt aggcacccat gcacatttac aaaaaaaaaa agaaaaagaa
     1861 aaagaaagaa gaatagcaaa gaaagtatta tacataacta aacattttta atacaaatta
     1921 aattcctagt tt
//
