LOCUS       NM_001401082            5095 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus solute carrier family 41 member 2 (Slc41a2),
            transcript variant 3, mRNA.
ACCESSION   NM_001401082 XM_039079425
VERSION     NM_001401082.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5095)
  AUTHORS   Goytain,A. and Quamme,G.A.
  TITLE     Functional characterization of the mouse [corrected] solute
            carrier, SLC41A2
  JOURNAL   Biochem Biophys Res Commun 330 (3), 701-705 (2005)
   PUBMED   15809054
  REMARK    Erratum:[Biochem Biophys Res Commun. 2007 May 11;356(3):822]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Feb 1, 2022 this sequence version replaced XM_039079425.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643297.24661.1,
                                           SRR26360186.1290782.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-268               JAXUCZ010000007.1  22271717-22271984
            269-982             JAXUCZ010000007.1  22294036-22294749
            983-1090            JAXUCZ010000007.1  22298217-22298324
            1091-1162           JAXUCZ010000007.1  22307040-22307111
            1163-1307           JAXUCZ010000007.1  22308882-22309026
            1308-1454           JAXUCZ010000007.1  22313212-22313358
            1455-1602           JAXUCZ010000007.1  22328827-22328974
            1603-1682           JAXUCZ010000007.1  22330977-22331056
            1683-1814           JAXUCZ010000007.1  22351394-22351525
            1815-1963           JAXUCZ010000007.1  22352665-22352813
            1964-5095           JAXUCZ010000007.1  22375633-22378764
FEATURES             Location/Qualifiers
     source          1..5095
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q13"
     gene            1..5095
                     /gene="Slc41a2"
                     /note="solute carrier family 41 member 2"
                     /db_xref="GeneID:362861"
                     /db_xref="RGD:1307292"
     exon            1..268
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
     exon            269..982
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
     CDS             431..2149
                     /gene="Slc41a2"
                     /note="isoform 1 is encoded by transcript variant 3;
                     solute carrier family 41 (magnesium transporter), member
                     2"
                     /codon_start=1
                     /product="solute carrier family 41 member 2 isoform 1"
                     /protein_id="NP_001388011.1"
                     /db_xref="GeneID:362861"
                     /db_xref="RGD:1307292"
                     /translation="MTHSKGRPATYKTSASPESGGGFVDWTLNLNTIQSDKFLNLLLS
                     MVPVIYQKNQEDRHKKVNGIWQDGLSGAAQTFSKRSEPHLDYHEFSEQAFHSGGGHTP
                     ASCSPRYDDYAGYNYCDGREASETTAMLQDEDPSSQGDDVIVETSQRLPKESSGVMAL
                     QILVPFLLAGFGTVSAGMVLDIVQHWEVFKNVTEVFILVPALLGLKGNLEMTLASRLS
                     TAVNVGKMDSPIEKWNLIIGNLALKQVQATVVGFLAAVAAIILGWIPEGKYYLSHSIL
                     LCSSSVATAFIASLLQGIIMVGVIVGSKKTGINPDNVATPIAASFGDLITLAILAWIS
                     QGLYSCLETYYYISPLVCAFFLALTPIWIIIAAKHPATRTVLHSGWEPVITAMVISSI
                     GGLILDTTVSDPNLVGIVVYTPVINGIGGNLVAIQASRISTYLHLHSLPGELPEEPKG
                     CSYPFRTFFGSGVNNKSAQVLLLFVIPGHLIFLYTIHLMKSGHTSLTVVFVVVYLLAA
                     VLQVFTLLWIADWMVHRFWRKGKDPDSFSIPYLTALGDLLGTALLALSFHFLWLIGDR
                     DGDVGD"
     exon            983..1090
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
