LOCUS       NM_001034952            1929 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus solute carrier family 66 member 3 (Slc66a3),
            mRNA.
ACCESSION   NM_001034952 XM_216676
VERSION     NM_001034952.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CB556892.1,
            BC081879.1 and CK477351.1.
            
            On Oct 22, 2005 this sequence version replaced XM_216676.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK477351.1, BP500375.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16093044 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-119               CB556892.1         155-273
            120-397             BC081879.1         26-303
            398-858             CK477351.1         221-681
            859-1929            BC081879.1         2014-3084
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q16"
     gene            1..1929
                     /gene="Slc66a3"
                     /gene_synonym="Pqlc3; RGD1306818"
                     /note="solute carrier family 66 member 3"
                     /db_xref="GeneID:298906"
                     /db_xref="RGD:1306818"
     exon            1..314
                     /gene="Slc66a3"
                     /gene_synonym="Pqlc3; RGD1306818"
                     /inference="alignment:Splign:2.1.0"
     CDS             172..780
                     /gene="Slc66a3"
                     /gene_synonym="Pqlc3; RGD1306818"
                     /note="PQ-loop repeat-containing protein 3; PQ loop repeat
                     containing 3"
                     /codon_start=1
                     /product="solute carrier family 66 member 3 precursor"
                     /protein_id="NP_001030124.1"
                     /db_xref="GeneID:298906"
                     /db_xref="RGD:1306818"
                     /translation="MEAGLLWFCNWSTLGVCAALKLPQIYAQLAARSARGISLPSLLL
                     ELAGFLVFLRYQHYYGNPLLTYLEYPILIVQDIVLLLFVFHFNGNVKQALPYMAVFVS
                     SWFILSLQKWIIDLAMNLCTVISAASKFAQLQYLWKAQDSGAVSALTWGLSAYTCATR
                     IITTLMTTNDLTILLRFVIMLALNIWVTATVLHYRKSVTKAE"
     exon            315..397
                     /gene="Slc66a3"
                     /gene_synonym="Pqlc3; RGD1306818"
                     /inference="alignment:Splign:2.1.0"
     exon            398..467
                     /gene="Slc66a3"
                     /gene_synonym="Pqlc3; RGD1306818"
                     /inference="alignment:Splign:2.1.0"
     exon            468..525
                     /gene="Slc66a3"
                     /gene_synonym="Pqlc3; RGD1306818"
                     /inference="alignment:Splign:2.1.0"
     exon            526..646
                     /gene="Slc66a3"
                     /gene_synonym="Pqlc3; RGD1306818"
                     /inference="alignment:Splign:2.1.0"
     exon            647..688
                     /gene="Slc66a3"
                     /gene_synonym="Pqlc3; RGD1306818"
                     /inference="alignment:Splign:2.1.0"
     exon            689..1904
                     /gene="Slc66a3"
                     /gene_synonym="Pqlc3; RGD1306818"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctaagcaga gcaaactccc ggcggagcgc actcgcagta cagcagctcg gggcgtggtc
       61 gaggcggggc ctggccggcg ggaaggcgga aggactcttt ggattttgag cctcaggtta
      121 taacctataa gatcccgaag ccccctggcc tagcacgccc gtgactgcag aatggaggcc
      181 gggctgctat ggttctgcaa ctggagcacg ctgggcgtgt gcgccgcact caaactgccg
      241 cagatctacg cgcagctggc ggcgcgcagc gcacgaggga tcagcctccc tagtttactt
      301 ttggagctgg ccgggttcct ggtcttcctt cgttatcaac attactatgg gaacccactg
      361 ctcacctacc tggaataccc cattctcatc gtacaagaca ttgtcctcct gctcttcgtc
      421 tttcatttca atgggaacgt gaagcaagcc ttgccgtaca tggctgtatt tgtgtcttct
      481 tggttcatcc tcagcctgca gaaatggatc atcgacttgg ccatgaactt atgcacagtc
      541 attagtgcag ccagtaagtt tgcccagctc cagtatttgt ggaaggcaca agattcggga
      601 gctgtgagtg cactgacatg gggcctctcc gcctacacct gtgcaacaag aataataaca
      661 actttaatga ccactaatga cctgacaatt cttctacgtt ttgtgatcat gttggcttta
      721 aatatatggg taacagcaac ggtacttcac taccggaagt ctgtcaccaa agctgaatga
      781 tggatgtatt ctttctacac acagtggact tcaaatgacc aaatcagagg atgcaccact
      841 gcttttcatt gctaccttta aaattgtttc ctagtcaacc atttcagaga ctttagacca
      901 ggtttgttaa agcacttggc tgaatatgga agtacaaacc tataatccca gcactgggga
      961 gtctgtggta gtatgggcta cacagcaaac tcagacacag aagtcaagga aggagggaaa
     1021 gagacacttg ttttaaaaag gccaacttcc ttcccctacc ctcctaggtt gtgggagggt
     1081 ttagattggg ttgtgtgtag ttttgcccct cccttcccca caagatagtc tcgctacata
     1141 gcccaagcta tcctccaacc tgtgaccctc cattgagtac tgggaatgct tgactagagt
     1201 gagccaccac acctggcttt gacaattcaa atgatggaac ctgcccaaga aaccaccttc
     1261 acccttaaaa tcacggttaa gttctctgaa gagccagcta catctacact gtggctttca
     1321 gaatattaag cagccttccc acaaggagtg gggtctgctc agtcagaagt ggaactgttc
     1381 acacctgcgc agtttaactc tagggcttgg ccttgttatg tcataatgca gtataacatc
     1441 ctctcaatcc aagcagggct atcaaagtgt gcacaggtgt atactaagca gttctccaac
     1501 acagtgtgcc ttagggagtt cctaaataga gccctatctg tttagatcag aaagcctcag
     1561 cagtctctct atttaagcac aatgccacca ttttttaaag ggctacatct caattcctat
     1621 tgctagaact tagttttagc tactggaagg tatatataca gtaaagagta ttgcgaagtc
     1681 ctacccaatt cttagggatt ttgttcatac taaagtaaga ctatcctaca ttgttgtctg
     1741 cagaacttcc tctgatattt tataaatcca atctttaaaa gcttagtttc ttcttctatg
     1801 tgaatgtcat tattctggta tactgcaaga aagtaaacga tgtttgctgg aaaatgttta
     1861 gttttccata tttaataaac tttaatttgt tgaactccac agaaaaaaaa aaaaaaaaaa
     1921 aaaaaaaaa
//
