LOCUS       NM_001192009            2633 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus solute carrier family 38, member 8 (Slc38a8),
            mRNA.
ACCESSION   NM_001192009 XM_577668
VERSION     NM_001192009.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Sep 14, 2022 this sequence version replaced NM_001192009.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN06680430,
                              SAMN06680445 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-236               JAXUCZ010000019.1  64463725-64463960   c
            237-427             JAXUCZ010000019.1  64463182-64463372   c
            428-626             JAXUCZ010000019.1  64461918-64462116   c
            627-759             JAXUCZ010000019.1  64458663-64458795   c
            760-861             JAXUCZ010000019.1  64456821-64456922   c
            862-919             JAXUCZ010000019.1  64454957-64455014   c
            920-1034            JAXUCZ010000019.1  64450435-64450549   c
            1035-1182           JAXUCZ010000019.1  64449118-64449265   c
            1183-1391           JAXUCZ010000019.1  64448592-64448800   c
            1392-1443           JAXUCZ010000019.1  64446049-64446100   c
            1444-2633           JAXUCZ010000019.1  64442631-64443820   c
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..2633
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /note="solute carrier family 38, member 8"
                     /db_xref="GeneID:502208"
                     /db_xref="RGD:1560237"
     exon            1..236
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
     exon            237..427
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
     CDS             239..1537
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /note="putative sodium-coupled neutral amino acid
                     transporter 8"
                     /codon_start=1
                     /product="solute carrier family 38 member 8"
                     /protein_id="NP_001178938.1"
                     /db_xref="GeneID:502208"
                     /db_xref="RGD:1560237"
                     /translation="MEGQTRGSRGLPEKPLPATTHPPLSSLGAVFILLKSALGAGLLN
                     FPWAFYKAGGLVPTFLVALVSLVFLISGLVILGYAASVSGQTTYQGVVRELCGPAMGK
                     LCEACFLTNLLMISVAFLRVIGDQLEKLCDSLLPDAPQPWYAAQSFTLPLISVLVIFP
                     LSALRDIALQEYTSILGTLAACYLALVITVQYYLWPQGLIRQPGPLLSPSPWTSVFSV
                     FPTICFGFQCHEAAVSIYCSMQNQSLPHWTLVSVLSLMACCLVYTLTGVYGFLTFGTE
                     VSADILMSYPGNDTAIIVARVLFAVSIVTVYPIVLFLGRSVMQDFWKKSYWATQGSPV
                     LADPSGPWVRLPLTFLWVAVTLAMALFLPDLSEIIGVIGGLSAFFIFIFPGLCLISAV
                     DTEPIGPRVKCCLEAWGTLSVLLGTFVFGQSTAGALVELL"
     exon            428..626
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
     exon            627..759
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
     exon            760..861
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
     exon            862..919
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
     exon            920..1034
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
     exon            1035..1182
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
     exon            1183..1391
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
     exon            1392..1443
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
     exon            1444..2633
