LOCUS       NM_001135868            3254 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus solute carrier family 45, member 3 (Slc45a3),
            mRNA.
ACCESSION   NM_001135868 XM_222629
VERSION     NM_001135868.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Bartolke,R., Heinisch,J.J., Wieczorek,H. and Vitavska,O.
  TITLE     Proton-associated sucrose transport of mammalian solute carrier
            family 45: an analysis in Saccharomyces cerevisiae
  JOURNAL   Biochem J 464 (2), 193-201 (2014)
   PUBMED   25164149
REFERENCE   2  (bases 1 to 3254)
  AUTHORS   Shin,D., Howng,S.Y., Ptacek,L.J. and Fu,Y.H.
  TITLE     miR-32 and its target SLC45A3 regulate the lipid metabolism of
            oligodendrocytes and myelin
  JOURNAL   Neuroscience 213, 29-37 (2012)
   PUBMED   22521588
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000013.1.
            
            [WARNING] On May 3, 2024 this sequence was replaced by
            NM_001135868.2.
            
            On Oct 16, 2008 this sequence version replaced XM_222629.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.1423601.1,
                                           SRR26360172.1312815.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on conservation,
                                                expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-115               JAXUCZ010000013.1  45959467-45959581
            116-510             JAXUCZ010000013.1  45973374-45973768
            511-1296            JAXUCZ010000013.1  45974409-45975194
            1297-1562           JAXUCZ010000013.1  45975715-45975980
            1563-3254           JAXUCZ010000013.1  45978072-45979763
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q13"
     gene            1..3254
                     /gene="Slc45a3"
                     /gene_synonym="RGD1309764"
                     /note="solute carrier family 45, member 3"
                     /db_xref="GeneID:304785"
                     /db_xref="RGD:1309764"
     exon            1..115
                     /gene="Slc45a3"
                     /gene_synonym="RGD1309764"
                     /inference="alignment:Splign:2.1.0"
     exon            116..510
                     /gene="Slc45a3"
                     /gene_synonym="RGD1309764"
                     /inference="alignment:Splign:2.1.0"
     CDS             339..2000
                     /gene="Slc45a3"
                     /gene_synonym="RGD1309764"
                     /codon_start=1
                     /product="solute carrier family 45 member 3"
                     /protein_id="NP_001129340.1"
                     /db_xref="GeneID:304785"
                     /db_xref="RGD:1309764"
                     /translation="MIQRLWASRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLL
                     EVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVLLSLFL
                     IPRAGWLAGLLCSDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRQA
                     FSVYAFMISLGGCLGYLLPAIDWDTSALAPYLGTQEECLFGLLTLIFLICVAATLLVA
                     EEAVLGPPEPAEGLLVSSVSRRCCSCHAGLAFRNLGTLFPRLHQLCCRMPRTLRRLFV
                     AELCSWMALMTFTLFYTDFVGEGLYQGVPRAEPGTEARRHYDEGIRMGSLGLFLQCAI
                     SLFFSLVMDRLVQKFGTRSVYLASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSAL
                     QILPYTLASLYHREKQVFLPKYRGDAGGGSSEDSQTTSFLLGPKPGAPFPNGHVGPGG
                     SSILVPPPALCGASACDVSMRVVVGEPPEAKVVTGRGICLDLAILDSAFLLSQVAPSL
                     FMGSIVQLSHSVTAYMVSAAGLGLVAIYFATQVVFDKNDLAKYSL"
     exon            511..1296
                     /gene="Slc45a3"
                     /gene_synonym="RGD1309764"
                     /inference="alignment:Splign:2.1.0"
     exon            1297..1562
                     /gene="Slc45a3"
                     /gene_synonym="RGD1309764"
                     /inference="alignment:Splign:2.1.0"
     exon            1563..3254
                     /gene="Slc45a3"
                     /gene_synonym="RGD1309764"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttcccccca ctgagtaacc tggagattta aaagctgccc gctggcgcgc gttggggaag
