LOCUS       XM_008772932            2874 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus solute carrier family 5 (neutral amino
            acid transporters, system A), member 4b (Slc5a4b), mRNA.
ACCESSION   XM_008772932
VERSION     XM_008772932.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008772932.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008772932.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2874
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2874
                     /gene="Slc5a4b"
                     /note="solute carrier family 5 (neutral amino acid
                     transporters, system A), member 4b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 32 Proteins, and 76% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:294342"
                     /db_xref="RGD:1309867"
     CDS             1..1983
                     /gene="Slc5a4b"
                     /codon_start=1
                     /product="solute carrier family 5 member 4"
                     /protein_id="XP_008771154.1"
                     /db_xref="GeneID:294342"
                     /db_xref="RGD:1309867"
                     /translation="MASTLSPSTAPRTEEPPEVSERIQNAADISVIVIYFLVVLAVGL
                     WSMVRSNRGTIGGFFLAGRDVSWWPMGASLFASNIGSNHFVGLAGTGAASGIAIAAVE
                     WNALLMVLVLGWVFVPIYIKAGVTTMPEYLRKRFGGKRLQIYLSVLSLFIMVAIQTSS
                     TIFSGAIFIQLALGLNLYLAVFILLAITAFYTVAGGLASVIYTDSVQTFIMLVGSLIL
                     MGFAFAEVGGYESFTEKYMNAIPSVVEGDNLTISPKCYTPQPDSFHIFRDPINGDIPW
                     PGLIFGMTILAIWYWCADQVMVQRCLCGKNMSHVKAACIMCGYLKLLPMFLMVMPGMI
                     SRILYTDKVACVVPSECVKQCGTAVGCTNYAYPTLVLELMPDGLRGLMLSVMLASLMS
                     SLTSIFNSASTLFTMDLYTKIRKKASERELMVAGRVFGIVLIVISILWVPLIQASQNG
                     QLFHYISSFSSYIGPPVGAVFLLAIFCKRVNEQGAFWGLMVGLVIGLIRMITEFIYGT
                     GSCLEPSNCPRIICGVHYMYFAIILFFVSILVILGVSFLTEPIPDVHLYRLCWSLWNN
                     TEERIDLDAEQETREEVGGALEEDDAEQSRGCLRRACSLFCGLQSTGPKLTEEEEAAL
                     RQKFSDTSEKPLWRNVVNINAILLLAVAVFVHAYFA"
ORIGIN      
        1 atggctagca cactaagtcc cagcaccgcg cctcggaccg aggagcctcc tgaggtgtca
       61 gagcgcattc agaatgcggc tgacatctca gtcatcgtca tctacttcct agtggtgctg
      121 gctgtggggc tgtggtcaat ggtgagaagc aacagaggca ccattggagg cttcttcctg
      181 gctggtcggg acgtgtcctg gtggccgatg ggcgcctctc tctttgccag taacatcggc
      241 agcaaccact tcgtgggctt ggctgggacg ggagctgcct caggaattgc tattgcagcg
      301 gtggaatgga atgccctgct tatggtgctg gttcttgggt gggtgtttgt ccccatctac
      361 atcaaggcag gggtgacgac catgccagag tacctcagga agcgcttcgg tgggaagaga
      421 ctgcaaatct acctttctgt cctctccctc ttcatcatgg tggctattca gacttcctca
      481 accatatttt ccggagccat atttattcag ttggccttgg gattgaacct gtacctggcc
      541 gtcttcatcc tcttggctat cactgctttt tacacggtgg ccgggggctt ggcctcagtg
