LOCUS       NM_001395128            3398 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus solute carrier family 5 member 9 (Slc5a9), mRNA.
ACCESSION   NM_001395128 XM_017593538
VERSION     NM_001395128.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3398)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jun 4, 2021 this sequence version replaced XM_017593538.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643287.13779.1,
                                           SRR26643288.23163.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMEA5760389,
                                           SAMN11044071 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-230               JAXUCZ010000005.1  131961693-131961922 c
            231-302             JAXUCZ010000005.1  131959418-131959489 c
            303-407             JAXUCZ010000005.1  131956061-131956165 c
            408-572             JAXUCZ010000005.1  131955586-131955750 c
            573-678             JAXUCZ010000005.1  131954303-131954408 c
            679-759             JAXUCZ010000005.1  131953416-131953496 c
            760-965             JAXUCZ010000005.1  131952979-131953184 c
            966-1101            JAXUCZ010000005.1  131952655-131952790 c
            1102-1209           JAXUCZ010000005.1  131952376-131952483 c
            1210-1360           JAXUCZ010000005.1  131949157-131949307 c
            1361-1529           JAXUCZ010000005.1  131947203-131947371 c
            1530-1745           JAXUCZ010000005.1  131945627-131945842 c
            1746-1929           JAXUCZ010000005.1  131942235-131942418 c
            1930-3398           JAXUCZ010000005.1  131938216-131939684 c
FEATURES             Location/Qualifiers
     source          1..3398
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q35"
     gene            1..3398
                     /gene="Slc5a9"
                     /note="solute carrier family 5 member 9"
                     /db_xref="GeneID:366441"
                     /db_xref="RGD:1311383"
     exon            1..230
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     CDS             72..2138
                     /gene="Slc5a9"
                     /note="solute carrier family 5 (sodium/glucose
                     cotransporter), member 9; solute carrier family 5
                     (sodium/sugar cotransporter), member 9"
                     /codon_start=1
                     /product="sodium/glucose cotransporter 4"
                     /protein_id="NP_001382057.1"
                     /db_xref="GeneID:366441"
                     /db_xref="RGD:1311383"
                     /translation="MSKELAAMEPGASRDGLRAETTHQALGSGVSLHTYDIVVVVIYF
                     VFVLAVGIWSSIRASRGTIGGYFLAGRSMTWWPIGASLMSSNVGSGLFIGLAGTGAAG
                     GLAVGGFEWNATFLLLALGWIFVPVYIAAGVVTMPQYLKKRFGGQRIQVYMSVLSLIL
                     YIFTKISTDIFSGALFIQMALGWNLYLSTVILLVVTAVYTIAGGLTAVIYTDALQTVI
                     MVGGALVLMFLGFREVGWYPGLQQLYRQSIPNVTVPNTTCHLPRSDAFHMLRDPVNGD
                     IPWPGLIFGLTVLATWCWCTDQVIVQRSLSAKSLSHAKGGSVLGGYLKILPMFFIVMP
                     GMISRALYPDEVACVDPDICQRVCGARVGCSNIAYPKLVMALMPVGLRGLMIAVIMAA
                     LMSSLTSIFNSSSTLFAIDVWQRVRRQASEQELMVVGRLFVVFLVLISILWIPIIQSS
                     NSGQLFDYIQSITSYLAPPITALFLLAIFCKRVTEPGAFWGLMFGLVVGILRMILEFS
                     YSAPACGEKDRRPAVLKDFHYLYFALLLCGLTAIIIVIISFFTEPIPDEKLARLTWWT
                     RSCPISELQKKVSVSVNNTESDNSPALAGRPVMEGTAGDEEEANTTSEPEQPEVLHRS
                     WGKWLWNWFCGLSGTPQQALSPAEKAELEQKLTSIEEEPLWRCVCNINAIILLAINIF
                     LWGYFA"
     exon            231..302
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            303..407
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            408..572
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            573..678
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            679..759
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            760..965
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            966..1101
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1209
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1210..1360
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1361..1529
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1530..1745
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1746..1929
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
