LOCUS       NM_001107742            2563 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus solute carrier family 43 member 1 (Slc43a1),
            mRNA.
ACCESSION   NM_001107742 XM_001065058 XM_230050
VERSION     NM_001107742.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Bodoy S, Martin L, Zorzano A, Palacin M, Estevez R and Bertran J.
  TITLE     Identification of LAT4, a novel amino acid transporter with system
            L activity
  JOURNAL   J Biol Chem 280 (12), 12002-12011 (2005)
   PUBMED   15659399
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Babu E, Kanai Y, Chairoungdua A, Kim DK, Iribe Y, Tangtrongsup S,
            Jutabha P, Li Y, Ahmed N, Sakamoto S, Anzai N, Nagamori S and Endou
            H.
  TITLE     Identification of a novel system L amino acid transporter
            structurally distinct from heterodimeric amino acid transporters
  JOURNAL   J Biol Chem 278 (44), 43838-43845 (2003)
   PUBMED   12930836
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473949.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_230050.3, XM_001065058.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161926.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..2563
                     /gene="Slc43a1"
                     /note="solute carrier family 43 member 1"
                     /db_xref="GeneID:311168"
                     /db_xref="RGD:1308229"
     exon            1..301
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     CDS             186..2006
                     /gene="Slc43a1"
                     /note="solute carrier family 43 (amino acid system L
                     transporter), member 1"
                     /codon_start=1
                     /product="large neutral amino acids transporter small
                     subunit 3"
                     /protein_id="NP_001101212.1"
                     /db_xref="GeneID:311168"
                     /db_xref="RGD:1308229"
                     /translation="MRFGIGILGLRRSGVWKRRGDTVLPRVSTAVGGKFVGDRVSATM
                     APTLKQAYRRRWWMACTAVVENLFFSAVLLGWASLLIMLKKEGFYSSLCPAENRTNTT
                     QDEQQWISCDQQEEMLNLGFTIGSFLLSATTLPLGILMDRFGPRPLRLVGSACFAASC
                     TLMALASRDTEVLSPLIFLALSLNGFAGICLTFTSLTLPNMFGNLRSTFMALMIGSYA
                     SSAITFPGIKLIYDAGVSFMVIMFTWSGLACLIFLNCALNWPAEAFPAPEEVDYTKKI
                     KLIGLALDHKVTGDRFYTHVTIVGQRLSQKTPSLEEGTDGFISSSDIPGTSEKTPEKS
                     VPFRKSLCSPIFLWSLVTMGMTQLRVIFYMGAMNKILEFLVTGGKECETNEQRQKVEE
                     TVEFYSSIFGVMQLLCLLTCPLIGYIMDWRIKDCVDDPTEGTLNESASFGDARDGTIT
                     KFTKPRYRKIQKLTNAINAFTLTNILLVGFGITCLIKNLHLQLVAFVLHTVVRGFFHS
                     ACGGLYAAVFPSNHFGTLTGLQSLISAVFALLQQLLFMAMVGPLHGDPFWVNLGLLIL
                     SLLGFLLPSYLYYYRSRLEREYATNLLDPQKVLNTSKVAT"
     exon            302..468
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            469..643
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            644..699
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            700..776
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            777..869
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            870..1003
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1182
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1183..1329
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1330..1365
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1366..1519
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1520..1661
