LOCUS       NM_001106709            2391 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus solute carrier family 4 member 1 adaptor protein
            (Slc4a1ap), mRNA.
ACCESSION   NM_001106709 XM_001067937 XM_233883
VERSION     NM_001106709.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On May 30, 2012 this sequence version replaced NM_001106709.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760389
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-663               JAXUCZ010000006.1  30652931-30653593   c
            664-859             JAXUCZ010000006.1  30652072-30652267   c
            860-982             JAXUCZ010000006.1  30649584-30649706   c
            983-1043            JAXUCZ010000006.1  30646684-30646744   c
            1044-1183           JAXUCZ010000006.1  30646173-30646312   c
            1184-1344           JAXUCZ010000006.1  30644287-30644447   c
            1345-1414           JAXUCZ010000006.1  30643587-30643656   c
            1415-1601           JAXUCZ010000006.1  30642429-30642615   c
            1602-1713           JAXUCZ010000006.1  30638166-30638277   c
            1714-1951           JAXUCZ010000006.1  30634603-30634840   c
            1952-2019           JAXUCZ010000006.1  30630778-30630845   c
            2020-2089           JAXUCZ010000006.1  30628752-30628821   c
            2090-2391           JAXUCZ010000006.1  30625931-30626232   c
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q14"
     gene            1..2391
                     /gene="Slc4a1ap"
                     /note="solute carrier family 4 member 1 adaptor protein"
                     /db_xref="GeneID:298805"
                     /db_xref="RGD:1307080"
     CDS             1..2139
                     /gene="Slc4a1ap"
                     /note="solute carrier family 4 (anion exchanger), member
                     1, adaptor protein"
                     /codon_start=1
                     /product="kanadaptin"
                     /protein_id="NP_001100179.2"
                     /db_xref="GeneID:298805"
                     /db_xref="RGD:1307080"
                     /translation="MADATSQLEAPAPQDVSSEFKKPVLPVPPAVRSKAPASSPSVPE
                     DVKKECSTAQLDSGCGEPEVSPPQPDSEETGGPPVEQLRSPRVAPASGGPTRAPPYQE
                     PSWGSPATAPYSLETLKGGTILGTRTLKDTSYCLFGRLASCDICLEHPSVSRYHAVLQ
                     HRGSDPSGDSEDQGQGFYLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVIRFGGSTRLF
                     ILQGPEEDREAESELTVTQLKELRKQQQALLEKKMLGEDSDEEDEADTTAGKRNTSGQ
                     DEEMGCTWGMGEDAVEDEAEENPIALEFQQDREAFYIKDPKKALQGFFDREGEELEYE
                     FDEQGHSTWLCRVRLPVDDSTGKQLVAEAIHSGKKKEAMIQCSLEACRILDTLGLLRQ
                     EAVSRKRKAKNWEDEDFYDSDDDTFLDRTGLVEKKRLNRMKKAGKIDEKPETFESLVA
                     KLNDAERELSEISERLKASSKVQSESSSQDSLDAFMSEMKSGSTLDGVSRKKLHLRTF
                     ELRKEQQRLKGLIKLVKPAEIPELKKTELQTTNAENKTKKLALPLFGAMKGGSKFKLK
                     TGTVGKLPPKRPELPPALMQMKDEPEVEEEEEEEEEEKAKEEHEEGVEDGGVRLSQGP
                     EPEPEAAGEHPGAPPEPSCSKETKSHAAPENECKKDRDELKKKKSGPGKFPPILSSKY
                     PEDDPDYCVWVPPEGQSGDGRTHLNDKYGY"
     exon            1..663
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            664..859
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            860..982
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            983..1043
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            1044..1183
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            1184..1344
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            1345..1414