     exon            1930..3398
                     /gene="Slc5a9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 taatcattaa aggaaaggaa tgaagtcagc aagacatcaa agtccagcct tctgagaacc
       61 aacagtaaca gatgagcaag gagctagcag caatggaacc tggagcttca agggatggac
      121 tcagagctga gacaacacac caagccctgg gctctggagt cagcctgcac acctatgaca
      181 tcgtggtggt ggtcatctac tttgtctttg tccttgctgt gggaatttgg tcgtccatcc
      241 gcgcaagccg agggaccatt ggtggctatt tcctggctgg aagatccatg acctggtggc
      301 caattggagc atctctaatg tccagcaatg tgggcagtgg cttattcatc ggcctggctg
      361 gaacaggggc tgctggaggc cttgctgtgg gtggcttcga gtggaatgca acttttctgc
      421 ttctggccct gggctggatc tttgtccctg tgtacatcgc agctggtgtg gtcaccatgc
      481 cacagtacct gaagaaacga tttggggggc agaggatcca ggtgtacatg tcagtcctgt
      541 ctctcatact ctacatcttc accaagatat cgactgatat cttctctgga gccctcttca
      601 tccagatggc cttgggctgg aatctctatc tctccacagt catcctgctg gtggtgacag
      661 ctgtctacac cattgcaggg ggcctcacag ctgtgatcta cacagatgct ctacagaccg
      721 tgatcatggt tgggggagcc ctggtcctca tgtttctggg ctttcgggag gtcggctggt
      781 acccaggctt gcagcagctc tatagacagt ccatccccaa tgtcacagtt cccaacacta
      841 cctgtcacct cccacggtct gatgccttcc acatgcttcg agatcctgtg aacggggaca
      901 tcccctggcc aggtcttatt tttggcctca cagtcttggc cacctggtgt tggtgcacgg
      961 accaggtgat tgtgcagagg tctctctcgg ccaagagtct ttcacatgcc aagggaggat
     1021 cagtgttagg gggctaccta aagatcctcc caatgttctt cattgtcatg cccggcatga
     1081 tcagcagggc cctgtaccca gatgaagtcg cctgtgtgga ccctgacatc tgtcagagag
     1141 tgtgtggggc cagagttgga tgctccaata ttgcctaccc caaacttgtt atggctctca
     1201 tgcctgtggg tctgcgaggc ctgatgattg ccgtgatcat ggctgccctc atgagctcac
     1261 tcacctccat cttcaacagc agtagcaccc tgtttgccat agatgtgtgg cagcgagtcc
     1321 gcaggcaggc atcggagcaa gagctgatgg tggtaggcag gttgtttgta gtcttcctgg
     1381 tactcatcag catcctctgg atccccatca tccagagctc caatagtggg cagctctttg
     1441 actacatcca atccatcacc agctacctag ccccgcccat cacagccctc ttcctgctgg
     1501 ccatcttctg caagagggtc actgagcctg gtgccttctg gggcctcatg tttggcctgg
     1561 tagtgggaat actgcgtatg attctggagt tctcatactc agccccagcc tgtggggaga
     1621 aggacaggcg gccagctgtt cttaaggact tccactacct gtactttgcc ctcctcctct
     1681 gtggacttac cgccatcatc attgtcataa tcagcttctt cacggagccc atccccgacg
     1741 aaaagcttgc tcgcctgacc tggtggacaa ggagctgtcc catatctgaa ctacagaaga
     1801 aagtctctgt gagtgtgaac aacacagaga gtgacaactc tccagcactg gcagggaggc
     1861 cagtgatgga gggcactgca ggagatgagg aagaagcaaa caccacctca gagcctgaac
     1921 aaccagaagt cctacacagg tcctggggga aatggctgtg gaactggttc tgcggactct
     1981 ctggaacacc acagcaagca ctgagcccag ctgagaaggc tgagctggag cagaagctga
     2041 ccagcatcga ggaagagcca ctctggagat gtgtctgcaa catcaatgcc atcatcctgc
     2101 tggccatcaa catctttctc tggggctatt ttgcatgact ccagagacta gggtttagtt
     2161 gaaatgagta aaaccactga accctggtcc gtccccaaga ccaaaggcag gctctctttc
     2221 caacttgctg tgctaactgc agaccacaga gactgagagc aaaagagcct tgaggagcat
     2281 ctgttctcat atgcttgtaa ggtggagata tgaagggcta gagtggtcac taggatcacc
     2341 caaagtcata aagcaggact tacactaggt ctccaactcc agctctcttt ctattttact
     2401 accctgtaat cctacctcaa aaacactatc ccctccatcc aatgaagata ttcattgtat
     2461 gtgtatcttc cagttaaata catagtaaga aaatgggtag agaattctat aaaaattatt
     2521 cttgtatact cgttcccttt ctgcttcctg tttccctttc cctccttggc tctcagtaag
     2581 atgagtccag tgagaagggt cttatcatgc cgttggtttc cattgtgcct gtcaatccca
     2641 taagagcaaa gagcacagat aacatgacag gtgtggagac aagtgctcca agaccaggat
     2701 cctccttggc acaattctaa ttccacttat gtccccaaca acctttccac atcctaggaa
     2761 cttggagcct agcttgagcg atgtattgaa aataacagga atcaaagagc cctagggagc
     2821 agagaggaca gcctgggggt gggcacacca tgacattcac ccctctgcct ttatttgcca
     2881 aaacttcttc cctgaaatat attgaagacc atgtctttga gcaacttctc aggaagattt
     2941 ccaaatgctg cacactggat caaggtccca ctcagaccct acaatgcata tgctgcctcc
     3001 ttgtggccct atcatactgc cctgcagtat acattccctt gtagatggtg catgcctagg
     3061 agcagggatc aatggtgatg tccaaactgg ctttgtacct atcaacaaaa gaagccaata
     3121 gatgcttgtt ggattcatat gcacttccag gccctgtgcc ttttgctctc tggatggtga
     3181 ggaagagagt tatggagttg gcttctggag aagagactct gtgaagtatc atgagcagct
     3241 gagtctcagg catataggct gaatggtaca gatgcagcca agaatggccc ttctccctct
     3301 cctctggtcc tctgcaatgc atttttgatc accgtgtcaa tgactgctca ttctaactga
     3361 agacaaataa aattccattt cattaacctg cagacaca
//
