LOCUS       NM_001012017            2701 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus solute carrier family 49 member 4 (Slc49a4),
            mRNA.
ACCESSION   NM_001012017 XM_221400
VERSION     NM_001012017.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2701)
  AUTHORS   Bodmer,D., Eleveld,M., Kater-Baats,E., Janssen,I., Janssen,B.,
            Weterman,M., Schoenmakers,E., Nickerson,M., Linehan,M., Zbar,B. and
            van Kessel,A.G.
  TITLE     Disruption of a novel MFS transporter gene, DIRC2, by a familial
            renal cell carcinoma-associated t(2;3)(q35;q21)
  JOURNAL   Hum Mol Genet 11 (6), 641-649 (2002)
   PUBMED   11912179
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC081960.1.
            
            On Feb 11, 2005 this sequence version replaced XM_221400.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC081960.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2701
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q22"
     gene            1..2701
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /note="solute carrier family 49 member 4"
                     /db_xref="GeneID:303902"
                     /db_xref="RGD:1310939"
     exon            1..601
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /inference="alignment:Splign:2.1.0"
     CDS             259..1695
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /note="disrupted in renal carcinoma protein 2 homolog;
                     disrupted in renal carcinoma 2 homolog"
                     /codon_start=1
                     /product="solute carrier family 49 member 4"
                     /protein_id="NP_001012017.1"
                     /db_xref="GeneID:303902"
                     /db_xref="RGD:1310939"
                     /translation="MGSGWSSEEEERQPLLGPGLGPAPGATRRGREAAAVLPAAGPSP
                     GRVYGRRWLVLLLFSLLAFAQGLVWNTWGPIQNSARQAYSFTGWDIALLVLWGPIGFL
                     PCFAFMWLLDKRGLRITVLLTSFLMVLGTGLRCIPVSDLTLKKRLIHGGQILNGLAGP
                     TVMNAAPFLSTTWFSADERATATAIASMLSYLGGACAFLVGPLVVPAPNGTAPLLTAE
                     SSRDHIKDRIETVLYAEFGVVCLIFSATLAYFPPRPPLPPSVAAASQRLSYRRSFCRL
                     LSNLRFLMIALAYAIPLGVFAGWSGVLDLILTPVHVSQVDAGWIGFWSIVGGCVVGIA
                     MARFADFIRGMLKLILLLLFSGATLSSTWFTLTCLNSVTHLPLTTVTLYASCILLGVF
                     LNSSVPIFFELFVETVYPVPEGITCGVVTFLSNMFMGVLLFFVTFYHTELSWFNWCLP
                     GSCLLSLLLILCFRESYDRLYLDVVVSV"
     exon            602..695
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /inference="alignment:Splign:2.1.0"
     exon            696..961
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /inference="alignment:Splign:2.1.0"
     exon            962..1091
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1092..1200
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1201..1268
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1269..1396
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1397..1579
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1580..2673
                     /gene="Slc49a4"
                     /gene_synonym="Dirc2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccagccggc cgcgatcttc taccctttcc acccgtaggg tctccggctt ctctgcgggg
       61 aacgttcctg agctcccagc aagcagggtg gaccccgcct cgcctcctcc cctcgggctc