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            1415..1601
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            1602..1713
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            1714..1951
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            1952..2019
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            2020..2089
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
     exon            2090..2391
                     /gene="Slc4a1ap"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggctgatg ctacctctca gttagaagcg ccagcacctc aggatgttag tagcgagttt
       61 aagaagcctg ttttgccggt gcctcccgca gtgcggagta aggctccggc ctccagtcca
      121 tcagttcctg aagatgtgaa gaaggaatgt agcacggcgc agctagactc tggatgtggg
      181 gagcccgagg tctcgccacc gcagccggac agcgaggaga ctgggggtcc accggtggaa
      241 cagctccgct ctccgagggt agctcctgct tctggcggtc cgacccgggc tcccccgtac
      301 caagagccat cgtggggcag cccagccacg gccccttaca gtctcgaaac cctgaagggt
      361 ggcaccatcc ttggtacacg caccttgaaa gacacgagct actgcctttt cgggaggctt
      421 gctagctgtg acatatgcct ggagcatcct tccgtgtctc ggtaccatgc tgtactacag
      481 caccgggggt cggatcccag cggagactct gaggatcagg ggcagggctt ttatctctat
      541 gatctgggaa gtacccacgg cactttcctc aacaaaactc gcatcccacc ccgcacttac
      601 tgtagagtcc atgtcgggca cgttattcgc tttggaggca gcactcggct ctttatcctt
      661 cagggaccag aggaagaccg agaggcagaa tctgaattaa cagtaacaca gttgaaggaa
      721 cttcgcaaac agcagcaggc gttattggag aagaagatgt taggtgaaga ttcagatgaa
      781 gaagatgaag cagataccac tgcagggaag agaaatacaa gtggtcaaga tgaggagatg
      841 ggttgcacgt ggggaatggg agaagatgct gtagaggatg aggccgagga gaaccccatt
      901 gccttggagt ttcagcagga ccgggaggcg ttttatataa aggatccgaa gaaggctctt
      961 caaggcttct ttgacagaga aggagaagag ttggaatatg aatttgatga gcagggacat
     1021 agcacttggc tctgcagggt gaggttaccg gtagatgatt caactgggaa acagctggtg
     1081 gctgaggcca ttcactcagg aaagaaaaaa gaagcaatga tacagtgctc actggaagct
     1141 tgtcggatcc ttgatacctt gggcttgcta cggcaggaag cagtatctcg gaaaaggaaa
     1201 gccaagaact gggaagatga ggatttttat gacagtgatg atgatacatt cctcgatcgg
     1261 accggcctgg tcgagaagaa gcgcttgaac cggatgaaga aggctggcaa gattgatgag
     1321 aagccagaaa cttttgagtc actggttgca aaactaaatg atgccgaaag ggaactctct
     1381 gagatttctg aaaggctcaa ggcatcaagc aaagttcagt cagaatcatc gtctcaggat
     1441 tctttagatg cgttcatgtc agaaatgaaa tcagggagca cgttagatgg ggtgtcccgg
     1501 aagaaacttc atctgaggac ttttgaacta cggaaagaac aacagagact gaaagggtta
     1561 ataaaacttg taaagccagc agagatccca gaactaaaga aaactgaact tcagactaca
     1621 aatgcagaaa acaaaactaa gaaacttgca ctgcctctct ttggtgccat gaaaggagga
     1681 agcaaattca aattaaaaac tggaacagta gggaagttgc cacccaagcg tcctgaactc
     1741 cctccagctt taatgcaaat gaaggatgaa cctgaagtag aggaggagga ggaagaggaa
     1801 gaggaggaga aagcaaagga ggagcatgaa gaaggagtgg aggacggagg tgtcaggctg
     1861 tctcaggggc cggagccaga gccggaagca gccggggagc acccgggtgc tcccccagag
     1921 ccctcgtgct ccaaggagac aaagagccat gcagcaccag agaatgaatg taaaaaagac
     1981 agagatgagt tgaagaaaaa gaaatctggg ccagggaaat ttccacccat actttcttcc
     2041 aaatatcctg aggatgaccc agactactgc gtatgggtcc cacctgaagg tcaaagtgga
     2101 gatggcagaa cgcatcttaa tgacaagtat ggctattgat tggttcagag tcccagagga
     2161 agaccttgtg ggccacagga tgtctgggag aaggcatcaa gtctgacccg ggaagttcag
     2221 acggccattt gtaaaatctg gtgactggct ttttcttctg tacccctgac ttcctaaact
     2281 cacctgccca ttggattctc ctggatttca gtgtttatat ttaagtgtct gtgtatatat
     2341 gtaaaaaaga accatgcaca ctgagaataa agtaagagac atgacccatg a
//