      601 atctacacag actctgtgca gactttcatc atgctggttg gctccttaat tctcatgggg
      661 ttcgcatttg ctgaagtcgg aggctacgag agctttacag agaagtacat gaatgccatc
      721 ccctctgtgg tggaggggga taacctgacc atcagcccca agtgctacac ccctcagccc
      781 gactccttcc acatcttccg agatcctatc aatggagaca tcccgtggcc tggactgata
      841 tttggaatga ccattttagc tatctggtac tggtgtgcag accaggtcat ggtacagcgc
      901 tgcttatgtg gcaagaacat gtcccacgtg aaggctgcct gcatcatgtg tggctacctg
      961 aagctgctgc ctatgttcct catggtgatg ccggggatga tcagccgtat tctgtacaca
     1021 gataaggtgg cctgtgtcgt accttctgag tgcgtgaaac agtgtggcac ggccgtcggc
     1081 tgcactaact atgcctaccc caccctggtg ctggagctga tgcctgatgg actgcgaggc
     1141 ctgatgctgt cggtcatgtt ggcttctctc atgagctccc tgacctccat cttcaacagc
     1201 gccagcaccc tcttcaccat ggacctctac accaagataa ggaagaaggc atcggagaga
     1261 gagctcatgg tagccggacg ggtatttggc atcgtcctaa tcgtcatcag catcctgtgg
     1321 gtcccgctga tacaggcgtc acagaacgga cagctcttcc actacatctc ctcgttttct
     1381 agttacatcg ggcctcctgt tggcgctgtg ttcttgcttg ccatcttctg caagagggtc
     1441 aatgaacagg gagccttctg ggggctaatg gtcggactcg tgataggcct tattcgtatg
     1501 atcactgagt ttatatacgg aacgggcagc tgcctggagc ccagtaactg tcccaggata
     1561 atctgtggag ttcactatat gtatttcgcc attattctct tctttgtgtc catattggta
     1621 atcctgggag tctccttcct aacggagcca attcctgatg tccacctata ccgcctgtgc
     1681 tggagtcttt ggaacaacac agaggaacgg attgacttag atgcagaaca ggaaactcgt
     1741 gaagaagttg gtggtgctct tgaagaagac gatgccgagc aatcccgtgg atgtcttcgg
     1801 agggcgtgca gcttattctg cggtttgcag agtacggggc ccaagctgac cgaagaagag
     1861 gaggcagctc tgaggcagaa attctcagac acctctgaga agcccctgtg gagaaatgta
     1921 gtgaacatca acgccatcct cctcctggct gtggctgtct ttgtccacgc ctactttgcc
     1981 tgaaccctca atgaagcaga gagtgcttct ctcgagtttc cctttataaa gttggttgtg
     2041 tggcgaagat aaatggccaa ctggaaatgt tgtataatta gatttctcga ttttgtcacg
     2101 cctctgtgac tagtttaaga actctttttt ctccccagct ctatttagat gtaaatggca
     2161 gtgtatatat ttttaagatg tacaccatgg tgatttgatg tgtacacact ttgaaatgac
     2221 tgttgtgatc agtttcatag actcatcatc tgatttggtc atcctatcgc ttctcggcct
     2281 tttggctaag atcaagtgta gtatctgatt tggtcatcct tcgtgtgttt atggcggcaa
     2341 tatccaagat gcgcccacct agtaaatttc aggtacacag cagatatttt aaagggtagt
     2401 ctccgtaatt tacatggatt ctcttttttt aatattattt atttaatgta tatgagtaca
     2461 ctgtagctgt cttcagacac agcagaagag ggcatcagat cccattacag atggttgtga
     2521 gccaccatgt ggttgctggg aattgaactc aggacctctg gagagcagtc agtgctctta
     2581 accgctgagc catctctcca gccccaaaat tcttttcttt aatccaaaat tgtatgccct
     2641 ttgatcaaca tgtgtttcaa aacgtacaat gtatggaagc tcagtattcc ttagatacta
     2701 tgtggcatcc caatgaatga gcatcaaggg gctgcaaagc acataacgtt tctcctcatc
     2761 aattgtttct gtggagcaag cttccttttg tatctatatt tccaagtatt tgtgatgcac
     2821 ttgtatgttt gtcttgtgta tattctgcct ccctgaaaag ggactataaa tatg
//
