LOCUS       NM_001109146            2451 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus solute carrier family 6 member 21 (Slc6a21),
            mRNA.
ACCESSION   NM_001109146 XM_001080716 XM_574446
VERSION     NM_001109146.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            CH473979.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_574446.2, XM_001080716.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..2451
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /note="solute carrier family 6 member 21"
                     /db_xref="GeneID:499151"
                     /db_xref="RGD:1562492"
     CDS             1..2232
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /codon_start=1
                     /product="uncharacterized protein LOC499151"
                     /protein_id="NP_001102616.1"
                     /db_xref="GeneID:499151"
                     /db_xref="RGD:1562492"
                     /translation="MDQSFEEVPEPKKEEPTEEEPTASKKSTDPTSLSWGFKTREVRI
                     TKISSHFQAKKTENILILVAFSIGLGSTWRFPYLCHQNGGGSFLLMYLILLLLLGIPL
                     MYMEMVIGQWLRVDNIRAWKHLVPWLSGVGYSSMLACALVILYNSALVSWSLFYLGQS
                     FDYPTPWENCPLVKNFSTSDISCLRTEPHQFFWYHTVLRASDQIEEGIEVLVLNVTLC
                     LFATWFFLYITMVTRIKISVLMMIFSILFPNVLLFCFFTHIFFVKGVRDSLKRLVTTE
                     LSILASLDAWRQAGGHVLYSLGLGMGTIITFSSYQTRGENYIKWASFVAMVNLMTSLL
                     SSSVIFLMLGFWIENSGTPCVESNVSNLLSLIANGVLPQVAWPPKDIIHRSPLEYLDW
                     ISQLPKNIRNEVAHFTLPCSILVQKEKFMEGPGLAYVAFSQAITLFPGSSFWAIIFFM
                     SLVIMGLGTMTTLVEGIALSLQKSISTLEKHPKLVPVIICLGGFLGSLVFSSRPGSYV
                     VFLFDDHLVPMVLIMIVAFQNLSLAWVYGIKRFRAEMFGQLGRLVWAPFTFLWSYVTL
                     PTLLVLLTIYFLNLYFSESLSYVSWNNSMSQEVKQPYQRIALGWVTFLSVLALLPIPM
                     YPLQHWWYLDDQIICETIEKPLSSKKTVTVPKRVTQWPVHPMRKLTLRNQEKSKALFQ
                     SKTPPEALLNPQILITKKGSENYSSFSFPSTRLGGVSMAFPTPEASRHTGLPEGSLDF
                     HSK"
     exon            1..253
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
     exon            254..411
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
     exon            412..538
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
     exon            539..717
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
     exon            718..828
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
     exon            829..1070
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
     exon            1071..1257
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
     exon            1258..1459
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
     exon            1460..1619
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
     exon            1620..1785
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
     exon            1786..2451
                     /gene="Slc6a21"
                     /gene_synonym="RGD1562492"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggaccaat cctttgaaga agttccagaa cctaagaagg aggaacccac ggaggaggag
       61 cccacagcca gcaagaagag caccgaccca acatccctgt cctggggctt caagacccga
      121 gaggtccgta tcaccaagat ctcaagccac ttccaggcta agaagacaga gaatatcctg
      181 atcctggtgg ccttctccat cggacttggc agcacgtggc gcttcccgta cctctgccac
      241 cagaacggcg gaggaagctt tctgctgatg tatctcatcc tcctcctgtt gctggggatc
      301 cccctcatgt acatggagat ggtcatagga cagtggctac gcgtggacaa catccgggcc
      361 tggaaacacc tggtcccctg gcttagtggt gtgggctact ccagcatgct ggcctgtgcc
      421 ctggtgatcc tgtataacag tgccctggtc tcctggagcc tcttctacct tggccagtcc
      481 ttcgattacc ctacaccctg ggaaaactgc cccctggtga aaaacttcag tacctctgac
      541 atctcctgcc ttcggacaga gccccatcag tttttctggt atcacaccgt ccttcgagcc
      601 tccgatcaaa tagaagaagg gatagaagtg ctggttctga acgtgaccct gtgcctcttt
      661 gccacatggt tcttcctcta tatcaccatg gtcaccagga taaagatttc agtgctaatg
      721 atgattttct ccatattgtt ccccaatgtc ctcctcttct gcttcttcac ccacattttc
      781 ttcgtgaaag gtgtgaggga cagcctcaag cgcttggtga ccacagagct ttctatcttg
      841 gcatcactgg acgcatggcg tcaggctgga ggccatgttc tctactccct cggccttggc
      901 atgggcacca tcataacttt ctcctcctac cagaccagag gtgagaacta catcaagtgg
      961 gcatcctttg tggccatggt caacctgatg acttcgttgc taagctcatc tgtcatcttc
     1021 cttatgctgg gcttctggat agaaaacagt ggcactccat gcgttgagag caatgtctcc
     1081 aatctgctca gcctgatagc caacggtgtg ctaccccagg tcgcctggcc tcctaaagac
     1141 atcatccatc gatccccact ggaataccta gactggatca gccagctccc caagaacata
     1201 cggaacgagg tcgcccattt caccctgccc tgcagcatcc tggtgcagaa ggaaaagttc
     1261 atggagggcc ctggcctggc atatgtggcc ttctctcaag ccatcacact gtttcccggt
     1321 tcctctttct gggccatcat cttcttcatg tctctggtta tcatgggtct gggcaccatg
     1381 acaacactcg tggagggcat cgctctttct ctgcagaaaa gtatctccac cctggagaag
     1441 catcccaagc tggtaccagt gattatctgc ttgggaggat ttctgggtag cctcgtcttc
     1501 tccagtcgcc ctggcagcta cgtggtgttc ctgttcgatg accacctggt ccccatggtc
     1561 ctcatcatga tcgtggcgtt ccagaacctc tctctggctt gggtctatgg aatcaagagg
     1621 ttcagggctg agatgttcgg ccagctgggc cgcctggtat gggcaccctt caccttcctg
     1681 tggagctacg tgacattgcc cacactgctg gtcctgctca ccatctactt cctgaatctc
     1741 tacttcagcg aatccctctc ttatgtctcc tggaataata gcatgagcca ggaagtgaag
     1801 cagccttacc agaggatagc cctgggctgg gtcaccttcc tcagtgtcct ggcactgctg
     1861 ccgatcccca tgtacccgct gcagcactgg tggtacctgg atgaccaaat catctgtgaa
     1921 accatagaaa aacctttgtc ctccaaaaag acagtgaccg tgcccaaaag agtcacccag
     1981 tggcctgtgc accccatgag gaaactcacc ctcaggaacc aggagaaaag caaggcttta
     2041 ttccaaagca agactccccc agaggcctta cttaaccccc aaattctgat aacaaaaaag
     2101 ggcagtgaaa actactccag cttcagcttc cccagcacca gactcggcgg tgtctccatg
     2161 gccttcccta cccctgaggc atcaaggcac actggcctcc cagaaggtag tcttgacttc
     2221 cacagcaagt gacagacttg agacgtgtga agggcaagct cgcaagagcc ctgcttagca
     2281 gccgccaccg gtataaccag cgatgtgcac caagcccagt actggccgca cggaaagcag
     2341 aagacgggtg tgcagacacc cagcccggac tttttgtagc ccccatgggc cccagacagt
     2401 catggatggc tcagaaatcc atcctctagc actggacact gttcccaggg c
//