                     /gene="Slc38a8"
                     /gene_synonym="RGD1560237"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttgcaagctc ttggaacagg tggcctcaat ctgtcttctc tgtccctccg acttggatcc
       61 ttaacccaac acatgccctt aggattcccc aatgaacatc tcaagagccc agacctgtgg
      121 aggtagactc tcctttcccc cgcctcccag ggctgcagca gggcagctga agcactaaga
      181 ggaagcctaa attggaatct gctgacccag gcctgtgggg caccttactg ggtttgccat
      241 ggaagggcag accagaggga gcagaggcct tccggagaag cccctccctg ctaccaccca
      301 tccccctctg tcctcactgg gcgccgtgtt catcctcctg aagtccgcac tgggagctgg
      361 cctgctcaac ttcccctggg ccttctacaa ggcaggaggc ctggtgccca ccttcctggt
      421 ggcactggta tccttggtct tcctgatcag cggtctggtc atcctgggct atgcagcatc
      481 tgtcagtggc cagaccacct accagggtgt ggtccgtgag ttatgtggcc ccgccatggg
      541 gaagctgtgt gaggcttgct tcctgaccaa cctgctcatg atctccgtag ccttcctcag
      601 agtgatcggg gaccaactgg aaaagttgtg tgactccctc ctgcctgacg ccccacagcc
      661 ctggtacgca gcccaaagct tcaccctgcc cctgatctcc gtgctggtca tcttccccct
      721 gtcagcactt cgggacatcg ccctccagga gtacaccagc atcctaggta ctctggctgc
      781 ctgctacctt gctctggtca tcactgtgca gtactactta tggccccagg gccttatacg
      841 acagcccggt cctttgctga gcccatctcc ctggacctct gtgtttagtg tcttccctac
      901 catctgcttt ggattccagt gtcatgaggc cgcggtctcc atctactgca gcatgcagaa
      961 ccagagcctc ccccactgga ccttggtttc tgtgttgtcc ttaatggcct gctgccttgt
     1021 ctacacgctg acaggggttt atggcttcct gaccttcggg acggaagttt ctgctgatat
     1081 cttaatgtcc tacccaggca atgacacagc catcattgta gctcgggttc tctttgctgt
     1141 ctccattgtg accgtctacc ccatcgtgct gttcctgggg aggtctgtga tgcaggactt
     1201 ttggaaaaag agctactggg ccacacaggg gtccccagtg ctggctgacc cctcagggcc
     1261 ttgggttcgg ctgccactga ccttcctgtg ggtggcagtg acgctcgcca tggctctgtt
     1321 cctaccggac ctcagcgaga tcattggcgt catcggtggc ctcagcgcct tcttcatctt
     1381 catcttccca ggtttgtgcc tcatctctgc tgtggacacg gagcccatag gaccaagagt
     1441 caagtgctgc ctggaggcct ggggcaccct ctctgtgctg ctgggcacct tcgtctttgg
     1501 gcagagcaca gctggggcct tggtggagct gctctgacgt gggctgacac agtcactcct
     1561 gcgtctggcc tgaagaccct gctgccctat ggactaagct ctgctcctcc tgtggctcac
     1621 tggaccctgg tgaggaagga ctgcggtgac aagttgcttt cacgtggtga ctcaggacag
     1681 tagaagccca tgctgctgaa agctagaatg cgagctggag agtagtgggc catgctgctt
     1741 cagaaggttc tggaaagctc ctcccacatc ctcctctggt gtccctgact tgtagatgtt
     1801 atcatcgtag tcacggggtc aacacctgcc ctgtgtgtcc tctcccaagc aggatgccag
     1861 ctacctagcc taggcccatc tctagttagt gagcgcttgt ctgcactggc tatgtctaaa
     1921 gatgtctgtc tttgttactg ttctattgct gtgcagagac acatgatcaa ggccactcag
     1981 agaagagttc attgggggct tacagtttca gagggttaga gtctgtggcc atcgtggtag
     2041 ggagcatggc gggcaggtgg gcgggcaggc atggtgctgg agtgtagctg agtgttccca
     2101 tcctcctctg caagctcaag acagcgcaca ctgggaatgg tgtgcacttt tgaaatctca
     2161 aagcctactc ccagggacac acctcctcca acaaggccac acctcctagt ccttcccaaa
     2221 cagttgagac caaccattca aatgtgagcc tcttggggcc gtttttattc aaaccgccat
     2281 attccactcc ctggccccca ttgcaaaatg cattcagtcc agcttcaaac gttcccattg
     2341 ttggggtttg acttcaggtt gtgtgaggga cgtaatgaat ttgagagaca agcgtgaaga
     2401 catctaacgt tgctatttct caggaagtaa atttggaatg tccacacatg tgggaaggga
     2461 gcacaggaat gcttgtgacc ttcctcgggc tctagaaaat agtaaacgag attctcatac
     2521 ctcagacatt tctctgatga cagataatac tgtcgtgttt ataaaaactt gaatatgcca
     2581 ggctgtgagg caggcttccc cgtaactgcc aactcctagc tctgttatca aag
//