      121 gggcggcgca ggcgcagcag acgcgcccgg gaggccgagg actagagcgg ctccagctcc
      181 cgctccaccc gcccagtcag ctcccggctg gtctgaggcc accgggacgc gtcgggcagg
      241 gcagcgggcg gcgtcgccat gggctcgggt tggagcagcg aggaagagga gcggcagccg
      301 ctgctggggc cgggactcgg gcctgcgccg ggggctacgc gcaggggccg ggaggcggcg
      361 gctgtgctgc ccgcggcggg cccgagcccc gggagggtgt atgggcgccg ctggctggtg
      421 ctgcttctct tctcgctcct ggcgttcgca cagggcctgg tctggaatac ctggggcccc
      481 atccagaact cggcgcgcca ggcctatagc ttcaccggat gggacatcgc gctcctggtc
      541 ctgtgggggc ccataggctt cctgccctgc ttcgcgttca tgtggctgct ggacaagaga
      601 ggtctgcgca tcactgtgct cctgacgtcc tttctcatgg tcttgggcac tggtctaagg
      661 tgcataccgg tatcagactt aacccttaaa aaacgattaa tccatggggg gcagatacta
      721 aacggactgg caggtccgac tgtcatgaat gcagcgccgt tcctctccac cacctggttc
      781 tctgctgacg agcgagccac tgccaccgcg atcgcttcga tgctgagcta tctcggtgga
      841 gcatgcgcgt tcctcgtcgg gcccctggtg gttccggcgc ccaatgggac agcaccgctc
      901 ctcactgcgg agagtagcag ggatcatatc aaagaccgaa tcgagactgt gctatacgca
      961 gaatttggag ttgtctgcct aatattctct gccacgctcg cttatttccc gcctcggcct
     1021 ccgcttcctc ccagcgttgc tgctgccagc cagcggctga gttaccggag gagcttttgt
     1081 aggttactaa gcaatttgag gtttttgatg attgctttag catacgcaat accactgggt
     1141 gtgtttgctg gctggtctgg agttctggac ttgattttaa caccagtgca tgttagtcaa
     1201 gtagatgctg gctggattgg attttggtcc atagttggag gctgtgttgt tggaatagct
     1261 atggcaaggt ttgcagattt tatccggggt atgctgaaac taattcttct cctcctgttt
     1321 tctggggcta cgctgtcatc cacgtggttc accctgacct gtctgaacag cgtcacccac
     1381 ttgcctttga caacagtgac actgtatgcc tcctgcatcc tcctgggagt cttcttgaac
     1441 agcagcgttc ctatattctt tgagcttttt gtggaaactg tctaccccgt gccagaaggg
     1501 attacctgtg gagttgtcac tttcttaagt aatatgttca tgggagtgct tttatttttt
     1561 gtcacatttt atcatacaga gttgtcttgg ttcaactggt gccttcccgg gtcgtgtctg
     1621 ctcagtcttc ttctcattct gtgcttcagg gaatcctatg acaggctgta ccttgatgtg
     1681 gtcgtctcgg tctgaggcca cagactggtg ggactttaaa gggacctcag tactgcacct
     1741 ttgcttggac tcgcacatgc gctgggagaa aaggtgaaga aaggattctc tcagaggttc
     1801 tgttaagtga cagagtctca cgttaattta atgactacta ggtaataata atgcaggact
     1861 cggtgtcacg aactcgagga ctcgtggaca gcacacgcgt gctagtggct ctggggtgga
     1921 ggtgcgatgg ctcacacagg atgcgctgcc ccgtaagtca tgcccgtgtg cattgcacct
     1981 gtgctaactg atgagctgaa ctgccgcagg aagcatgggc gtcagccctc tgaagaggac
     2041 tcctcccagg cacacaacag gaatggagtc accactaact tctgaagaca tcagacccct
     2101 gtcagatttt aattacaaaa tagccggggt gtaccccggt gatagaagtt agcccgtgta
     2161 cactacatgt ttttctaata aacccgtttc ttatacgact cctcattttt aatctggttg
     2221 gaagcctctg gctgtccttt gcacaggccc tggctccttc ccatccaccc gtttctgtga
     2281 gtatagtcag tcacgccagc aaggtgagta aatgcccgat agggtgccat taactgttgt
     2341 gtggaaagca taactctgtt agggtttagc actttgttaa aaatgaaagc cacatggagc
     2401 atgtgtgtct ccagtacatg tgctggcaca agtgtgaagt ccagcgccca ctgtaactta
     2461 ccaggttaga ttgtagtcaa acgacccccc atttgaaaag aacaatgtat aactctgaag
     2521 gtttgaagat ctgtgtgtga tttctgaact gtacccgtgt atttaattta gattgtaaca
     2581 tactcgattc taaatgaagt cattgtattt gattggacag atttttgcca ataactattt
     2641 ctttctataa ataatggatt tttacaaaac acaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2701 a
//
