LOCUS       NM_001013914            2302 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus solute carrier family 44, member 3 (Slc44a3),
            mRNA.
ACCESSION   NM_001013914 XM_227648
VERSION     NM_001013914.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Traiffort,E., Ruat,M., O'Regan,S. and Meunier,F.M.
  TITLE     Molecular characterization of the family of choline
            transporter-like proteins and their splice variants
  JOURNAL   J Neurochem 92 (5), 1116-1125 (2005)
   PUBMED   15715662
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079142.1.
            
            On Apr 20, 2005 this sequence version replaced XM_227648.3.
            
            Sequence Note: This sequence has been modified as follows: removed
            36 bp suspected to be vector contamination from the 3' end.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079142.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2302              BC079142.1         1-2302
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q42"
     gene            1..2302
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /note="solute carrier family 44, member 3"
                     /db_xref="GeneID:295417"
                     /db_xref="RGD:1305808"
     exon            1..52
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            53..157
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            158..300
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     CDS             167..1981
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /codon_start=1
                     /product="choline transporter-like protein 3"
                     /protein_id="NP_001013936.1"
                     /db_xref="GeneID:295417"
                     /db_xref="RGD:1305808"
                     /translation="MGYSVVAGAAGRLLFGYDSFGNVCGKRNSPVEGAPLSGQDMTLK
                     KHVFFMNACNLEVKDRGRGPMALCVSSCPEKQLDTLEEVQLFANINGSFLCVYSLNSF
                     NYTQSPSADRLCPRLPVPPSKPFPLFNRCIPQTPECYSLFASVLLNDADALHRILSGI
                     MAGRDTILGLCAFVFALSLAMLFTFRFISTLLVHIIISLVILGLLFVCGVFWWLYYDY
                     TNDLSTELDTEKENMKCMLAFAVITTVVTVVLLALIFTLRKRVKLTVELLRVTNKAIS
                     RCPFLLLQPLWTFAILVFFWVLWVAVLLSLGTAGTAQVMEGGQVEYKPLSGIRYLWWY
                     HLIGLIWTSEFILTCQRMTVAGAMVTCYFNRNQNDPPARPILSSLSTLFCYHQGTAVK
                     GSLLLTVTRIPRVIFMYIYSTVKERHSAWPRGEFRCSYCGLWCLTNYPYHLNQDAYAA
                     AAINGTDFCTSAKDAHTIISKNSSHLTSVNCFGNFIIFLGKVLVVCFSVFGGLMAFNY
                     NRALQVWAIPLLLVAFFAYLAAHSFLSVFETVLDTLFLCFAVDLETNDGSSEKPYFMD
                     PGFLSFVKRTDHFNNARSQGHKNSLPNEEGTELRPIVR"
     exon            301..437
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            438..531
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            532..692
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            693..782
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            783..907
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            908..1094
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..1260
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            1261..1417
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            1418..1501
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            1502..1639
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            1640..1876
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
     exon            1877..2302
                     /gene="Slc44a3"
                     /gene_synonym="RGD1305808"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggtcctgg cgacacagta cctgacacaa gtgttgggcc agggccagaa aggtttctgc
       61 agagaaaaca aggcagagag agtggcgacc ccaaatttat agaaaatgca cagatacggc
      121 gtggctagtc ttgttctttc tcttttggac tggtttggtg ttcatcatgg gttactcggt
      181 ggtggccggg gcggcaggaa gactcctctt tggatatgac agctttggca atgtgtgtgg
      241 caagaggaac tctccggtgg aaggcgcccc cctctctggg caggacatga ctctaaaaaa
      301 acatgtgttc tttatgaatg cctgcaatct ggaagtcaaa gacaggggac gtggtcccat
      361 ggccctctgt gtatccagct gtcccgagaa gcagctggac accctggaag aggtccagct
      421 tttcgccaac atcaatggct ctttcctgtg tgtgtatagt ctgaattcct tcaactacac
      481 tcagagtcca agtgcagata gactgtgtcc caggctcccg gttcctccga gcaagccgtt
      541 ccccttattt aaccggtgca tccctcagac ccccgagtgc tattccttgt ttgcatcggt
      601 cttgctgaac gatgccgacg ctctccatcg gattctaagt ggaatcatgg caggaagaga
      661 caccatcctc ggcttgtgtg cctttgtatt cgccttgtct ctggccatgt tgttcacctt
      721 ccgattcatc tcaacgctcc tggtccacat tatcatctcc ttggtcattc tgggattgct
      781 gtttgtctgt ggtgtcttct ggtggctgta ttatgactac accaatgacc tcagtacaga
      841 attggacaca gaaaaggaga atatgaagtg catgctggcc tttgctgtca tcaccaccgt
      901 cgtgacagtc gttctcctgg ccctgatttt caccctcaga aagagagtga aattgacggt
      961 tgagcttctc cgagtcacaa ataaagcaat cagcagatgt cctttcctgc tgttgcagcc
     1021 actgtggaca tttgccatcc tcgttttctt ctgggtcctc tgggtggctg tgctgctgag
     1081 tctgggaacc gcaggtactg cccaggtgat ggaaggtggc caagtggaat ataaacctct
     1141 ctcaggcatt cggtatctgt ggtggtacca tttaattggc ctcatctgga ctagtgaatt
     1201 catccttacg tgccagcgga tgactgtagc aggagcgatg gtcacttgtt atttcaacag
     1261 gaatcaaaat gaccctcctg cccgtccaat cctttcatct ctctccacac ttttctgcta
     1321 ccatcaagga actgcagtga aagggtcact tttactcact gtgacaagga tcccaagagt
     1381 cattttcatg tacatttata gcaccgtgaa agagcggcac agtgcttggc caagaggtga
     1441 attcagatgc agctactgtg ggctttggtg tctcaccaat tatccatacc atctcaatca
     1501 ggacgcgtat gccgcagcgg ccattaatgg gacagacttt tgtacatcag caaaagacgc
     1561 gcacacaatc atatccaaga attcaagtca cctcacgtct gttaactgct ttggaaactt
     1621 tatcattttc ctgggaaagg tgctggtggt gtgcttcagc gttttcgggg gcctgatggc
     1681 gtttaactac aaccgtgcgc tccaggtatg ggccatccct ctgctgctgg ttgccttttt
     1741 cgcctactta gcagctcaca gtttcttatc tgtgttcgaa actgtgctgg atacactttt
     1801 cctgtgcttt gctgtcgacc tggaaacaaa tgatggatcg tcggagaaac cgtactttat
     1861 ggacccaggg tttttgagtt ttgtaaaacg gaccgaccac tttaacaatg ccaggtctca
     1921 aggacacaag aactcactac caaatgaaga ggggacagaa ctccggccca ttgtgagata
     1981 gaggccaaga gacatttgca cttggagaac tcgatcatgc tctgaccacc tatgacacca
     2041 aagcagtcta cagctgtttt cacgaactag agccagacaa atgttaaagc catgtttata
     2101 tgcaccgctt taaaaggctc aacttggggc tggagagagg gctcagcggt taggagcagg
     2161 gactgctctt ccagaggtct tgagttcaat tcccagcaac cacatggtgg ctcacaatca
     2221 tctgtaatgg gatccaatgc cctcctctgg tgtgtctgag gacagctaca gtgtattcac
     2281 atagacaaaa taaataaatc tt
//