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1662..1735
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1736..1859
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1860..2563
                     /gene="Slc43a1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agctatcaac tgggcagatc tcgtagtcca tgccctggct tccccgcttc actgatctgt
       61 ggcgccccga aggttcccag atccaccgct ctttccaggg cgcagacgag gtgagaccgg
      121 cgagcttgtg gagctgaagc tctgaggacc gctgggtctg gcacgcaggg aagacccccg
      181 cgtggatgcg gtttggaatt gggatcctgg gtctccggag atccggagtg tggaagcgcc
      241 gcggagacac tgtgttaccc cgggtgtcaa cagctgtggg aggcaagttt gtcggggaca
      301 gagtctcggc caccatggcc cccacgctga agcaggcgta ccgcaggcgc tggtggatgg
      361 cttgcaccgc tgtggtggag aacctcttct tctccgcggt gctcctgggc tgggcctccc
      421 tgctgatcat gctcaagaag gaaggcttct attccagtct atgcccagcc gagaacagga
      481 ccaataccac ccaagacgaa cagcagtgga taagctgtga ccagcaggaa gagatgctca
      541 atctgggttt caccattggc tccttcctgc tgagcgctac cacactgcct ctggggattc
      601 tcatggaccg ctttgggccc aggcccctgc gcctggtagg cagtgcctgc tttgccgcat
      661 cctgcactct tatggccttg gcctcccggg acactgaagt tttgtctccg ttgatattcc
      721 tggcactgtc cttgaatggg tttgctggca tctgcctaac gtttacctca cttactctgc
      781 ccaacatgtt tgggaatttg cgatccactt tcatggccct catgattggt tcctatgcgt
      841 cttccgccat cacatttcct ggaatcaagc tgatctacga tgctggagtc tccttcatgg
      901 tcatcatgtt cacgtggtct ggcctggcct gtcttatctt tctgaactgc gctctcaact
      961 ggcctgcaga agcctttcct gcccccgagg aagttgacta cacgaagaag atcaaactca
     1021 ttgggttagc cttggaccac aaggtcacag gtgaccgctt ctacacccat gtaaccattg
     1081 tgggtcagcg gctgagtcag aagaccccca gcctggagga ggggactgac ggctttattt
     1141 cgtcctcgga tatccctggt acctcagaaa agactcctga aaagtctgtc ccttttcgca
     1201 agagcctctg ctcccccatt ttcctgtgga gcctggtcac catgggtatg acccagcttc
     1261 gggtcatctt ctacatgggg gccatgaaca agatcctgga gttcctcgtg actggtggca
     1321 aggaatgtga gacgaatgag cagagacaga aggtagaaga gacagttgag ttctactctt
     1381 ctatcttcgg agtcatgcag ctgctgtgtc ttctcacctg ccccctcatt ggttacatca
     1441 tggactggcg catcaaggac tgcgtggatg atccaacgga gggcactctg aatgagagcg
     1501 cttcctttgg agatgccaga gatgggacta tcaccaagtt caccaaacca cgctaccgca
     1561 agatacagaa gctcaccaat gccatcaatg ccttcaccct gaccaacatc ctgcttgtgg
     1621 gttttggcat cacctgcctc atcaagaact tacacctgca gttggtggcc tttgtcctgc
     1681 acaccgttgt tcgtggtttc ttccactcgg cctgtggagg tctctacgct gcagtgttcc
     1741 cgtccaatca ttttgggacg ttgacaggtc ttcagtccct catcagtgcc gtgtttgctc
     1801 tactgcagca gctactcttc atggccatgg tggggcccct gcacggagat cccttctggg
     1861 tgaatctggg cctcctgatt ctctcactcc tgggatttct cctaccttcc tacctctact
     1921 actaccggtc tcgattggag agagagtatg ccacgaattt gctagatcca cagaaggtgc
     1981 tcaatacttc gaaggtggct acgtagactc tggaggccaa gagacttgga ggacaggcaa
     2041 tcaaggcctg ataaagcaaa gggaatgccc cgtggctttc tacctgcatc gtatgcatag
     2101 agccaggggc tgtggattta taaatactaa gagttctatt tttgtaggga ctggcaaaaa
     2161 agggaaacaa acagaacaaa agccccaaac caaaaacagc ccttaaaaaa ttcccccaaa
     2221 caatctgtcc gtcaactgaa gatagtgcct attccagtgg tattgggcca tcttcttgga
     2281 aaactgagtg tggggttgcc ctttctccac acttggccta ggagcctctg tggagctgcc
     2341 ttcggaagac tcatgggatc agtgaatgga ctacgctaag attccagctg ccaagtgtgc
     2401 acacatacgt gttatgcaca tgcattcttt cctgtggggg agggactgag gggctggctg
     2461 tagccatgat ggggtgtggg ggctggaggg cgggttccct ccctggtgct gtttcttaca
     2521 ggtcttagag gaaataaaca gggaagcgaa atctggctgg tgt
//
