LOCUS       NM_001100482            2069 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus solute carrier family 5 member 11 (Slc5a11),
            mRNA.
ACCESSION   NM_001100482 XM_001079626 XM_574554
VERSION     NM_001100482.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Aouameur,R., Da Cal,S., Bissonnette,P., Coady,M.J. and
            Lapointe,J.Y.
  TITLE     SMIT2 mediates all myo-inositol uptake in apical membranes of rat
            small intestine
  JOURNAL   Am J Physiol Gastrointest Liver Physiol 293 (6), G1300-G1307 (2007)
   PUBMED   17932225
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1 and U47673.1.
            
            On Sep 23, 2014 this sequence version replaced NM_001100482.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643288.4234.1,
                                           SRR26360194.315766.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-135               JAXUCZ010000001.1  187187684-187187818
            136-207             JAXUCZ010000001.1  187191259-187191330
            208-312             JAXUCZ010000001.1  187192420-187192524
            313-372             JAXUCZ010000001.1  187193834-187193893
            373-424             JAXUCZ010000001.1  187200610-187200661
            425-494             U47673.1           215-284
            495-583             JAXUCZ010000001.1  187202043-187202131
            584-664             JAXUCZ010000001.1  187205822-187205902
            665-870             JAXUCZ010000001.1  187212111-187212316
            871-1006            JAXUCZ010000001.1  187213941-187214076
            1007-1114           JAXUCZ010000001.1  187218439-187218546
            1115-1265           JAXUCZ010000001.1  187218834-187218984
            1266-1434           JAXUCZ010000001.1  187221138-187221306
            1435-1650           JAXUCZ010000001.1  187222512-187222727
            1651-1819           JAXUCZ010000001.1  187223308-187223476
            1820-2069           JAXUCZ010000001.1  187226042-187226291
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q36"
     gene            1..2069
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /note="solute carrier family 5 member 11"
                     /db_xref="GeneID:252854"
                     /db_xref="RGD:621410"
     CDS             1..2022
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /note="na+/myo-inositol cotransporter 2; sodium/glucose
                     cotransporter KST1; sodium-dependent glucose
                     cotransporter; Na(+)/myo-inositol cotransporter 2;
                     sodium-cotransporter rkST1; sodium/myo-inositol
                     transporter 2; solute carrier family 5 (sodium/inositol
                     cotransporter), member 11; solute carrier family 5
                     (sodium/glucose cotransporter), member 11"
                     /codon_start=1
                     /product="sodium/myo-inositol cotransporter 2"
                     /protein_id="NP_001093952.2"
                     /db_xref="GeneID:252854"
                     /db_xref="RGD:621410"
                     /translation="MESTTSSPQPPPSDALEAFPQKSMEPADIVVLVLYFLFVLAVGL
                     WSTVRTKRDTVKGYFLAGGDMVWWPVGASLFASNVGSGHFIGLAGSGAAVGISVAAYE
                     LNGLFSVLMLAWIFLPIYIAGQVTTMPEYLRRRFGGSRIPITLAVLYLFIYIFTKISV
                     DMYAGAIFIQQSLHLDLYLAIVGLLAVTALYTVAGGLAAVIYTDALQTVIMLIGAFIL
                     MGYSFAAVGGMEGLKDQYFLALASNRSENSSCGLPREDAFHIFRDPLTSDLPWPGILF
                     GMSIPSLWYWCTDQVIVQRSLAAKNLSHAKGGSLMAAYLKVLPLFLMVFPGMVSRILF
                     PDQVACAHPDICQRVCSNPSGCSDIAYPKLVLELLPTGLRGLMMAVMVAALMSSLTSI
                     FNSASTIFTMDLWHHIRPRASERELMIVGRVFVLALVLVSILWIPVVQASQGGQLFIY
                     IQSISSYLQPPVAVVFIMGCFWKRTNEKGAFSGLILGLLLGLVRLILDFVYVQPRCDQ
                     PDDRPAVVKDVHYLYFSMILSSTTLITVFTVSWFTETPSKEMVSRLTWFTRHEPVAQK
                     DSVPPENPLSLTISQNGTTEATGISIQLESVQEATTKAHSDGVSPKQSKVLKAILWLC