     exon            1091..1162
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
     exon            1163..1307
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
     exon            1308..1454
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
     exon            1455..1602
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
     exon            1603..1682
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
     exon            1683..1814
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
     exon            1815..1963
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
     exon            1964..5095
                     /gene="Slc41a2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaggcgcgg cgggcccgcg gggctgggcc gggctcacgg accccggggg cgtcgccgct
       61 cttgggctcg gcgtaggcgg ctacggaggg agcggaggct gcggctcggc tgggtgtggg
      121 agggcggcgt tgcggccgga cgctggaacc tgggccggcg ggacccgagg ccgcccgact
      181 ctatccagcc ctgcctgccg ctagcctcgg gctccgcgcc gggttctggc ggtggtgacc
      241 cagggcgcgc gccgagggat ggaggaagat tgaattcctc tcttaaattt ctggatgtgt
      301 tttcactcgt ggaaacgttt tctacagagc agtcaatggc ttaattcgag caagtgttgg
      361 ctgtgacttg ctttcgctgt tcttcaggaa gctcgagtct gccggataca gggctttttg
      421 tgatgacaat atgacccaca gtaaaggaag acctgccact tacaagacaa gtgccagtcc
      481 ggagagcgga gggggttttg tagattggac tttaaattta aatacaattc aatctgacaa
      541 gtttctaaac ttactgttaa gcatggtgcc agtcatttac cagaaaaacc aggaagacag
      601 gcataaaaaa gtcaacggca tttggcagga cgggctgtct ggtgcggcac aaactttcag
      661 caagagatcg gagccacatc tggactacca tgagttctcc gagcaggcct tccacagcgg
      721 cggtggccat accccagcca gctgcagccc caggtacgac gactatgccg gctataacta
      781 ctgtgacgga agggaggcct cagaaaccac cgccatgtta caagatgaag atccgtccag
      841 tcagggcgat gacgttattg tggaaacaag ccagaggctc ccgaaggaat ccagtggagt
      901 catggctctg cagatacttg tgccattctt gctggccggt tttggaactg tttccgctgg
      961 catggttttg gacatagtgc agcactggga ggtgttcaaa aacgtgacag aagtcttcat
     1021 tttggtgccc gcgcttcttg gtctgaaagg gaacttggaa atgacattgg cgtctcgatt
     1081 atccactgca gtgaatgtcg ggaagatgga ctcacccatt gagaagtgga atctaatcat
     1141 aggcaacttg gctttgaagc aggtgcaggc cacagtagtt ggttttctgg cagctgtggc
     1201 agcgatcata ctgggctgga ttccggaagg gaaatattac ctcagccatt ccatactcct
     1261 gtgctccagc agtgtggcaa ccgccttcat tgcgtctctc ctgcagggaa taataatggt
     1321 tggagttatc gttggctcca agaagacagg cataaacccc gacaacgtgg ccacacccat
     1381 tgctgctagt tttggtgatc tgataactct ggccatatta gcttggataa gtcagggttt
     1441 gtactcctgt cttgagacat attattacat ttctccatta gtgtgtgcct ttttcttggc
     1501 tctgactccc atctggatta tcatagctgc caagcaccca gctaccagga cagtgctcca
     1561 ctcgggctgg gagccagtca taacagccat ggttataagc agcatcgggg gccttattct
     1621 ggacacaacc gtatctgacc caaacttggt tgggattgtt gtttacacgc cagttatcaa
     1681 cgggatcggt ggcaatttgg tggccattca ggctagcagg atttctacct acctccattt
     1741 acacagcctc cccggagaac tacctgagga gcccaaaggc tgctcctacc catttaggac
     1801 gttttttggt tcaggagtga acaataagtc tgcccaggtt ctcctgctct tcgtgattcc
     1861 cggccacctg atcttcctct acacaatcca tctgatgaag agcggccaca cctctctgac
     1921 tgtagtcttt gttgttgtgt acctgcttgc tgctgtgctc caggtgttca ccctgctgtg
     1981 gatcgctgac tggatggtcc atcgcttctg gaggaaagga aaggacccag atagtttctc
     2041 catcccgtac ctgacggcgc taggcgacct gcttgggacc gctctgctgg ccttaagctt
     2101 ccattttctc tggcttatcg gagaccgaga tggcgacgtt ggagactaac ggaccgacaa
     2161 gctgccgtgg ggtcacccgg ggggagaaca caggcagcca ttgctgcccc tccaaagctc
     2221 ttcatctgtc ctgtgactta cgccagggta gtctgcggtt caccctgact ccataaatgg
