LOCUS       NM_001134594            2014 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus solute carrier family 44, member 5 (Slc44a5),
            mRNA.
ACCESSION   NM_001134594 XM_001080116 XM_345302
VERSION     NM_001134594.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473952.1.
            
            On or before Sep 4, 2008 this sequence version replaced
            XM_345302.3, XM_001080116.1.
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q45"
     gene            1..2014
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /note="solute carrier family 44, member 5"
                     /db_xref="GeneID:365962"
                     /db_xref="RGD:1564620"
     exon            1..41
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            42..126
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     CDS             68..1960
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /codon_start=1
                     /product="choline transporter-like protein 5"
                     /protein_id="NP_001128066.1"
                     /db_xref="GeneID:365962"
                     /db_xref="RGD:1564620"
                     /translation="MAYPTDSQGQFCGQKGTPNENKTVLFYFNIFRCTGTSMMLRLQC
                     STTQICVSRCPERFLTYVDMQILNKEDKNYWEYYRQFCKAQARPVETLADLLSSGDCP
                     LAVYPSRPFLQRCVPDFSAINGNLTLGSRMHFEDGGGQKRTVVELREAASGISDVIDA
                     RAIGLKVLEDYSTSWKWILIGLTIAMALSWTFLVLLRFTAGFLFWFFIFGVLGIIGYG
                     IWYCFLEYNSIQQKPQSAIWMYGIGIQTRLNMFFHLKETWFSMMIILSAIEVVIIIVL
                     IFLRTRIQVAIILLKEGSKAIGYLPSALVYPFLTFILLSICISYWAVTAVFLATSGVP
                     IFKVMVPEGECIHEDEACDPEIFPNTDIPKACPGASCNFAFYGGRSMYHNYIATFQLY
                     NLFAFLWLINFVIALGQCALAGAFASYYWAMRKPEDIPRYPLFTAFGRAVRYHTGSLA
                     FGSLILAFVQMFKVIVEYLDRRLKKAQNSAAQFLHCCLRCCFWCLEKMVKFLNRNAYI
                     MIALYGKNFCESTRDAFYLLMRNILKVKVTDEVTYFVLLLGKVLVSGIVGVLAFLLFT
                     ERLHEIVEGPTSLNYYWVPFLVRTGDFSDWVIGFGNASVFPGVLKGLEVKIWRGMMGL
                     QRNLTL"
     exon            127..211
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            212..337
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            338..398
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            399..522
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            523..606
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            607..719
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            720..851
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            852..951
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            952..1044
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            1045..1132
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            1133..1395
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            1396..1490
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            1491..1594
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            1595..1668
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            1669..1739
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            1740..1909
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
     exon            1910..2014
                     /gene="Slc44a5"
                     /gene_synonym="RGD1564620"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggagttcta cggacgttat gtgctgtatg atcttcgtgc tcttgggtac atggtgaccc
       61 caggaaaatg gcctatccta cagacagcca gggacaattc tgtggccaga agggaacccc
      121 caatgagaac aagacagttc tgttttactt taacatattt agatgtaccg gcacatccat
      181 gatgcttcgc ctacagtgct ctactacaca gatctgcgtc tccaggtgcc cagagagatt
      241 cctgacctac gtggatatgc aaattttgaa caaagaagac aaaaactact gggaatacta
      301 tcggcagttc tgcaaggccc aggccaggcc tgtggagact ctcgcagatc ttctgtccag
      361 tggtgactgt cctctagcag tgtacccaag cagacctttt ctgcagaggt gtgtccctga
      421 cttttcagcc atcaatggta acttgacttt aggaagcagg atgcactttg aagatggagg
      481 tgggcagaag aggaccgtgg tagaactcag ggaggcggcg agtggcatta gtgacgtgat
      541 tgacgcccgg gcaattgggc tgaaggtgct tgaagactat tcgacatcgt ggaagtggat
      601 tctcatcggc ctgactattg ccatggcgct gagctggacg tttttggtac tcctgaggtt
      661 cacagctgga ttcctcttct ggttcttcat attcggtgtg cttggaatta taggatacgg
      721 aatatggtac tgttttctgg agtacaacag cattcagcag aaaccacagt ccgcgatctg
      781 gatgtacggc atcgggattc agacgaggct gaacatgttc tttcacttga aggagacctg
      841 gttttctatg atgatcatct tgtcagccat tgaagtcgtc atcatcattg tgctgatctt
      901 cctcagaact cggatccaag tggccattat cctgctaaag gaaggaagca aagccattgg
      961 ctaccttccc agtgcgttag tctacccatt tttaaccttc atcttgctat caatttgcat
     1021 ttcctactgg gctgtgacag ctgttttctt ggctacatca ggggtaccaa tattcaaagt
     1081 tatggtccca gagggggaat gtatacatga agatgaagct tgtgacccag agatttttcc
     1141 taacactgac atccccaaag cctgccccgg agcatcgtgt aactttgctt tctatggagg
     1201 aaggagcatg taccacaact acatcgcgac cttccagctc tacaacctct ttgccttcct
     1261 ttggctcata aactttgtca ttgccttggg tcagtgtgcc cttgctggtg cctttgcttc
     1321 atattactgg gccatgagaa aacctgaaga catcccgcgg taccccctct tcactgcgtt
     1381 tgggcgagca gtacgatacc acacggggtc tctagccttt ggatctttga tccttgcctt
     1441 cgttcagatg tttaaagtga tcgtagaata cctggacagg cgacttaaaa aggctcagaa
     1501 cagtgctgct cagttcctgc actgctgcct acggtgctgt ttctggtgtt tagaaaagat
     1561 ggtgaagttt ttaaacagaa atgcctacat catgattgca ttatatggca aaaacttctg
     1621 tgagtccaca agggatgctt tctatctgct catgagaaac attctaaaag tcaaagttac
     1681 agatgaagtc acctactttg tattactcct ggggaaagtc ctagtttctg ggattgtagg
     1741 tgtcttggcc ttcctgctct tcacagagag actacacgaa atcgtagagg gaccaacgag
     1801 tttaaattac tactgggtcc ccttcctggt aagaactggt gactttagtg attgggtgat
     1861 tggcttcggc aatgcaagtg tattccccgg agttttgaaa ggcttggagg tgaagatctg
     1921 gagaggaatg atgggtctgc agagaaacct tactttgtaa cacccagcct gcacagcatt
     1981 ctgaccaaga agcgcccggt tccccagaga taga
//