       61 caggggtccg ggctcgcacg cgccagcccc aggtgacagc cgcgcgccgg gccagggtcc
      121 gactgacgag atgtgtcccc atcaagcaag gcactagatg gtgacgtgtt cagtgtggga
      181 tgagatgccg aagtggtact caagggctgg ccgaaatggg agcctggctg caccctcgga
      241 ggttggtgct agcaaggagg agaagccgcg gcagggctga ctcaaaacag ctgtggagtg
      301 tgtgaatggc ccccggaccc ctaaccgccc tgtccatcat gatccagagg ctgtgggcca
      361 gccgtctgct aaggcatcgg aaagcccagc tcctgctggt caacctgcta accttcggcc
      421 tggaggtgtg cctggctgct ggcattacct atgtgccacc ccttctgctg gaagtcgggg
      481 tagaggaaaa gttcatgacc atggtgttgg gcattggccc agtgctgggc ctggtttctg
      541 ttccactcct aggctcagcc agtgaccagt ggcgtgggcg ctatggccgc cggagaccct
      601 ttatctgggc tctgtccctg ggtgtcctgc taagcctctt cctcatcccg agggccggct
      661 ggctggcagg gctactgtgt tcagatacta ggcccctgga gttggccctg ctcatcttgg
      721 gagtggggct gctggacttt tgcggccagg tgtgctttac tccactggag gccttactct
      781 ccgacctctt ccgggaccca gaccactgcc gccaagcctt ctctgtctat gccttcatga
      841 tcagcctcgg gggctgcctg ggctacctct tacctgccat tgactgggac accagcgccc
      901 tggcccccta cctaggcact caggaagaat gcctcttcgg cctcctcacc ctcatttttc
      961 tcatctgtgt ggcagccact ctgcttgtgg ctgaggaggc agtccttggc ccacccgagc
     1021 cagcagaagg gttgttggtc tcctccgtgt cacgccggtg ctgctcatgc catgctggcc
     1081 tggctttccg gaatctgggt accctgtttc cccggctgca ccagctgtgc tgccgaatgc
     1141 ctcgcaccct gcgccggctc tttgtggccg agctgtgcag ctggatggca cttatgactt
     1201 tcacactgtt ctacacggac ttcgtgggag aggggctgta ccagggtgtc cccagagcag
     1261 agccaggtac cgaggcccgg agacactatg atgaaggcat tcgaatgggc agcctggggc
     1321 tcttcctgca gtgtgccatc tccctgttct tctccctggt catggacagg ctggtacaga
     1381 agttcggcac acggtcagtc tacctggcca gtgtgatgac ctttcccgtg gctgccgctg
     1441 ccacgtgcct gtcccacagc gtggttgtag tgacagcctc agctgccctc accgggttca
     1501 ccttctcagc cttgcagatc ctgccttaca cgctcgcctc cctctaccat cgagagaagc
     1561 aggtgttcct gcccaaatac cgaggggacg ctggaggtgg tagcagtgaa gacagccaaa
     1621 caaccagctt cttgctaggc cctaagccag gagctccctt ccccaatgga cacgtgggcc
     1681 ctggcggcag cagcatcctg gtgcccccac ctgcactctg tggggcctct gcctgtgatg
     1741 tctccatgcg agtggtagtg ggtgagccac ctgaagccaa ggttgttact ggacggggca
     1801 tttgcctgga ccttgccatc ctggacagtg cctttctgct gtcccaggtg gctccgtccc
     1861 tgttcatggg ctccattgtc cagctgagcc actctgtcac tgcctatatg gtatcagctg
     1921 caggcttggg tctggtcgcc atttactttg ctacacaggt agtgtttgac aagaatgact
     1981 tggccaaata ctcactgtag aattctgtaa ggcatcaaag aagaggatct gcctccccgg
     2041 ttctcagccc cagagggctg cagagctggt ctctttccgg tctctgttgc cctgagtggc
     2101 tctccactgc catccgaagg cagtgaggtg tatggctgca caggttggag cttttggctc
     2161 tggcttcaga gtctgcctgg cctcctggcg gcttcccact tgggtctgaa gttctgcagg
     2221 gatgcaaatg cagtctgtat aggtgcttta tcaaggctcc aagtgaacgg ctaacctcct
     2281 gcttgagtca ccagaggaag ggcatggggg gcccgaatga acttcccctt caagtccctt
     2341 gtccagttcc tgccgctgtg gctcttgcat gagcgtttcc tccatggggc tctacgccct
     2401 ccacgggcct ccacggggct tcacggggcg gaagttggaa ggaccctagt gggcaagatg
     2461 aagcctcgcg atccacagcg ctgcctttct gctgagcccc ccacccccac tcatttcagg
     2521 aaatggctcg gcttgtcggc ccttgcattg acacgggcct ttaaatattt aacttattta
     2581 ttaacgaata agaaggaaat tcatacccag cctttttaac gttgtgccta ggagttgagt
     2641 agggtgggat cccccaaaac tggttccccc gaaatagttg gtcactgtgc tagatattgc
     2701 cagactcctc ttccggggtg atagatgtgg tcccccaaac cgcccagtac cttgggcaat
     2761 ctattcttcc cgattgagag ccataagatg ccccgactca agactggcca ttgagggaaa
     2821 gtggaatggg acccaaggtc tcctcagcct tctaaaaccc aattttctct tgacctaatt
     2881 ggttccctga ttgctcgctg ctccctatgg gaatggacca tgaagagatt gcccttccaa
     2941 gtctagccac tggcttcagg acctctctgt ggggcttgtt gaaccctaag cacaaatgtg
     3001 tttccttagg cctctgccca tctcagcctc tggggcaaat ctgtcacagc ctggggaaat
     3061 ctcacacaaa ctcaggagta ctccccgcca gagccagtga gctcatcgtg tctggggggg
     3121 agttcagtgc tgattgcaat aatgttatct atgtcttatt tatttagcag agtaaatatt
     3181 ttataccgta tgtgataaat cagagtataa tgtttatggt aatgaaatta aaagcttcgt
     3241 atatgtttac ttga
//