     2281 ccttaacgta ctttttaagg gatttgtgaa tctgaaacca catgaaaggt atttgtgctg
     2341 cttttttgta gaataaataa tttgacacag acatagatac aagctcacac tctaaagtca
     2401 attagggaag aatataggat gtttacaatg agttaatttt gaaaccacag acccggcaga
     2461 agtatacttt attattaagt tataatgcac agttagaggc aaggtggctt tacccttctc
     2521 tgtcttacgg ctgtgtcaca ctacaaagag tgccatgacc tggtaccatc tgagcttccc
     2581 taagtgttaa ttaactaggc cttcctcctc gggagctaag gttcattccc cgaacatggc
     2641 aaccagctcg cttttacccg agtctcaaac tgcccccgcc aactctgcga gttctcaaca
     2701 gccaaccctt tgagtagatt ctttttcttt tgtggagaca gggcttgctc tctgtgttgt
     2761 ccccgcaagc cttcagcttg ccgtcctctt gcttcggttc cctccacctg gtgctaaaag
     2821 cactgagcag tctcactcat cctgtgttga aaatgttgat ctaatttagg aaactgtgat
     2881 gaaagcagga ggtcagttga gctgtgtttg tgggcacagg gtggtgtgtg tgtgtgtgtg
     2941 tgtgtgtgtg tgtgtgtgtg tgtgtgtatg tgtgtgtgtg tgcgcgcgcg tgcgcgtgcg
     3001 tgtgcgtgtt tgtgccgtgt gtatatgtgt gtgtatacgt gtgtgcacat gtctgcatgt
     3061 gtgtgcgtgc atgtgtatat acatgcatgt gtgtacatac gtgtgtgtgt gtgtatgtgt
     3121 atgtgtgtat gcgtatgtgt gacatatgtg tgagacagac cagagagagg ggggggaagc
     3181 acttttcaaa aataagtacc atttaatata atgcagctgt aaaatctggc aagagcaggc
     3241 ggtcctgttg ccctttaagg cgcccttcct gtggatgtcc ctccaaagga gaagttggtg
     3301 acttacctca ttacctcagc atccatctta tcacttcatc tacagggacc gcctcacgta
     3361 tgcggctgta ttcctcagat atcctgaaac tttggccaat atcgtaagca ccttaacccc
     3421 tggctactca gttgtaagca cttttagatc acttagcact taaaagtgcc gtgcaatctt
     3481 tcaaggccgt taaatgtcta ataatttaaa ctgctgaggg gataagaccc gcatggcgtt
     3541 ggttgtcatg gcgaggttgt gcgggtggct tttgaataga ctgcagaagt attattatta
     3601 agtcttcgtg gagtctgtgg tttagagtgg agtatttttg ctttttttta aacttcgttc
     3661 agttctccgg ccttataatc aaacttttaa ggcatagaac tgaatgaact atggatctct
     3721 cctttggaga gttagtgtca cagaggggac attctgacaa aataagcgta aagtttaagt
     3781 taatgagtaa atagttgcaa agattatttt atttttgaaa aagttaatga atactccctt
     3841 tcatttatat aaaaacattt gtgaatttgg gttttgcatt tggctgtatg ctcttttttt
     3901 gtttgtttgt tttgagtctt gcccaggctg ggtttaaact tcggatccac ctgtctttgc
     3961 ctcctgggat tcattttctt taactcacaa aaaaatatgc agagtaagcc ccagtgttag
     4021 ccagtgttag ccagtgttag cctgtgttag ccagtgttag cctggctgac agtgttctgc
     4081 acattcctaa gcacaggaag atgcgtgctg acagcatcag caccttgtgg gtgggttgaa
     4141 tggagactcc tgtctgggtt ttgtcacagg ggccatggac atgcagagga gtgacatttg
     4201 taagatttca cagccacaca gtgggcagac ccgtctggac cagtacatct tgtcatacat
     4261 gtgtgtccca cccccaaatg tacagtgtcc acctagttac ctgagagaac gccccagtca
     4321 agtgttacta gtcttttaga tttcagcagg gaagcctcca cctaatgtgg accaactctg
     4381 aactattcct gtccctaagg tcagagaggc cataaatgaa catttacctt atatttttat
     4441 ttcataatga aatcttttag gccaaacaac aatgtctcgc ttcttaaagc cacaaagagc
     4501 caacccccct cctagatccg ctgtgccagg acggatagtg ggaggctgat tctcaacctt
     4561 taccagaaca gcaaaatgtc taagacacat gtaacgggca aaaacagaat gctcagacca
     4621 aatgcgttgt aaagtgatat gcactgttaa ttacagatct ttgaaagtct ctgtgcacat
     4681 atgtaagttt tattcaacca taaaatttat tatcagtctt aggtaaatga acagtatttt
     4741 tataccacat aaaccctgct ttccaaaact catttccctc taacttacca ggcacattat
     4801 acacacagct taaaaaagat catatttttt tattcttgac catccactta ttttgaaatt
     4861 tccaaagttt cttagaagcg aattaaatag aaactcatgg ggagtgtctt atggagacgt
     4921 cagaaaatgt cacaccagag atcatccatg ctgtagccaa atgcatcttc taagtctgtc
     4981 agtggtgggg tgtacccacc ttccctgtgt ctaaagtata ctttgcccac tgacagtggg
     5041 ctctggcacc ttgggattgc tgtgaaccca aatcaaaata aaatctgaga agcaa
//
