LOCUS       NM_130748               1946 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus solute carrier family 38, member 4 (Slc38a4),
            mRNA.
ACCESSION   NM_130748
VERSION     NM_130748.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1946)
  AUTHORS   Sugawara,M., Nakanishi,T., Fei,Y.J., Martindale,R.G.,
            Ganapathy,M.E., Leibach,F.H. and Ganapathy,V.
  TITLE     Structure and function of ATA3, a new subtype of amino acid
            transport system A, primarily expressed in the liver and skeletal
            muscle
  JOURNAL   Biochim Biophys Acta 1509 (1-2), 7-13 (2000)
   PUBMED   11118514
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF295535.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF295535.1, BC097292.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1946
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q35"
     gene            1..1946
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /note="solute carrier family 38, member 4"
                     /db_xref="GeneID:170573"
                     /db_xref="RGD:621836"
     exon            1..111
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            112..249
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     CDS             131..1774
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /note="amino acid transporter A3; system A amino acid
                     transporter 3; Na(+)-coupled neutral amino acid
                     transporter 4; amino acid transport system A3"
                     /codon_start=1
                     /product="sodium-coupled neutral amino acid transporter 4"
                     /protein_id="NP_570104.1"
                     /db_xref="GeneID:170573"
                     /db_xref="RGD:621836"
                     /translation="MDPIELRSVNIEPYEDSCSVDSIQSCYTGMGNSEKGAMDSQFAN
                     EDAESQKFLTNGFLGKKTLTDYADEHHPGTTSFGMSSFNLSNAIMGSGILGLSYAMAN
                     TGIVLFVIMLLTVAILSLYSVHLLLKTAKEGGSLIYEKLGEKAFGWPGKIGAFISITM
                     QNIGAMSSYLFIIKYELPEVIRVFMGLEENTGEWYLNGNYLVLFVSVGIILPLSLLKN
                     LGYLGYTSGFSLTCMVFFVSVVIYKKFQIPCPLPVLDHNNGNLTFNNTLPMHVIMLPN
                     NSESTGMNFMVDYTHRDPEGLDEKPAAGPLHGSGVEYEAHSGDKCQPKYFVFNSRTAY
                     AIPILAFAFVCHPEVLPIYSELKDRSRRKMQTVSNISITGMLVMYLLAALFGYLSFYG
                     EVEDELLHAYSKVYTFDTALLMVRLAVLVAVTLTVPIVLFPIRTSVITLLFPRRPFSW
                     VKHFGIAAIIIALNNVLVILVPTIKYIFGFIGASSATMLIFILPAAFYLKLVKKEPLR
                     SPQKIGALVFLVTGIIFMMGSMALIIIDWIYNPPNPDHH"
     exon            250..340
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            341..456
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            457..530
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            531..623
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            624..705
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            706..788
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            789..847
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            848..1123
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            1124..1203
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            1204..1304
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            1305..1429
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            1430..1574
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            1575..1672
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
     exon            1673..1918
                     /gene="Slc38a4"
                     /gene_synonym="Ata3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggatggaaa tttccactct ttaggaagcg taaagaaaag aaggaagggt ctctcactct
       61 cacccttgcc gccacatcca ttggattcca acccgaagaa ggtagaggcg ggaaagggct
      121 gtgaggtcaa atggacccca tagaactgag aagtgtcaac atcgaaccat acgaggacag
      181 ctgcagcgtg gatagcattc aaagctgcta caccgggatg gggaactccg agaagggagc
      241 catggacagt caatttgcta atgaagatgc cgaaagtcag aagttcctga cgaatggctt
      301 tttggggaag aagacgctaa ccgattacgc ggatgagcac caccctggaa cgacctcttt
      361 tggaatgtcc tcctttaacc tgagtaacgc catcatgggc agtggtatct tgggcttgtc
      421 ctacgccatg gccaacacgg ggatcgtcct ttttgtaatc atgcttctta ctgtggcaat
      481 tctatcgctc tactcggttc accttttact gaagacagcc aaggaaggag ggtctttgat
      541 ctatgaaaag ttgggagaga aggcgtttgg atggcctggg aaaattggag cctttatctc
      601 tattacaatg cagaacattg gagccatgtc aagctacctc ttcatcatta agtacgagct
      661 gcctgaagtg atcagagtgt tcatgggact tgaagaaaac actggggagt ggtacctcaa
      721 tggcaactac ctcgtcttat ttgtgtccgt ggggatcatc ctaccactct ctctccttaa
      781 aaatttaggc taccttggct acaccagtgg attttccctc acctgcatgg tgtttttcgt
      841 cagtgtggtg atttacaaaa agttccaaat accctgccct ctgcctgttc tggatcacaa
      901 taacgggaac ctgacgttca acaacacact tcccatgcac gtgatcatgc tacccaataa
      961 ctcggagagc acgggcatga acttcatggt ggactacact caccgagacc cggaagggct
     1021 ggatgagaag ccagccgcag gccctcttca cggcagtggt gtggagtacg aagcccacag
     1081 tggggacaaa tgtcaaccca agtactttgt attcaattcc cgcacggcct acgcgattcc
     1141 aatcctggcg tttgctttcg tctgccaccc tgaggtcctt cccatctaca gcgagcttaa
     1201 ggatcggtcc cggagaaaga tgcagacggt gtccaatatt tccattaccg ggatgctcgt
     1261 catgtacctg cttgctgcgc tctttggcta tctaagcttc tacggggaag ttgaggacga
     1321 gttgctccat gcctacagta aagtctacac atttgataca gctcttctca tggtacgcct
     1381 ggcagtgctg gtggcggtga cactgactgt gcccatcgtc ctgttcccca tccgtacttc
     1441 agtgatcaca ctgctgtttc caagaagacc cttcagctgg gtgaagcatt tcgggatcgc
     1501 tgcaatcatc atcgctctca acaacgtcct ggtcatcctc gtgcctacca tcaaatacat
     1561 ctttggattc ataggggctt cttctgccac catgctgatt ttcattcttc cggcagcttt
     1621 ttatctcaag cttgtcaaga aagaacccct tcgatcaccc caaaagattg gggctttggt
     1681 cttcctcgtg actggaatta tcttcatgat gggaagcatg gcgctcatta taatcgactg
     1741 gatttacaac cctccaaatc ccgaccacca ctaatccttg ggggggatgc tcttctattg
     1801 gaaacggccg acattatggt ctgaaggaca ctttagttgt cttggttggg atgttagtct
     1861 gaggaattaa cgagattccg aagacatttt ctagctctat catctgacgc atgtgaaaaa
     1921 aaaaaaaaaa aaaaaaaaaa aaaaaa
//
