LOCUS       NM_001013042            1267 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus solute carrier family 39, member 11 (Slc39a11),
            mRNA.
ACCESSION   NM_001013042 XM_213529
VERSION     NM_001013042.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1267)
  AUTHORS   Martin,A.B., Aydemir,T.B., Guthrie,G.J., Samuelson,D.A., Chang,S.M.
            and Cousins,R.J.
  TITLE     Gastric and colonic zinc transporter ZIP11 (Slc39a11) in mice
            responds to dietary zinc and exhibits nuclear localization
  JOURNAL   J Nutr 143 (12), 1882-1888 (2013)
   PUBMED   24089422
REFERENCE   2  (bases 1 to 1267)
  AUTHORS   Yu,Y., Wu,A., Zhang,Z., Yan,G., Zhang,F., Zhang,L., Shen,X., Hu,R.,
            Zhang,Y., Zhang,K. and Wang,F.
  TITLE     Characterization of the GufA subfamily member SLC39A11/Zip11 as a
            zinc transporter
  JOURNAL   J Nutr Biochem 24 (10), 1697-1708 (2013)
   PUBMED   23643525
REFERENCE   3  (bases 1 to 1267)
  AUTHORS   Kelleher,S.L., Velasquez,V., Croxford,T.P., McCormick,N.H.,
            Lopez,V. and MacDavid,J.
  TITLE     Mapping the zinc-transporting system in mammary cells: molecular
            analysis reveals a phenotype-dependent zinc-transporting network
            during lactation
  JOURNAL   J Cell Physiol 227 (4), 1761-1770 (2012)
   PUBMED   21702047
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001013042.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC062054.1, SRR26643298.64981.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-99                JAXUCZ010000010.1  99110358-99110456   c
            100-218             JAXUCZ010000010.1  99106623-99106741   c
            219-257             JAXUCZ010000010.1  99104149-99104187   c
            258-416             JAXUCZ010000010.1  99072138-99072296   c
            417-540             JAXUCZ010000010.1  99004409-99004532   c
            541-711             JAXUCZ010000010.1  98912612-98912782   c
            712-781             JAXUCZ010000010.1  98835715-98835784   c
            782-880             JAXUCZ010000010.1  98780865-98780963   c
            881-1039            JAXUCZ010000010.1  98777997-98778155   c
            1040-1267           JAXUCZ010000010.1  98776525-98776752   c
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..1267
                     /gene="Slc39a11"
                     /note="solute carrier family 39, member 11"
                     /db_xref="GeneID:287796"
                     /db_xref="RGD:1311981"
     exon            1..99
                     /gene="Slc39a11"
                     /inference="alignment:Splign:2.1.0"
     exon            100..218
                     /gene="Slc39a11"
                     /inference="alignment:Splign:2.1.0"
     CDS             111..1118
                     /gene="Slc39a11"
                     /note="ZIP-11; zrt- and Irt-like protein 11; solute
                     carrier family 39 (metal ion transporter), member 11"
                     /codon_start=1
                     /product="zinc transporter ZIP11"
                     /protein_id="NP_001013060.1"
                     /db_xref="GeneID:287796"
                     /db_xref="RGD:1311981"
                     /translation="MLQGYSSVSQALLGTFFTWAMTAAGAALVFIFSSGQRRILDGSL
                     GFAAGVMLAASYWSLLAPAVEMATSSGGFGAFAFFPVAVGFTLGAAFVYLADLLMPHL
                     GAGEDPQTALALNLDPALVKKSDLKDPASLLFPERELSIRIDKRENGEVYQRKKLAAT
                     DFPEGAAPSGPVHGNSGQPGVSSWRRIALLILAITIHNIPEGLAVGVGFGAVEKTASA
                     TFESARNLAIGIGIQNFPEGLAVSLPLRGAGFSTWKAFWYGQLSGMVEPLAGVFGAFA
                     VVLAEPVLPYALAFAAGAMVYVVMDDIIPEAQISGNGKLASWASILGFVVMMSLDVGL
                     G"
     exon            219..257
                     /gene="Slc39a11"
                     /inference="alignment:Splign:2.1.0"
     exon            258..416
                     /gene="Slc39a11"
                     /inference="alignment:Splign:2.1.0"
     exon            417..540
                     /gene="Slc39a11"
                     /inference="alignment:Splign:2.1.0"
     exon            541..711
                     /gene="Slc39a11"
                     /inference="alignment:Splign:2.1.0"
     exon            712..781
                     /gene="Slc39a11"
                     /inference="alignment:Splign:2.1.0"
     exon            782..880
                     /gene="Slc39a11"
                     /inference="alignment:Splign:2.1.0"
     exon            881..1039
                     /gene="Slc39a11"
                     /inference="alignment:Splign:2.1.0"
     exon            1040..1267
                     /gene="Slc39a11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctggagtga agcaggaagt gactgtcgga gtggagccag gcgagcgagt ggcatcgggg
       61 gctgatggaa gtggagaggg ggctggagag ggcaccctac tgtatccagc atgcttcaag
      121 gttacagctc tgtttcccag gccttgctgg ggaccttctt cacctgggca atgacagcgg
      181 cgggagcggc tctcgtgttc atattctcca gtgggcagag gcggatctta gatggaagcc
      241 tgggttttgc tgcaggggtc atgttagcag cttcctattg gtcgctgctt gcaccagcgg
      301 ttgagatggc cacctcctca gggggctttg gtgccttcgc cttcttccca gtggccgtag
      361 gcttcaccct gggagctgct tttgtctacc tggctgacct cctgatgccc cacctgggtg
      421 ctggagaaga cccccagacg gccctggcgc tgaacttgga ccctgcattg gtgaagaagt
      481 ctgatctcaa ggaccccgcc tcactgctct tccccgagag ggaactttcc atccggatag
      541 acaagcgtga gaatggcgag gtgtaccaga ggaagaagct ggcagctacc gacttcccag
      601 agggcgcggc cccctcagga cctgtgcacg ggaactcagg gcaacccggg gtgagcagct
      661 ggaggagaat tgctctgctc atcctggcca tcaccataca caacattcca gagggtctcg
      721 ctgtcggtgt agggtttgga gcagtagaaa agactgcatc tgccaccttc gagagtgcca
      781 ggaatctggc cattggaatt gggattcaaa atttcccaga gggcctggct gtcagccttc
      841 ctctgcgtgg agcaggcttc tctacctgga aagctttctg gtatggacag ctgagcggca
      901 tggtggagcc cttggctggg gtctttggag cctttgcggt ggtgctggct gagcccgtct
      961 tgccctacgc gctggccttt gccgccggtg ccatggtcta cgtggtcatg gacgacatca
     1021 tccccgaagc ccagatcagt ggcaacggga aactggcatc ctgggcctcc atcctgggat
     1081 ttgtggtgat gatgtccctt gacgtgggcc tcggctagct ctgagaacct tgggacccca
     1141 tgaaggaaag caccagactt ctgcaggacc atgagcctct cttcacatta aaaccccatt
     1201 cctttctccc ctccgtctcc ttaccccaga tcagctctga ttacattttt tttttttttt
     1261 gactttc
//