                     GMEKDKEEPPSKVEPVIVSLEENPLVKTLLDVNCIVCISCAIFLWGYFA"
     exon            1..135
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            136..207
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            208..312
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            313..372
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            373..477
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            478..583
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            584..664
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            665..870
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            871..1006
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            1007..1114
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            1115..1265
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            1266..1434
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            1435..1650
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            1651..1819
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
     exon            1820..2069
                     /gene="Slc5a11"
                     /gene_synonym="Kst1; SMIT2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagagta ccacctccag ccctcagcct ccaccatctg atgccctgga ggcctttccc
       61 cagaagagca tggagcctgc ggacattgtt gtcttggttc tgtacttcct ctttgtcctg
      121 gctgttggat tatggtccac ggtgaggacc aaacgagaca cagtgaaagg ctacttcctg
      181 gctggaggtg acatggtgtg gtggccagtg ggtgcatcct tgtttgccag caatgttgga
      241 agtggacact tcattggcct agcagggtct ggtgctgctg tgggcatttc tgttgctgcc
      301 tatgagctta atggcttgtt ttctgtgctg atgctggcct ggatcttcct tcctatctac
      361 atcgctggcc aggtaaccac gatgccagaa tacctaaggc gacgcttcgg gggcagcagg
      421 atccccatca ccctggctgt gctctacttg ttcatctaca tcttcaccaa gatctcggtg
      481 gacatgtatg caggggccat cttcattcag cagtccttgc acctggatct gtacctggcc
      541 atagttgggc tgctggcagt cacagctctg tacactgttg caggaggtct ggctgctgtt
      601 atctacacag acgctctgca gactgttatc atgcttatag gagccttcat cctgatgggc
      661 tacagctttg cagctgtagg tgggatggaa ggcctgaagg accagtactt cttagccctg
      721 gctagtaacc ggagtgagaa cagcagctgt ggcctacccc gagaagatgc cttccacatc
      781 ttccgcgatc cattgacatc tgatctcccc tggcccggga tcctgttcgg aatgtccatc
      841 ccgtctcttt ggtactggtg tacagatcag gtgattgttc agcggagtct ggctgccaag
      901 aacctgtctc atgccaaagg cggctccctg atggccgcat acctgaaagt gcttcctctt
      961 ttcctaatgg tgttccctgg tatggtgagc agaatcctct ttccagatca agtagcctgt
     1021 gcgcatcccg acatctgcca gagagtctgt agcaacccct ctggctgttc agacatcgca
     1081 tatcccaaac ttgtgctgga acttttgccc acaggactcc gtgggctcat gatggctgtg
     1141 atggtggcgg ctctcatgtc ctccctcacg tccatcttta acagtgccag caccatcttc
     1201 accatggacc tgtggcacca catccggcca cgggcatctg aaagggagct catgattgtg
     1261 ggcagggtgt ttgtgttagc actggtgctg gtctccatcc tctggatccc cgttgtgcag
     1321 gccagccagg gaggtcaact tttcatctac atccagtcta tcagctctta cctgcagcca
     1381 cctgtggccg tggtctttat tatgggatgt ttctggaagc gaaccaatga gaagggtgcc
     1441 ttctcaggcc tgatcttggg cttgctgcta ggattggtca ggctgatcct ggactttgtc
     1501 tacgtgcagc ctcggtgtga ccagcccgat gaccgtccag ctgtggtgaa ggacgtccac
     1561 tacctctact tctccatgat tctgtcgtct accaccctca tcacggtgtt cactgtgagc
     1621 tggttcacag agacaccctc caaagagatg gtcagccgcc tgacttggtt tactcgtcat
     1681 gagcctgtgg cccagaagga ctcagttcca ccagaaaacc ccctgtctct aaccatttct
     1741 cagaatggga ctacagaggc cacaggcatc agcatccagt tggagtcagt tcaagaagct
     1801 acgaccaaag cccacagtga cggcgtgtcc cccaaacagt ccaaggtgct gaaggccatc
     1861 ctgtggctct gtgggatgga aaaggacaag gaggagcccc caagcaaagt ggagcctgtc
     1921 atagtttcct tggaggaaaa tcccttggtg aaaaccctgc tagacgtcaa ctgcattgtg
     1981 tgcatcagct gcgccatctt cctctgggga tactttgcgt aactcagggt gagccaggaa
     2041 acgataataa agctgtgtgt ttaccttca
//
