LOCUS       NM_001108728            2828 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus solute carrier family 39 member 5 (Slc39a5),
            mRNA.
ACCESSION   NM_001108728 XM_001067058 XM_343140
VERSION     NM_001108728.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2828)
  AUTHORS   Guo,H., Jin,X., Zhu,T., Wang,T., Tong,P., Tian,L., Peng,Y., Sun,L.,
            Wan,A., Chen,J., Liu,Y., Li,Y., Tian,Q., Xia,L., Zhang,L., Pan,Y.,
            Lu,L., Liu,Q., Shen,L., Li,Y., Xiong,W., Li,J., Tang,B., Feng,Y.,
            Zhang,X., Zhang,Z., Pan,Q., Hu,Z. and Xia,K.
  TITLE     SLC39A5 mutations interfering with the BMP/TGF-beta pathway in
            non-syndromic high myopia
  JOURNAL   J Med Genet 51 (8), 518-525 (2014)
   PUBMED   24891338
REFERENCE   2  (bases 1 to 2828)
  AUTHORS   Zheng,S., Damoiseaux,R., Chen,L. and Black,D.L.
  TITLE     A broadly applicable high-throughput screening strategy identifies
            new regulators of Dlg4 (Psd-95) alternative splicing
  JOURNAL   Genome Res 23 (6), 998-1007 (2013)
   PUBMED   23636947
REFERENCE   3  (bases 1 to 2828)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   4  (bases 1 to 2828)
  AUTHORS   Dufner-Beattie,J., Kuo,Y.M., Gitschier,J. and Andrews,G.K.
  TITLE     The adaptive response to dietary zinc in mice involves the
            differential cellular localization and zinc regulation of the zinc
            transporters ZIP4 and ZIP5
  JOURNAL   J Biol Chem 279 (47), 49082-49090 (2004)
   PUBMED   15358787
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474104.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_343140.3, XM_001067058.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..2828
                     /gene="Slc39a5"
                     /note="solute carrier family 39 member 5"
                     /db_xref="GeneID:362812"
                     /db_xref="RGD:1310322"
     exon            1..303
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
     exon            304..657
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
     CDS             374..1975
                     /gene="Slc39a5"
                     /note="zinc transporter ZIP5; solute carrier family 39
                     (metal ion transporter), member 5; solute carrier family
                     39 (zinc transporter), member 5"
                     /codon_start=1
                     /product="zinc transporter ZIP5 precursor"
                     /protein_id="NP_001102198.1"
                     /db_xref="GeneID:362812"
                     /db_xref="RGD:1310322"
                     /translation="MGPPVHHLLAGLCVGVALGWVEGSVPNLGPAEQEQNHYLAQLFG
                     LYGENGTLTAGGLARLLHSLGLGRVQGLRLGHQEPPTGRAAPMSGDNFTHRLQELELS
                     VDVWAGMPLSPSGWGDQEDSKAHDLHGSGPSGLDLFHRLLLLDHSLADHLNEDCLNGS
                     QLLVNFGLSPVAPLTPRQFALLCPALLYQIDSRVCIKTPAPAPPGDALSALLHSGLAV
                     LFLSLPAPFSLLLLRLLGPRLLRPVLGFLGALAVGTLCGDALLHLLPHAQGGRHTGPS
                     EQAEEDLGPGLSVLGGLFLLFVLENALGLVRHRGLRPRCGRNKRDVEEPNPDPEDGTG
                     MVLRPLQAASEVQGQRENSQSLPSPAPPGYQGHSHEHRGGSIAWMVLLGDCLHNLTDG
                     LALGAAFSDGFSSGLSTTLAVFCHELPHELGDFAMLLQEGLSFRKLLLLSLVSGVLGL
                     GGAALGVGLSLGPVPLTPWVFGITAGVFLYVALVDMLPALLRPPEPRPLPHVLLQGLG
                     LLLGGSLMFTIALLEEQLLPVVPDG"
     exon            658..838
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
     exon            839..1001
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
     exon            1002..1171
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
     exon            1172..1312
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
     exon            1313..1406
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
     exon            1407..1559
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
     exon            1560..1640
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
     exon            1641..1831
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
     exon            1832..2828
                     /gene="Slc39a5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgacgtggc ttccactgca tctgaagact gaactccctg actcagaaat ctcttaaggt
       61 ccacagtgag gccctccagg gacctgaggt gccattagga gtgaggccct gcatatgtgg
      121 gggtgagggg agtagggcgg tggaacaggt taagaggtgg gtcttgggga tctgagatac
      181 tagtctggtt tctagaccag acctaaggag agctctgggg tcaggaggct gctccagaag
      241 gcagaaggaa ggggcagagt aagcctgagg ctgcagaggc tgcagaggct gcagatagac
      301 tcaggtacaa tcctcaggat gtcccaaagg aaatagaagt cagaaccaga gcctctaacc
      361 catagcccta gtgatggggc cccccgtaca tcatctgttg gctggcctgt gtgtgggggt
      421 ggccttgggc tgggtagaag gctcagtccc caacctgggc ccagccgaac aggaacagaa
      481 ccactacctg gcccagctgt tcggtctata tggagagaat gggacattga ctgctggggg
      541 cctggcccgg cttctccaca gcctaggact gggccgagtt caggggctcc gcctgggaca
      601 ccaagagcct ccaactgggc gggctgcacc catgagtggc gacaatttca cacacaggct
      661 tcaggaactg gagctgagtg tggatgtctg ggcaggaatg cctctgagcc cttcaggttg
      721 gggtgaccag gaggactcaa aggcacatga cctgcatggg tcagggccct cgggcctaga
      781 cctcttccac aggcttctgc tgctggacca ttcgttggct gaccatctga acgaggattg
      841 tctgaatggt tcccagctgc tggtcaattt tgggctgagt cctgttgctc ctctgacccc
      901 tcgtcagttt gctctgttgt gcccagccct gctttatcag attgacagcc gtgtttgcat
      961 caaaacccct gctccagcac ctccagggga tgcactgtct gccctgcttc atagtggcct
     1021 ggcagtcctg ttcctcagcc tccctgctcc cttctccctg ctgctgctgc ggctcttagg
     1081 acctcgtctg ttgcggcctg tgctgggctt cctgggggcc ctggctgtgg gcactctttg
     1141 tggggatgcc ctgctccacc tgctgccaca tgcacaagga ggacggcaca caggacctag
     1201 tgagcaagca gaggaggatc tgggtccagg gctgtcagtg cttggtggcc tcttcctgct
     1261 cttcgtgtta gagaatgcac taggacttgt gcggcacaga gggctcaggc caaggtgtgg
     1321 caggaacaaa agggatgtcg aagaaccaaa ccctgaccca gaggacggca ctgggatggt
     1381 ccttcggccc ctacaggcag cttcagaggt tcagggccag agggaaaaca gccagtccct
     1441 accatctcca gcccctcccg gataccaagg ccacagtcat gagcaccggg gcggtagtat
     1501 cgcatggatg gtcctcctgg gagattgcct gcacaacctc accgatgggc tcgcactagg
     1561 tgctgccttt tccgacggct tctccagtgg cctcagcact accctagcag tcttctgcca
     1621 tgagctgccc catgaactgg gtgactttgc aatgctgctt caggaagggc tgtcctttcg
     1681 gaagctgctg ctgctgagcc tcgtctctgg agtcctgggg ctggggggtg cagccctggg
     1741 ggtggggctc agcttgggcc ctgtccccct cactccctgg gtgtttggga tcacggctgg
     1801 ggtcttcctc tatgtggccc ttgtggatat gctgccagcc ctgctccgtc ctcctgagcc
     1861 ccggcccctg ccccatgtgc ttctgcaggg gctggggctg ctgctggggg gcagcctcat
     1921 gtttactata gccctgttgg aggaacagct actgcccgtg gttcctgatg gctgatgtgg
     1981 gccagtggca aaggatgcag gctgcccttc cttcccccca ccacaggaac ggaggcggga
     2041 cacagggcca gtaggagcaa taggatttta ataaacagaa cccatcccaa agccatgact
     2101 acgacagttg tacttgcacc aaaacagcat agaaaaccgg ggtgtagtgg gagggctcaa
     2161 agcaggtttg gggaggacaa gcatggggga gggcctggag gttgtggggt gcatcagtct
     2221 tcagggatag cattgtgctt tagcccaggt gggggggcag ggcaaatgca ccaaggtccc
     2281 catttttttc tgctgccctc agcaccctgg agatgcaggt atctgggcct attgctgccc
     2341 accagcatta aacacccctg accccaacac tagcaccaca gggggatcca ggatagggag
     2401 aagggcagga gtgaggaaat tgcttagaga aagattcaac tagaatccag tgaattgtgc
     2461 tcagttctct ttacttccta caaccgagta catgggtcac agggtggagg gtgcaacggg
     2521 acaggaacat gcccctccgt gccccccaac acgcctgcac acaggatggt ggtgtctgca
     2581 gcatcacagg tcatgcaggg catggggaag gggttcacac acacatagat gcccacagtg
     2641 gggaccagac agaacacccc tgaatataca cagctgtaca tggggaaccc caggtcccca
     2701 cccaaacctc tcccctgtct tgctgttccc cagcaggaga actgtattgc tttgagagag
     2761 ccaccctggg gctgctctgc caggcaccct cccctcccac ccacccctat tttggcacat
     2821 ctgcaaga
//
